BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= dev-miR-d19-5p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ppc-miR-8293-3p MIMAT0033100 Pristionchus pacificus miR-8293-3p 14 20
dev-miR-D19-5p MIMAT0028194 Duck enteritis miR-D19-5p 14 20
mtr-miR2628 MIMAT0013362 Medicago truncatula miR2628 14 20
oha-miR-30d-3p MIMAT0036896 Ophiophagus hannah miR-30d-3p 12 80
oha-miR-30a-3p MIMAT0036889 Ophiophagus hannah miR-30a-3p 12 80
oha-miR-30e-3p MIMAT0036887 Ophiophagus hannah miR-30e-3p 12 80
gma-miR9736 MIMAT0036356 Glycine max miR9736 12 80
chi-miR-335-3p MIMAT0036148 Capra hircus miR-335-3p 12 80
chi-miR-30e-3p MIMAT0036129 Capra hircus miR-30e-3p 12 80
chi-miR-30a-3p MIMAT0036122 Capra hircus miR-30a-3p 12 80
bra-miR9408-3p MIMAT0035658 Brassica rapa miR9408-3p 12 80
gsa-miR-71b-5p MIMAT0035250 Gyrodactylus salaris miR-71b-5p 12 80
gsa-miR-71a-5p MIMAT0035246 Gyrodactylus salaris miR-71a-5p 12 80
efu-miR-30d MIMAT0035071 Eptesicus fuscus miR-30d 12 80
efu-miR-9286 MIMAT0034940 Eptesicus fuscus miR-9286 12 80
eca-miR-9110 MIMAT0034659 Equus caballus miR-9110 12 80
gra-miR7504j MIMAT0034247 Gossypium raimondii miR7504j 12 80
gra-miR7504i MIMAT0034101 Gossypium raimondii miR7504i 12 80
str-miR-8397-3p MIMAT0033489 Strongyloides ratti miR-8397-3p 12 80
str-miR-124-5p MIMAT0033438 Strongyloides ratti miR-124-5p 12 80
str-miR-71-5p MIMAT0033317 Strongyloides ratti miR-71-5p 12 80
ppc-miR-8358-5p MIMAT0033278 Pristionchus pacificus miR-8358-5p 12 80
ppc-miR-8298-5p MIMAT0033113 Pristionchus pacificus miR-8298-5p 12 80
ppc-miR-8295-5p MIMAT0033103 Pristionchus pacificus miR-8295-5p 12 80
ppc-miR-8288-3p MIMAT0033086 Pristionchus pacificus miR-8288-3p 12 80
ssa-miR-30d-3p MIMAT0032609 Salmo salar miR-30d-3p 12 80
ssa-miR-30c-3p MIMAT0032607 Salmo salar miR-30c-3p 12 80
ssa-miR-30b-3p MIMAT0032605 Salmo salar miR-30b-3p 12 80
bbe-miR-71-5p MIMAT0031717 Branchiostoma belcheri miR-71-5p 12 80
stu-miR8020 MIMAT0030919 Solanum tuberosum miR8020 12 80
stu-miR1886g-3p MIMAT0031194 Solanum tuberosum miR1886g-3p 12 80
prd-miR-71-5p MIMAT0030460 Panagrellus redivivus miR-71-5p 12 80
oar-miR-30a-3p MIMAT0030056 Ovis aries miR-30a-3p 12 80
lva-miR-71-5p MIMAT0032200 Lytechinus variegatus miR-71-5p 12 80
pmi-miR-71-5p MIMAT0032150 Patiria miniata miR-71-5p 12 80
mmu-miR-7675-3p MIMAT0029859 Mus musculus miR-7675-3p 12 80
crm-miR-2229b MIMAT0029649 Caenorhabditis remanei miR-2229b 12 80
crm-miR-2229a MIMAT0029648 Caenorhabditis remanei miR-2229a 12 80
ipu-miR-30e MIMAT0029500 Ictalurus punctatus miR-30e 12 80
ipu-miR-30d MIMAT0029499 Ictalurus punctatus miR-30d 12 80
ipu-miR-30a MIMAT0029496 Ictalurus punctatus miR-30a 12 80
mdo-miR-7275-5p MIMAT0028524 Monodelphis domestica miR-7275-5p 12 80
mml-miR-4766-5p MIMAT0028238 Macaca mulatta miR-4766-5p 12 80
mmu-miR-7043-5p MIMAT0027990 Mus musculus miR-7043-5p 12 80
mmu-miR-6984-5p MIMAT0027870 Mus musculus miR-6984-5p 12 80
sma-miR-71b-5p MIMAT0025043 Schistosoma mansoni miR-71b-5p 12 80
pgi-miR6137b MIMAT0027258 Panax ginseng miR6137b 12 80
pgi-miR6137a MIMAT0027257 Panax ginseng miR6137a 12 80
cca-miR6114-5p MIMAT0024553 Cynara cardunculus miR6114-5p 12 80
mse-miR-71 MIMAT0024481 Manduca sexta miR-71 12 80
cgr-miR-30e-3p MIMAT0023901 Cricetulus griseus miR-30e-3p 12 80
cgr-miR-30d MIMAT0023899 Cricetulus griseus miR-30d 12 80
cgr-miR-30a-3p MIMAT0023895 Cricetulus griseus miR-30a-3p 12 80
hco-miR-5964 MIMAT0023469 Haemonchus contortus miR-5964 12 80
hco-miR-5944 MIMAT0023443 Haemonchus contortus miR-5944 12 80
hco-miR-5905 MIMAT0023359 Haemonchus contortus miR-5905 12 80
hco-miR-71 MIMAT0023358 Haemonchus contortus miR-71 12 80
ola-miR-30a-3p MIMAT0022667 Oryzias latipes miR-30a-3p 12 80
ola-miR-30d-3p MIMAT0022600 Oryzias latipes miR-30d-3p 12 80
ola-miR-30e MIMAT0022597 Oryzias latipes miR-30e 12 80
tur-miR-71-5p MIMAT0023040 Tetranychus urticae miR-71-5p 12 80
aca-miR-5444a MIMAT0022066 Anolis carolinensis miR-5444a 12 80
aca-miR-30e-3p MIMAT0021929 Anolis carolinensis miR-30e-3p 12 80
aca-miR-30a-3p MIMAT0021921 Anolis carolinensis miR-30a-3p 12 80
gma-miR5379 MIMAT0021620 Glycine max miR5379 12 80
asu-miR-71-5p MIMAT0021466 Ascaris suum miR-71-5p 12 80
gma-miR5041-5p MIMAT0021070 Glycine max miR5041-5p 12 80
emu-miR-71 MIMAT0020263 Echinococcus multilocularis miR-71 12 80
egr-miR-71 MIMAT0020237 Echinococcus granulosus miR-71 12 80
dme-miR-4963-5p MIMAT0020185 Drosophila melanogaster miR-4963-5p 12 80
hsa-miR-4766-5p MIMAT0019917 Homo sapiens miR-4766-5p 12 80
pma-miR-30e-3p MIMAT0019429 Petromyzon marinus miR-30e-3p 12 80
gma-miR4374b MIMAT0018282 Glycine max miR4374b 12 80
ame-miR-3783 MIMAT0018561 Apis mellifera miR-3783 12 80
aly-miR4222 MIMAT0017910 Arabidopsis lyrata miR4222 12 80
cin-miR-4024-3p MIMAT0016540 Ciona intestinalis miR-4024-3p 12 80
sja-miR-71b-5p MIMAT0016260 Schistosoma japonicum miR-71b-5p 12 80
nvi-miR-71 MIMAT0015662 Nasonia vitripennis miR-71 12 80
api-miR-71 MIMAT0014735 Acyrthosiphon pisum miR-71 12 80
hma-miR-3009 MIMAT0014677 Hydra magnipapillata miR-3009 12 80
tgu-miR-30a-3p MIMAT0014535 Taeniopygia guttata miR-30a-3p 12 80
tgu-miR-30b-3p MIMAT0014629 Taeniopygia guttata miR-30b-3p 12 80
bma-miR-71 MIMAT0014106 Brugia malayi miR-71 12 80
ssc-miR-30e-3p MIMAT0013873 Sus scrofa miR-30e-3p 12 80
bmo-miR-2854 MIMAT0013789 Bombyx mori miR-2854 12 80
bmo-miR-2759 MIMAT0013631 Bombyx mori miR-2759 12 80
isc-miR-71 MIMAT0012703 Ixodes scapularis miR-71 12 80
dpu-miR-71 MIMAT0012667 Daphnia pulex miR-71 12 80
cte-miR-2690 MIMAT0013543 Capitella teleta miR-2690 12 80
bta-miR-2284p MIMAT0011885 Bos taurus miR-2284p 12 80
ppc-miR-71a MIMAT0011659 Pristionchus pacificus miR-71a 12 80
crm-miR-2229 MIMAT0011627 Caenorhabditis remanei miR-2229 12 80
crm-miR-71-5p MIMAT0011618 Caenorhabditis remanei miR-71-5p 12 80
sme-miR-2160-1-3p MIMAT0011416 Schmidtea mediterranea miR-2160-1-3p 12 80
ssc-miR-30a-3p MIMAT0015300 Sus scrofa miR-30a-3p 12 80
sma-miR-71a-5p MIMAT0010181 Schistosoma mansoni miR-71a-5p 12 80
sja-miR-71a MIMAT0010176 Schistosoma japonicum miR-71a 12 80
spu-miR-71 MIMAT0009660 Strongylocentrotus purpuratus miR-71 12 80
sko-miR-71 MIMAT0009617 Saccoglossus kowalevskii miR-71 12 80
lgi-miR-71 MIMAT0009571 Lottia gigantea miR-71 12 80
cte-miR-71 MIMAT0009517 Capitella teleta miR-71 12 80
bfl-miR-71-5p MIMAT0009476 Branchiostoma floridae miR-71-5p 12 80
dya-miR-288 MIMAT0009094 Drosophila yakuba miR-288 12 80
dwi-miR-288 MIMAT0009050 Drosophila willistoni miR-288 12 80
dvi-miR-288 MIMAT0008952 Drosophila virilis miR-288 12 80
dsi-miR-288 MIMAT0008897 Drosophila simulans miR-288 12 80
dse-miR-288 MIMAT0008806 Drosophila sechellia miR-288 12 80
dpe-miR-288 MIMAT0008753 Drosophila persimilis miR-288 12 80
dmo-miR-288 MIMAT0008675 Drosophila mojavensis miR-288 12 80
dgr-miR-288 MIMAT0008600 Drosophila grimshawi miR-288 12 80
der-miR-288 MIMAT0008551 Dro
