BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tumv-miR-s71
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

chi-miR-410-3p MIMAT0036212 Capra hircus miR-410-3p                    14      20
mdm-miR7120b MIMAT0026038 Malus domestica miR7120b                     14      20
mdm-miR7120a MIMAT0026037 Malus domestica miR7120a                     14      20
ggo-miR-410 MIMAT0024121 Gorilla gorilla miR-410                       14      20
cgr-miR-410-3p MIMAT0023953 Cricetulus griseus miR-410-3p              14      20
hco-miR-5890c MIMAT0023378 Haemonchus contortus miR-5890c              14      20
cel-miR-4922 MIMAT0020128 Caenorhabditis elegans miR-4922              14      20
oar-miR-410-3p MIMAT0019334 Ovis aries miR-410-3p                      14      20
tca-miR-3902-5p MIMAT0018908 Tribolium castaneum miR-3902-5p           14      20
rno-miR-344b-1-3p MIMAT0017894 Rattus norvegicus miR-344b-1-3p         14      20
ppy-miR-410 MIMAT0015877 Pongo pygmaeus miR-410                        14      20
mmu-miR-344e-3p MIMAT0014924 Mus musculus miR-344e-3p                  14      20
eca-miR-410 MIMAT0013153 Equus caballus miR-410                        14      20
bta-miR-410 MIMAT0009311 Bos taurus miR-410                            14      20
ptr-miR-410 MIMAT0008137 Pan troglodytes miR-410                       14      20
cfa-miR-410 MIMAT0006728 Canis familiaris miR-410                      14      20
mml-miR-410-3p MIMAT0006316 Macaca mulatta miR-410-3p                  14      20
rno-miR-410-3p MIMAT0005311 Rattus norvegicus miR-410-3p               14      20
mmu-miR-344d-3p MIMAT0014808 Mus musculus miR-344d-3p                  14      20
hsa-miR-410-3p MIMAT0002171 Homo sapiens miR-410-3p                    14      20
mmu-miR-410-3p MIMAT0001091 Mus musculus miR-410-3p                    14      20
oha-miR-2985b-3p MIMAT0036875 Ophiophagus hannah miR-2985b-3p          12      80
oha-miR-2985a-3p MIMAT0036873 Ophiophagus hannah miR-2985a-3p          12      80
oha-miR-2985a-2-3p MIMAT0036872 Ophiophagus hannah miR-2985a-2-3p      12      80
tch-miR-374b-5p MIMAT0036583 Tupaia chinensis miR-374b-5p              12      80
chi-miR-374b-5p MIMAT0036182 Capra hircus miR-374b-5p                  12      80
tae-miR1120c-5p MIMAT0035799 Triticum aestivum miR1120c-5p             12      80
tae-miR1130b-3p MIMAT0035796 Triticum aestivum miR1130b-3p             12      80
stu-miR8043 MIMAT0030957 Solanum tuberosum miR8043                     12      80
oar-miR-374b MIMAT0030063 Ovis aries miR-374b                          12      80
ghr-miR7499 MIMAT0029146 Gossypium hirsutum miR7499                    12      80
oan-miR-7421-3p MIMAT0028993 Ornithorhynchus anatinus miR-7421-3p      12      80
oan-miR-2985-3p MIMAT0028957 Ornithorhynchus anatinus miR-2985-3p      12      80
mdo-miR-7374a-3p MIMAT0028795 Monodelphis domestica miR-7374a-3p       12      80
mmu-miR-7210-3p MIMAT0028389 Mus musculus miR-7210-3p                  12      80
bma-miR-5878 MIMAT0026377 Brugia malayi miR-5878                       12      80
mmu-miR-6374 MIMAT0025118 Mus musculus miR-6374                        12      80
ggo-miR-374b MIMAT0024126 Gorilla gorilla miR-374b                     12      80
cgr-miR-374-5p MIMAT0023939 Cricetulus griseus miR-374-5p              12      80
mmu-miR-344h-3p MIMAT0022384 Mus musculus miR-344h-3p                  12      80
cel-miR-4811-3p MIMAT0019997 Caenorhabditis elegans miR-4811-3p        12      80
pma-let-7b-3p MIMAT0019566 Petromyzon marinus let-7b-3p                12      80
tca-miR-3902-3p MIMAT0018909 Tribolium castaneum miR-3902-3p           12      80
ame-miR-3778 MIMAT0018555 Apis mellifera miR-3778                      12      80
cin-miR-4097-5p MIMAT0016678 Ciona intestinalis miR-4097-5p            12      80
rno-miR-2985 MIMAT0017891 Rattus norvegicus miR-2985                   12      80
rno-miR-344b-3p MIMAT0017812 Rattus norvegicus miR-344b-3p             12      80
aly-miR2112-3p MIMAT0017662 Arabidopsis lyrata miR2112-3p              12      80
ssc-miR-374b-5p MIMAT0013915 Sus scrofa miR-374b-5p                    12      80
eca-miR-374b MIMAT0013214 Equus caballus miR-374b                      12      80
dps-miR-2540-3p MIMAT0012337 Drosophila pseudoobscura miR-2540-3p      12      80
sme-miR-2164-5p MIMAT0012156 Schmidtea mediterranea miR-2164-5p        12      80
ath-miR2112-3p MIMAT0011155 Arabidopsis thaliana miR2112-3p            12      80
bta-miR-374b MIMAT0009302 Bos taurus miR-374b                          12      80
ptr-miR-374b MIMAT0008124 Pan troglodytes miR-374b                     12      80
cfa-miR-374b MIMAT0006754 Canis familiaris miR-374b                    12      80
mml-miR-607 MIMAT0006461 Macaca mulatta miR-607                        12      80
mml-miR-374b-5p MIMAT0006301 Macaca mulatta miR-374b-5p                12      80
dme-miR-974-3p MIMAT0020871 Drosophila melanogaster miR-974-3p         12      80
hsa-miR-374b-5p MIMAT0004955 Homo sapiens miR-374b-5p                  12      80
mmu-miR-374b-5p MIMAT0003727 Mus musculus miR-374b-5p                  12      80
rno-miR-374-5p MIMAT0003208 Rattus norvegicus miR-374-5p               12      80
>chi-miR-410-3p MIMAT0036212 Capra hircus miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>mdm-miR7120b MIMAT0026038 Malus domestica miR7120b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 atataac 7
         |||||||
Sbjct: 8 atataac 2
>mdm-miR7120a MIMAT0026037 Malus domestica miR7120a
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 atataac 7
         |||||||
Sbjct: 8 atataac 2
>ggo-miR-410 MIMAT0024121 Gorilla gorilla miR-410
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>cgr-miR-410-3p MIMAT0023953 Cricetulus griseus miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>hco-miR-5890c MIMAT0023378 Haemonchus contortus miR-5890c
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>cel-miR-4922 MIMAT0020128 Caenorhabditis elegans miR-4922
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>oar-miR-410-3p MIMAT0019334 Ovis aries miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>tca-miR-3902-5p MIMAT0018908 Tribolium castaneum miR-3902-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 1 atataac 7
>rno-miR-344b-1-3p MIMAT0017894 Rattus norvegicus miR-344b-1-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>ppy-miR-410 MIMAT0015877 Pongo pygmaeus miR-410
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>mmu-miR-344e-3p MIMAT0014924 Mus musculus miR-344e-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>eca-miR-410 MIMAT0013153 Equus caballus miR-410
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>bta-miR-410 MIMAT0009311 Bos taurus miR-410
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>ptr-miR-410 MIMAT0008137 Pan troglodytes miR-410
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>cfa-miR-410 MIMAT0006728 Canis familiaris miR-410
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>mml-miR-410-3p MIMAT0006316 Macaca mulatta miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>rno-miR-410-3p MIMAT0005311 Rattus norvegicus miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>mmu-miR-344d-3p MIMAT0014808 Mus musculus miR-344d-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>hsa-miR-410-3p MIMAT0002171 Homo sapiens miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>mmu-miR-410-3p MIMAT0001091 Mus musculus miR-410-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 atataac 7
         |||||||
Sbjct: 2 atataac 8
>oha-miR-2985b-3p MIMAT0036875 Ophiophagus hannah miR-2985b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 7 tataac 2
>oha-miR-2985a-3p MIMAT0036873 Ophiophagus hannah miR-2985a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 7 tataac 2
>oha-miR-2985a-2-3p MIMAT0036872 Ophiophagus hannah
         miR-2985a-2-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 7 tataac 2
>tch-miR-374b-5p MIMAT0036583 Tupaia chinensis miR-374b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>chi-miR-374b-5p MIMAT0036182 Capra hircus miR-374b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>tae-miR1120c-5p MIMAT0035799 Triticum aestivum miR1120c-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 3 atataa 8
>tae-miR1130b-3p MIMAT0035796 Triticum aestivum miR1130b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 8 atataa 3
>stu-miR8043 MIMAT0030957 Solanum tuberosum miR8043
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 3 atataa 8
>oar-miR-374b MIMAT0030063 Ovis aries miR-374b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>ghr-miR7499 MIMAT0029146 Gossypium hirsutum miR7499
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>oan-miR-7421-3p MIMAT0028993 Ornithorhynchus anatinus
         miR-7421-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 6 atataa 1
>oan-miR-2985-3p MIMAT0028957 Ornithorhynchus anatinus
         miR-2985-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 7 tataac 2
>mdo-miR-7374a-3p MIMAT0028795 Monodelphis domestica
         miR-7374a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 3 atataa 8
>mmu-miR-7210-3p MIMAT0028389 Mus musculus miR-7210-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 6 atataa 1
>bma-miR-5878 MIMAT0026377 Brugia malayi miR-5878
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 6 atataa 1
>mmu-miR-6374 MIMAT0025118 Mus musculus miR-6374
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 8 tataac 3
>ggo-miR-374b MIMAT0024126 Gorilla gorilla miR-374b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>cgr-miR-374-5p MIMAT0023939 Cricetulus griseus miR-374-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>mmu-miR-344h-3p MIMAT0022384 Mus musculus miR-344h-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tataac 7
         ||||||
Sbjct: 3 tataac 8
>cel-miR-4811-3p MIMAT0019997 Caenorhabditis elegans miR-4811-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tataac 7
         ||||||
Sbjct: 1 tataac 6
>pma-let-7b-3p MIMAT0019566 Petromyzon marinus let-7b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 3 atataa 8
>tca-miR-3902-3p MIMAT0018909 Tribolium castaneum miR-3902-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>ame-miR-3778 MIMAT0018555 Apis mellifera miR-3778
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 3 atataa 8
>cin-miR-4097-5p MIMAT0016678 Ciona intestinalis miR-4097-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 3 atataa 8
>rno-miR-2985 MIMAT0017891 Rattus norvegicus miR-2985
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 7 tataac 2
>rno-miR-344b-3p MIMAT0017812 Rattus norvegicus miR-344b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tataac 7
         ||||||
Sbjct: 3 tataac 8
>aly-miR2112-3p MIMAT0017662 Arabidopsis lyrata miR2112-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 8 atataa 3
>ssc-miR-374b-5p MIMAT0013915 Sus scrofa miR-374b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>eca-miR-374b MIMAT0013214 Equus caballus miR-374b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>dps-miR-2540-3p MIMAT0012337 Drosophila pseudoobscura
         miR-2540-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 7 tataac 2
>sme-miR-2164-5p MIMAT0012156 Schmidtea mediterranea miR-2164-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 6 atataa 1
>ath-miR2112-3p MIMAT0011155 Arabidopsis thaliana miR2112-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 atataa 6
         ||||||
Sbjct: 8 atataa 3
>bta-miR-374b MIMAT0009302 Bos taurus miR-374b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>ptr-miR-374b MIMAT0008124 Pan troglodytes miR-374b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>cfa-miR-374b MIMAT0006754 Canis familiaris miR-374b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>mml-miR-607 MIMAT0006461 Macaca mulatta miR-607
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tataac 7
         ||||||
Sbjct: 6 tataac 1
>mml-miR-374b-5p MIMAT0006301 Macaca mulatta miR-374b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>dme-miR-974-3p MIMAT0020871 Drosophila melanogaster miR-974-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tataac 7
         ||||||
Sbjct: 1 tataac 6
>hsa-miR-374b-5p MIMAT0004955 Homo sapiens miR-374b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>mmu-miR-374b-5p MIMAT0003727 Mus musculus miR-374b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
>rno-miR-374-5p MIMAT0003208 Rattus norvegicus miR-374-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 atataa 6
         ||||||
Sbjct: 1 atataa 6
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 89
Number of extensions: 68
Number of successful extensions: 62
Number of sequences better than 100.0: 62
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 62
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)