BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ebv-miR-bart20-5p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
efu-miR-370 MIMAT0034931 Eptesicus fuscus miR-370 14 20
ssa-miR-24a-4-5p MIMAT0032554 Salmo salar miR-24a-4-5p 14 20
gga-miR-6566-3p MIMAT0025638 Gallus gallus miR-6566-3p 14 20
ssc-miR-370 MIMAT0025373 Sus scrofa miR-370 14 20
ggo-miR-370 MIMAT0024182 Gorilla gorilla miR-370 14 20
hsa-miR-4690-5p MIMAT0019779 Homo sapiens miR-4690-5p 14 20
oar-miR-370-3p MIMAT0019244 Ovis aries miR-370-3p 14 20
ssc-miR-1271 MIMAT0017967 Sus scrofa miR-1271 14 20
cin-miR-4001d-3p MIMAT0016453 Ciona intestinalis miR-4001d-3p 14 20
ppy-miR-370 MIMAT0015857 Pongo pygmaeus miR-370 14 20
tgu-miR-2984-5p MIMAT0014494 Taeniopygia guttata miR-2984-5p 14 20
eca-miR-370 MIMAT0013142 Equus caballus miR-370 14 20
cfa-miR-370 MIMAT0009889 Canis familiaris miR-370 14 20
bta-miR-370 MIMAT0009300 Bos taurus miR-370 14 20
ptr-miR-370 MIMAT0008120 Pan troglodytes miR-370 14 20
mml-miR-370-3p MIMAT0006295 Macaca mulatta miR-370-3p 14 20
ebv-miR-BART20-5p MIMAT0003719 Epstein Barr miR-BART20-5p 14 20
rlcv-miR-rL1-16-5p MIMAT0003447 Rhesus lymphocryptovirus miR-rL1... 14 20
rno-miR-370-3p MIMAT0003122 Rattus norvegicus miR-370-3p 14 20
mmu-miR-370-3p MIMAT0001095 Mus musculus miR-370-3p 14 20
hsa-miR-370-3p MIMAT0000722 Homo sapiens miR-370-3p 14 20
dvi-miR-252-3p MIMAT0035565 Drosophila virilis miR-252-3p 12 80
gsa-miR-153-5p MIMAT0035316 Gyrodactylus salaris miR-153-5p 12 80
gra-miR8692 MIMAT0034065 Gossypium raimondii miR8692 12 80
str-miR-86-3p MIMAT0033355 Strongyloides ratti miR-86-3p 12 80
ssa-miR-456-5p MIMAT0032645 Salmo salar miR-456-5p 12 80
ipu-miR-7565 MIMAT0029564 Ictalurus punctatus miR-7565 12 80
ipu-miR-214 MIMAT0029466 Ictalurus punctatus miR-214 12 80
aja-miR-214 MIMAT0031144 Artibeus jamaicensis miR-214 12 80
mmu-miR-7017-3p MIMAT0027939 Mus musculus miR-7017-3p 12 80
hsa-miR-6894-3p MIMAT0027689 Homo sapiens miR-6894-3p 12 80
hsa-miR-6811-5p MIMAT0027522 Homo sapiens miR-6811-5p 12 80
hsa-miR-6511b-5p MIMAT0025847 Homo sapiens miR-6511b-5p 12 80
rno-miR-6328 MIMAT0025067 Rattus norvegicus miR-6328 12 80
mml-miR-6132 MIMAT0024625 Macaca mulatta miR-6132 12 80
hsa-miR-6132 MIMAT0024616 Homo sapiens miR-6132 12 80
ptr-miR-6132 MIMAT0024606 Pan troglodytes miR-6132 12 80
mml-miR-1271-3p MIMAT0027108 Macaca mulatta miR-1271-3p 12 80
cgr-miR-1271 MIMAT0023747 Cricetulus griseus miR-1271 12 80
aca-miR-214-3p MIMAT0021872 Anolis carolinensis miR-214-3p 12 80
mtr-miR5229b MIMAT0021214 Medicago truncatula miR5229b 12 80
mtr-miR5229a MIMAT0021213 Medicago truncatula miR5229a 12 80
tca-miR-252a-3p MIMAT0018805 Tribolium castaneum miR-252a-3p 12 80
hsa-miR-3692-5p MIMAT0018121 Homo sapiens miR-3692-5p 12 80
hsa-miR-3665 MIMAT0018087 Homo sapiens miR-3665 12 80
hsa-miR-3619-5p MIMAT0017999 Homo sapiens miR-3619-5p 12 80
hsa-miR-4269 MIMAT0016897 Homo sapiens miR-4269 12 80
ppy-miR-596 MIMAT0016038 Pongo pygmaeus miR-596 12 80
tgu-miR-214-3p MIMAT0014603 Taeniopygia guttata miR-214-3p 12 80
tgu-miR-456-5p MIMAT0026964 Taeniopygia guttata miR-456-5p 12 80
cqu-miR-252-3p MIMAT0014374 Culex quinquefasciatus miR-252-3p 12 80
bta-miR-2895 MIMAT0013853 Bos taurus miR-2895 12 80
eca-miR-214 MIMAT0012963 Equus caballus miR-214 12 80
eca-miR-761 MIMAT0012923 Equus caballus miR-761 12 80
rno-miR-761 MIMAT0012853 Rattus norvegicus miR-761 12 80
ptr-miR-761 MIMAT0012817 Pan troglodytes miR-761 12 80
ptr-miR-596 MIMAT0012807 Pan troglodytes miR-596 12 80
mml-miR-761 MIMAT0012793 Macaca mulatta miR-761 12 80
mdo-miR-761 MIMAT0012768 Monodelphis domestica miR-761 12 80
bta-miR-2442 MIMAT0012017 Bos taurus miR-2442 12 80
bta-miR-2353 MIMAT0011889 Bos taurus miR-2353 12 80
bta-miR-2286 MIMAT0011793 Bos taurus miR-2286 12 80
bmo-miR-252-3p MIMAT0015293 Bombyx mori miR-252-3p 12 80
bfl-miR-2060 MIMAT0009986 Branchiostoma floridae miR-2060 12 80
cfa-miR-761 MIMAT0009936 Canis familiaris miR-761 12 80
cfa-miR-214 MIMAT0009847 Canis familiaris miR-214 12 80
bta-miR-761 MIMAT0009373 Bos taurus miR-761 12 80
gga-miR-214 MIMAT0007751 Gallus gallus miR-214 12 80
mml-miR-374b-3p MIMAT0026860 Macaca mulatta miR-374b-3p 12 80
gga-miR-1774 MIMAT0007685 Gallus gallus miR-1774 12 80
gga-miR-1623 MIMAT0007491 Gallus gallus miR-1623 12 80
oan-miR-1421ai-5p MIMAT0007305 Ornithorhynchus anatinus miR-1421... 12 80
oan-miR-1421z-5p MIMAT0007245 Ornithorhynchus anatinus miR-1421z-5p 12 80
oan-miR-214-3p MIMAT0007171 Ornithorhynchus anatinus miR-214-3p 12 80
mdo-miR-214-3p MIMAT0004130 Monodelphis domestica miR-214-3p 12 80
bta-miR-214 MIMAT0003825 Bos taurus miR-214 12 80
xtr-miR-214 MIMAT0003627 Xenopus tropicalis miR-214 12 80
mmu-miR-688 MIMAT0003467 Mus musculus miR-688 12 80
mmu-miR-683 MIMAT0003461 Mus musculus miR-683 12 80
mmu-miR-761 MIMAT0003893 Mus musculus miR-761 12 80
hsa-miR-761 MIMAT0010364 Homo sapiens miR-761 12 80
hsa-miR-596 MIMAT0003264 Homo sapiens miR-596 12 80
tni-miR-214 MIMAT0003027 Tetraodon nigroviridis miR-214 12 80
fru-miR-214 MIMAT0003026 Fugu rubripes miR-214 12 80
mml-miR-15a-3p MIMAT0026593 Macaca mulatta miR-15a-3p 12 80
mne-miR-214 MIMAT0002557 Macaca nemestrina miR-214 12 80
sla-miR-214 MIMAT0002556 Saguinus labiatus miR-214 12 80
mml-miR-214-3p MIMAT0002555 Macaca mulatta miR-214-3p 12 80
ptr-miR-214 MIMAT0002554 Pan troglodytes miR-214 12 80
ppy-miR-214 MIMAT0002553 Pongo pygmaeus miR-214 12 80
ppa-miR-214 MIMAT0002552 Pan paniscus miR-214 12 80
age-miR-214 MIMAT0002551 Ateles geoffroyi miR-214 12 80
ggo-miR-214 MIMAT0002550 Gorilla gorilla miR-214 12 80
ssc-miR-214 MIMAT0002147 Sus scrofa miR-214 12 80
dre-miR-214 MIMAT0001283 Danio rerio miR-214 12 80
rno-miR-214-3p MIMAT0000885 Rattus norvegicus miR-214-3p 12 80
mmu-miR-214-3p MIMAT0000661 Mus musculus miR-214-3p 12 80
hsa-miR-214-3p MIMAT0000271 Homo sapiens miR-214-3p 12 80
>efu-miR-370 MIMAT0034931 Eptesicus fuscus miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>ssa-miR-24a-4-5p MIMAT0032554 Salmo salar miR-24a-4-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 8 agcaggc 2
>gga-miR-6566-3p MIMAT0025638 Gallus gallus miR-6566-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 agcaggc 7
|||||||
Sbjct: 2 agcaggc 8
>ssc-miR-370 MIMAT0025373 Sus scrofa miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>ggo-miR-370 MIMAT0024182 Gorilla gorilla miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>hsa-miR-4690-5p MIMAT0019779 Homo sapiens miR-4690-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 agcaggc 7
|||||||
Sbjct: 2 agcaggc 8
>oar-miR-370-3p MIMAT0019244 Ovis aries miR-370-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>ssc-miR-1271 MIMAT0017967 Sus scrofa miR-1271
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 8 agcaggc 2
>cin-miR-4001d-3p MIMAT0016453 Ciona intestinalis miR-4001d-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>ppy-miR-370 MIMAT0015857 Pongo pygmaeus miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>tgu-miR-2984-5p MIMAT0014494 Taeniopygia guttata miR-2984-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 8 agcaggc 2
>eca-miR-370 MIMAT0013142 Equus caballus miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>cfa-miR-370 MIMAT0009889 Canis familiaris miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>bta-miR-370 MIMAT0009300 Bos taurus miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>ptr-miR-370 MIMAT0008120 Pan troglodytes miR-370
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>mml-miR-370-3p MIMAT0006295 Macaca mulatta miR-370-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>ebv-miR-BART20-5p MIMAT0003719 Epstein Barr miR-BART20-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 agcaggc 7
|||||||
Sbjct: 2 agcaggc 8
>rlcv-miR-rL1-16-5p MIMAT0003447 Rhesus lymphocryptovirus
miR-rL1-16-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 agcaggc 7
|||||||
Sbjct: 2 agcaggc 8
>rno-miR-370-3p MIMAT0003122 Rattus norvegicus miR-370-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>mmu-miR-370-3p MIMAT0001095 Mus musculus miR-370-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>hsa-miR-370-3p MIMAT0000722 Homo sapiens miR-370-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agcaggc 7
|||||||
Sbjct: 7 agcaggc 1
>dvi-miR-252-3p MIMAT0035565 Drosophila virilis miR-252-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>gsa-miR-153-5p MIMAT0035316 Gyrodactylus salaris miR-153-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>gra-miR8692 MIMAT0034065 Gossypium raimondii miR8692
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>str-miR-86-3p MIMAT0033355 Strongyloides ratti miR-86-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>ssa-miR-456-5p MIMAT0032645 Salmo salar miR-456-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 1 gcaggc 6
>ipu-miR-7565 MIMAT0029564 Ictalurus punctatus miR-7565
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 8 agcagg 3
>ipu-miR-214 MIMAT0029466 Ictalurus punctatus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>aja-miR-214 MIMAT0031144 Artibeus jamaicensis miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mmu-miR-7017-3p MIMAT0027939 Mus musculus miR-7017-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 8 agcagg 3
>hsa-miR-6894-3p MIMAT0027689 Homo sapiens miR-6894-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>hsa-miR-6811-5p MIMAT0027522 Homo sapiens miR-6811-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 3 gcaggc 8
>hsa-miR-6511b-5p MIMAT0025847 Homo sapiens miR-6511b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 3 gcaggc 8
>rno-miR-6328 MIMAT0025067 Rattus norvegicus miR-6328
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>mml-miR-6132 MIMAT0024625 Macaca mulatta miR-6132
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>hsa-miR-6132 MIMAT0024616 Homo sapiens miR-6132
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>ptr-miR-6132 MIMAT0024606 Pan troglodytes miR-6132
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>mml-miR-1271-3p MIMAT0027108 Macaca mulatta miR-1271-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>cgr-miR-1271 MIMAT0023747 Cricetulus griseus miR-1271
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>aca-miR-214-3p MIMAT0021872 Anolis carolinensis miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mtr-miR5229b MIMAT0021214 Medicago truncatula miR5229b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mtr-miR5229a MIMAT0021213 Medicago truncatula miR5229a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>tca-miR-252a-3p MIMAT0018805 Tribolium castaneum miR-252a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>hsa-miR-3692-5p MIMAT0018121 Homo sapiens miR-3692-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>hsa-miR-3665 MIMAT0018087 Homo sapiens miR-3665
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>hsa-miR-3619-5p MIMAT0017999 Homo sapiens miR-3619-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>hsa-miR-4269 MIMAT0016897 Homo sapiens miR-4269
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 1 gcaggc 6
>ppy-miR-596 MIMAT0016038 Pongo pygmaeus miR-596
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>tgu-miR-214-3p MIMAT0014603 Taeniopygia guttata miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>tgu-miR-456-5p MIMAT0026964 Taeniopygia guttata miR-456-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 1 gcaggc 6
>cqu-miR-252-3p MIMAT0014374 Culex quinquefasciatus miR-252-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>bta-miR-2895 MIMAT0013853 Bos taurus miR-2895
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>eca-miR-214 MIMAT0012963 Equus caballus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>eca-miR-761 MIMAT0012923 Equus caballus miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>rno-miR-761 MIMAT0012853 Rattus norvegicus miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ptr-miR-761 MIMAT0012817 Pan troglodytes miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ptr-miR-596 MIMAT0012807 Pan troglodytes miR-596
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>mml-miR-761 MIMAT0012793 Macaca mulatta miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mdo-miR-761 MIMAT0012768 Monodelphis domestica miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>bta-miR-2442 MIMAT0012017 Bos taurus miR-2442
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>bta-miR-2353 MIMAT0011889 Bos taurus miR-2353
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>bta-miR-2286 MIMAT0011793 Bos taurus miR-2286
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>bmo-miR-252-3p MIMAT0015293 Bombyx mori miR-252-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>bfl-miR-2060 MIMAT0009986 Branchiostoma floridae miR-2060
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>cfa-miR-761 MIMAT0009936 Canis familiaris miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>cfa-miR-214 MIMAT0009847 Canis familiaris miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>bta-miR-761 MIMAT0009373 Bos taurus miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>gga-miR-214 MIMAT0007751 Gallus gallus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mml-miR-374b-3p MIMAT0026860 Macaca mulatta miR-374b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>gga-miR-1774 MIMAT0007685 Gallus gallus miR-1774
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 8 agcagg 3
>gga-miR-1623 MIMAT0007491 Gallus gallus miR-1623
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 1 gcaggc 6
>oan-miR-1421ai-5p MIMAT0007305 Ornithorhynchus anatinus
miR-1421ai-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>oan-miR-1421z-5p MIMAT0007245 Ornithorhynchus anatinus
miR-1421z-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 1 agcagg 6
>oan-miR-214-3p MIMAT0007171 Ornithorhynchus anatinus miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mdo-miR-214-3p MIMAT0004130 Monodelphis domestica miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>bta-miR-214 MIMAT0003825 Bos taurus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>xtr-miR-214 MIMAT0003627 Xenopus tropicalis miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mmu-miR-688 MIMAT0003467 Mus musculus miR-688
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 3 gcaggc 8
>mmu-miR-683 MIMAT0003461 Mus musculus miR-683
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agcagg 6
||||||
Sbjct: 6 agcagg 1
>mmu-miR-761 MIMAT0003893 Mus musculus miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>hsa-miR-761 MIMAT0010364 Homo sapiens miR-761
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>hsa-miR-596 MIMAT0003264 Homo sapiens miR-596
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gcaggc 7
||||||
Sbjct: 8 gcaggc 3
>tni-miR-214 MIMAT0003027 Tetraodon nigroviridis miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>fru-miR-214 MIMAT0003026 Fugu rubripes miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mml-miR-15a-3p MIMAT0026593 Macaca mulatta miR-15a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gcaggc 7
||||||
Sbjct: 1 gcaggc 6
>mne-miR-214 MIMAT0002557 Macaca nemestrina miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>sla-miR-214 MIMAT0002556 Saguinus labiatus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mml-miR-214-3p MIMAT0002555 Macaca mulatta miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ptr-miR-214 MIMAT0002554 Pan troglodytes miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ppy-miR-214 MIMAT0002553 Pongo pygmaeus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ppa-miR-214 MIMAT0002552 Pan paniscus miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>age-miR-214 MIMAT0002551 Ateles geoffroyi miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ggo-miR-214 MIMAT0002550 Gorilla gorilla miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>ssc-miR-214 MIMAT0002147 Sus scrofa miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>dre-miR-214 MIMAT0001283 Danio rerio miR-214
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>rno-miR-214-3p MIMAT0000885 Rattus norvegicus miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>mmu-miR-214-3p MIMAT0000661 Mus musculus miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
>hsa-miR-214-3p MIMAT0000271 Homo sapiens miR-214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agcagg 6
||||||
Sbjct: 3 agcagg 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 136
Number of extensions: 115
Number of successful extensions: 98
Number of sequences better than 100.0: 98
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 98
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
