BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= hbv-miR-b22-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
hbv-miR-B22-3p MIMAT0031773 Herpes B miR-B22-3p 14 20
oan-miR-7422b-5p MIMAT0029022 Ornithorhynchus anatinus miR-7422b-5p 14 20
mmu-miR-7076-5p MIMAT0028058 Mus musculus miR-7076-5p 14 20
mmu-miR-7072-5p MIMAT0028050 Mus musculus miR-7072-5p 14 20
mmu-miR-6986-5p MIMAT0027874 Mus musculus miR-6986-5p 14 20
hsa-miR-6826-3p MIMAT0027553 Homo sapiens miR-6826-3p 14 20
bta-miR-2382-5p MIMAT0011930 Bos taurus miR-2382-5p 14 20
bta-miR-2343 MIMAT0011878 Bos taurus miR-2343 14 20
tca-miR-14-5p MIMAT0019105 Tribolium castaneum miR-14-5p 14 20
efu-miR-9290 MIMAT0034948 Eptesicus fuscus miR-9290 12 80
efu-miR-9246c MIMAT0034863 Eptesicus fuscus miR-9246c 12 80
eca-miR-8966 MIMAT0034501 Equus caballus miR-8966 12 80
ssa-miR-30e-3-3p MIMAT0032613 Salmo salar miR-30e-3-3p 12 80
mmu-miR-8093 MIMAT0031394 Mus musculus miR-8093 12 80
mdo-miR-505-5p MIMAT0028662 Monodelphis domestica miR-505-5p 12 80
hsa-miR-7111-5p MIMAT0028119 Homo sapiens miR-7111-5p 12 80
mmu-miR-7045-3p MIMAT0027995 Mus musculus miR-7045-3p 12 80
mmu-miR-7000-5p MIMAT0027902 Mus musculus miR-7000-5p 12 80
mmu-miR-6979-5p MIMAT0027860 Mus musculus miR-6979-5p 12 80
mmu-miR-6971-5p MIMAT0027844 Mus musculus miR-6971-5p 12 80
mmu-miR-6928-5p MIMAT0027756 Mus musculus miR-6928-5p 12 80
mmu-miR-6925-3p MIMAT0027751 Mus musculus miR-6925-3p 12 80
hsa-miR-6889-5p MIMAT0027678 Homo sapiens miR-6889-5p 12 80
hsa-miR-6887-3p MIMAT0027675 Homo sapiens miR-6887-3p 12 80
hsa-miR-6870-5p MIMAT0027640 Homo sapiens miR-6870-5p 12 80
hsa-miR-6824-5p MIMAT0027548 Homo sapiens miR-6824-5p 12 80
hsa-miR-6810-3p MIMAT0027521 Homo sapiens miR-6810-3p 12 80
hsa-miR-6799-5p MIMAT0027498 Homo sapiens miR-6799-5p 12 80
hsa-miR-6777-5p MIMAT0027454 Homo sapiens miR-6777-5p 12 80
hsa-miR-6763-3p MIMAT0027427 Homo sapiens miR-6763-3p 12 80
hsa-miR-6763-5p MIMAT0027426 Homo sapiens miR-6763-5p 12 80
hsa-miR-6756-3p MIMAT0027413 Homo sapiens miR-6756-3p 12 80
gga-miR-6562-5p MIMAT0025832 Gallus gallus miR-6562-5p 12 80
mmu-miR-6418-5p MIMAT0025173 Mus musculus miR-6418-5p 12 80
cca-miR6107 MIMAT0024541 Cynara cardunculus miR6107 12 80
hsa-miR-6090 MIMAT0023715 Homo sapiens miR-6090 12 80
hsa-miR-5698 MIMAT0022491 Homo sapiens miR-5698 12 80
mtr-miR5276 MIMAT0021314 Medicago truncatula miR5276 12 80
gma-miR5043 MIMAT0021074 Glycine max miR5043 12 80
hsa-miR-4723-5p MIMAT0019838 Homo sapiens miR-4723-5p 12 80
hsa-miR-4652-5p MIMAT0019716 Homo sapiens miR-4652-5p 12 80
mmu-miR-3971 MIMAT0019356 Mus musculus miR-3971 12 80
ame-miR-3718a MIMAT0018520 Apis mellifera miR-3718a 12 80
cin-miR-4005b-3p MIMAT0016468 Ciona intestinalis miR-4005b-3p 12 80
hsa-miR-3150a-3p MIMAT0015023 Homo sapiens miR-3150a-3p 12 80
hsa-miR-3144-5p MIMAT0015014 Homo sapiens miR-3144-5p 12 80
hsa-miR-3127-3p MIMAT0019201 Homo sapiens miR-3127-3p 12 80
mmu-miR-3092-5p MIMAT0014905 Mus musculus miR-3092-5p 12 80
tgu-miR-2962-3p MIMAT0014621 Taeniopygia guttata miR-2962-3p 12 80
bta-miR-2394 MIMAT0011947 Bos taurus miR-2394 12 80
ppc-miR-2247 MIMAT0011735 Pristionchus pacificus miR-2247 12 80
ptr-miR-920 MIMAT0008336 Pan troglodytes miR-920 12 80
mmu-miR-1894-5p MIMAT0007877 Mus musculus miR-1894-5p 12 80
mml-miR-920 MIMAT0006532 Macaca mulatta miR-920 12 80
mml-miR-612 MIMAT0006464 Macaca mulatta miR-612 12 80
mml-miR-505-5p MIMAT0026892 Macaca mulatta miR-505-5p 12 80
gga-miR-1773-5p MIMAT0007683 Gallus gallus miR-1773-5p 12 80
mcmv-miR-m21-1 MIMAT0005540 Mouse cytomegalovirus miR-m21-1 12 80
ppt-miR1039-3p MIMAT0005149 Physcomitrella patens miR1039-3p 12 80
hsa-miR-920 MIMAT0004970 Homo sapiens miR-920 12 80
ath-miR853 MIMAT0004276 Arabidopsis thaliana miR853 12 80
kshv-miR-K12-12-3p MIMAT0015238 Kaposi sarcoma-associated miR-K1... 12 80
>hbv-miR-B22-3p MIMAT0031773 Herpes B miR-B22-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 2 aggggag 8
>oan-miR-7422b-5p MIMAT0029022 Ornithorhynchus anatinus
miR-7422b-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 1 aggggag 7
>mmu-miR-7076-5p MIMAT0028058 Mus musculus miR-7076-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 1 aggggag 7
>mmu-miR-7072-5p MIMAT0028050 Mus musculus miR-7072-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 2 aggggag 8
>mmu-miR-6986-5p MIMAT0027874 Mus musculus miR-6986-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 1 aggggag 7
>hsa-miR-6826-3p MIMAT0027553 Homo sapiens miR-6826-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aggggag 7
|||||||
Sbjct: 7 aggggag 1
>bta-miR-2382-5p MIMAT0011930 Bos taurus miR-2382-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 1 aggggag 7
>bta-miR-2343 MIMAT0011878 Bos taurus miR-2343
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 2 aggggag 8
>tca-miR-14-5p MIMAT0019105 Tribolium castaneum miR-14-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aggggag 7
|||||||
Sbjct: 1 aggggag 7
>efu-miR-9290 MIMAT0034948 Eptesicus fuscus miR-9290
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 8 ggggag 3
>efu-miR-9246c MIMAT0034863 Eptesicus fuscus miR-9246c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>eca-miR-8966 MIMAT0034501 Equus caballus miR-8966
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>ssa-miR-30e-3-3p MIMAT0032613 Salmo salar miR-30e-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mmu-miR-8093 MIMAT0031394 Mus musculus miR-8093
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mdo-miR-505-5p MIMAT0028662 Monodelphis domestica miR-505-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>hsa-miR-7111-5p MIMAT0028119 Homo sapiens miR-7111-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mmu-miR-7045-3p MIMAT0027995 Mus musculus miR-7045-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 7 ggggag 2
>mmu-miR-7000-5p MIMAT0027902 Mus musculus miR-7000-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>mmu-miR-6979-5p MIMAT0027860 Mus musculus miR-6979-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>mmu-miR-6971-5p MIMAT0027844 Mus musculus miR-6971-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mmu-miR-6928-5p MIMAT0027756 Mus musculus miR-6928-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>mmu-miR-6925-3p MIMAT0027751 Mus musculus miR-6925-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>hsa-miR-6889-5p MIMAT0027678 Homo sapiens miR-6889-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>hsa-miR-6887-3p MIMAT0027675 Homo sapiens miR-6887-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>hsa-miR-6870-5p MIMAT0027640 Homo sapiens miR-6870-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>hsa-miR-6824-5p MIMAT0027548 Homo sapiens miR-6824-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 3 agggga 8
>hsa-miR-6810-3p MIMAT0027521 Homo sapiens miR-6810-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>hsa-miR-6799-5p MIMAT0027498 Homo sapiens miR-6799-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>hsa-miR-6777-5p MIMAT0027454 Homo sapiens miR-6777-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>hsa-miR-6763-3p MIMAT0027427 Homo sapiens miR-6763-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 6 ggggag 1
>hsa-miR-6763-5p MIMAT0027426 Homo sapiens miR-6763-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>hsa-miR-6756-3p MIMAT0027413 Homo sapiens miR-6756-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>gga-miR-6562-5p MIMAT0025832 Gallus gallus miR-6562-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>mmu-miR-6418-5p MIMAT0025173 Mus musculus miR-6418-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 3 agggga 8
>cca-miR6107 MIMAT0024541 Cynara cardunculus miR6107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 3 agggga 8
>hsa-miR-6090 MIMAT0023715 Homo sapiens miR-6090
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>hsa-miR-5698 MIMAT0022491 Homo sapiens miR-5698
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mtr-miR5276 MIMAT0021314 Medicago truncatula miR5276
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>gma-miR5043 MIMAT0021074 Glycine max miR5043
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 8 agggga 3
>hsa-miR-4723-5p MIMAT0019838 Homo sapiens miR-4723-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>hsa-miR-4652-5p MIMAT0019716 Homo sapiens miR-4652-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>mmu-miR-3971 MIMAT0019356 Mus musculus miR-3971
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 6 ggggag 1
>ame-miR-3718a MIMAT0018520 Apis mellifera miR-3718a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>cin-miR-4005b-3p MIMAT0016468 Ciona intestinalis miR-4005b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 3 agggga 8
>hsa-miR-3150a-3p MIMAT0015023 Homo sapiens miR-3150a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>hsa-miR-3144-5p MIMAT0015014 Homo sapiens miR-3144-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>hsa-miR-3127-3p MIMAT0019201 Homo sapiens miR-3127-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>mmu-miR-3092-5p MIMAT0014905 Mus musculus miR-3092-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 1 agggga 6
>tgu-miR-2962-3p MIMAT0014621 Taeniopygia guttata miR-2962-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 8 agggga 3
>bta-miR-2394 MIMAT0011947 Bos taurus miR-2394
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 8 ggggag 3
>ppc-miR-2247 MIMAT0011735 Pristionchus pacificus miR-2247
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 7 ggggag 2
>ptr-miR-920 MIMAT0008336 Pan troglodytes miR-920
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>mmu-miR-1894-5p MIMAT0007877 Mus musculus miR-1894-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ggggag 7
||||||
Sbjct: 8 ggggag 3
>mml-miR-920 MIMAT0006532 Macaca mulatta miR-920
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>mml-miR-612 MIMAT0006464 Macaca mulatta miR-612
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mml-miR-505-5p MIMAT0026892 Macaca mulatta miR-505-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>gga-miR-1773-5p MIMAT0007683 Gallus gallus miR-1773-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
>mcmv-miR-m21-1 MIMAT0005540 Mouse cytomegalovirus miR-m21-1
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 agggga 6
||||||
Sbjct: 3 agggga 8
>ppt-miR1039-3p MIMAT0005149 Physcomitrella patens miR1039-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>hsa-miR-920 MIMAT0004970 Homo sapiens miR-920
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 1 ggggag 6
>ath-miR853 MIMAT0004276 Arabidopsis thaliana miR853
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 agggga 6
||||||
Sbjct: 6 agggga 1
>kshv-miR-K12-12-3p MIMAT0015238 Kaposi sarcoma-associated
miR-K12-12-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ggggag 7
||||||
Sbjct: 3 ggggag 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 102
Number of extensions: 93
Number of successful extensions: 62
Number of sequences better than 100.0: 62
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 62
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
