BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bhv1-miR-b8-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
nta-miR6152b MIMAT0024752 Nicotiana tabacum miR6152b 14 20
nta-miR6152a MIMAT0024751 Nicotiana tabacum miR6152a 14 20
mtr-miR5205a MIMAT0021133 Medicago truncatula miR5205a 14 20
dme-miR-4909-3p MIMAT0020515 Drosophila melanogaster miR-4909-3p 14 20
hsa-miR-4666a-3p MIMAT0019742 Homo sapiens miR-4666a-3p 14 20
bhv1-miR-B8-3p MIMAT0013971 Bovine herpesvirus miR-B8-3p 14 20
dsi-miR-2489 MIMAT0012510 Drosophila simulans miR-2489 14 20
dme-miR-2489-3p MIMAT0012196 Drosophila melanogaster miR-2489-3p 14 20
bta-miR-2480 MIMAT0012072 Bos taurus miR-2480 14 20
oha-let-7f-2-3p MIMAT0036638 Ophiophagus hannah let-7f-2-3p 12 80
oha-let-7d-3p MIMAT0036637 Ophiophagus hannah let-7d-3p 12 80
oha-let-7b-3p MIMAT0036635 Ophiophagus hannah let-7b-3p 12 80
tch-miR-381-3p MIMAT0036568 Tupaia chinensis miR-381-3p 12 80
tch-let-7a-3p MIMAT0036484 Tupaia chinensis let-7a-3p 12 80
chi-miR-98-3p MIMAT0036311 Capra hircus miR-98-3p 12 80
chi-miR-381 MIMAT0036199 Capra hircus miR-381 12 80
chi-let-7f-3p MIMAT0035891 Capra hircus let-7f-3p 12 80
chi-let-7b-3p MIMAT0035883 Capra hircus let-7b-3p 12 80
chi-let-7a-3p MIMAT0035881 Capra hircus let-7a-3p 12 80
nve-miR-9420 MIMAT0035376 Nematostella vectensis miR-9420 12 80
efu-miR-381 MIMAT0035093 Eptesicus fuscus miR-381 12 80
eca-miR-9023 MIMAT0034565 Equus caballus miR-9023 12 80
str-miR-8381-3p MIMAT0033419 Strongyloides ratti miR-8381-3p 12 80
ppc-miR-8353-5p MIMAT0033266 Pristionchus pacificus miR-8353-5p 12 80
ppc-miR-8345-3p MIMAT0033237 Pristionchus pacificus miR-8345-3p 12 80
ssa-let-7e-3p MIMAT0032706 Salmo salar let-7e-3p 12 80
ssa-let-7a-3-3p MIMAT0032690 Salmo salar let-7a-3-3p 12 80
ssa-let-7h-3p MIMAT0032273 Salmo salar let-7h-3p 12 80
ssa-let-7f-3p MIMAT0032269 Salmo salar let-7f-3p 12 80
ppe-miR7122b-5p MIMAT0031529 Prunus persica miR7122b-5p 12 80
ppe-miR7122a-5p MIMAT0031527 Prunus persica miR7122a-5p 12 80
prd-miR-7965-3p MIMAT0030831 Panagrellus redivivus miR-7965-3p 12 80
prd-miR-239-5p MIMAT0030462 Panagrellus redivivus miR-239-5p 12 80
cbn-miR-7628 MIMAT0029670 Caenorhabditis brenneri miR-7628 12 80
aja-miR-3596 MIMAT0031134 Artibeus jamaicensis miR-3596 12 80
mdo-miR-7371g-5p MIMAT0028786 Monodelphis domestica miR-7371g-5p 12 80
mdo-miR-7360-3p MIMAT0028733 Monodelphis domestica miR-7360-3p 12 80
mmu-miR-6951-5p MIMAT0027802 Mus musculus miR-6951-5p 12 80
pol-let-7a-3p MIMAT0025417 Paralichthys olivaceus let-7a-3p 12 80
pol-let-7b-3p MIMAT0025415 Paralichthys olivaceus let-7b-3p 12 80
hme-miR-305 MIMAT0024974 Heliconius melpomene miR-305 12 80
hvu-miR5049d MIMAT0024813 Hordeum vulgare miR5049d 12 80
pgi-miR6136b MIMAT0027255 Panax ginseng miR6136b 12 80
ggo-miR-381 MIMAT0024220 Gorilla gorilla miR-381 12 80
cgr-miR-381 MIMAT0023946 Cricetulus griseus miR-381 12 80
hco-miR-5897c MIMAT0023380 Haemonchus contortus miR-5897c 12 80
hco-miR-5897b MIMAT0023364 Haemonchus contortus miR-5897b 12 80
hco-miR-5897a MIMAT0023341 Haemonchus contortus miR-5897a 12 80
ola-let-7a-3p MIMAT0022550 Oryzias latipes let-7a-3p 12 80
aca-miR-98-3p MIMAT0021995 Anolis carolinensis miR-98-3p 12 80
aca-let-7f-2-3p MIMAT0021705 Anolis carolinensis let-7f-2-3p 12 80
aca-let-7f-1-3p MIMAT0021704 Anolis carolinensis let-7f-1-3p 12 80
aca-let-7d-3p MIMAT0021700 Anolis carolinensis let-7d-3p 12 80
aca-let-7b-3p MIMAT0021695 Anolis carolinensis let-7b-3p 12 80
rmi-miR-5330 MIMAT0021403 Rhipicephalus microplus miR-5330 12 80
rmi-miR-5318 MIMAT0021390 Rhipicephalus microplus miR-5318 12 80
mtr-miR5261 MIMAT0021261 Medicago truncatula miR5261 12 80
mtr-miR5260 MIMAT0021260 Medicago truncatula miR5260 12 80
dme-miR-4910-5p MIMAT0020503 Drosophila melanogaster miR-4910-5p 12 80
cel-miR-4809-3p MIMAT0019994 Caenorhabditis elegans miR-4809-3p 12 80
oar-miR-381-3p MIMAT0019293 Ovis aries miR-381-3p 12 80
nlo-miR-305 MIMAT0018432 Nasonia longicornis miR-305 12 80
ngi-miR-305 MIMAT0018403 Nasonia giraulti miR-305 12 80
gma-miR4411 MIMAT0018331 Glycine max miR4411 12 80
isc-miR-305 MIMAT0018920 Ixodes scapularis miR-305 12 80
tca-miR-3814-5p MIMAT0018652 Tribolium castaneum miR-3814-5p 12 80
hsa-miR-3674 MIMAT0018097 Homo sapiens miR-3674 12 80
rno-miR-3570 MIMAT0017850 Rattus norvegicus miR-3570 12 80
rno-miR-3596d MIMAT0017823 Rattus norvegicus miR-3596d 12 80
sja-miR-3484-3p MIMAT0016289 Schistosoma japonicum miR-3484-3p 12 80
ppy-miR-508-3p MIMAT0015932 Pongo pygmaeus miR-508-3p 12 80
ppy-miR-381 MIMAT0015871 Pongo pygmaeus miR-381 12 80
ppy-miR-300 MIMAT0015815 Pongo pygmaeus miR-300 12 80
nvi-miR-305 MIMAT0015686 Nasonia vitripennis miR-305 12 80
esi-miR3469-5p MIMAT0017763 Ectocarpus siliculosus miR3469-5p 12 80
aly-miR857-3p MIMAT0017644 Arabidopsis lyrata miR857-3p 12 80
bmo-miR-3394 MIMAT0015598 Bombyx mori miR-3394 12 80
bmo-miR-3329 MIMAT0015517 Bombyx mori miR-3329 12 80
tgu-let-7d-3p MIMAT0026992 Taeniopygia guttata let-7d-3p 12 80
tgu-let-7f-3p MIMAT0026988 Taeniopygia guttata let-7f-3p 12 80
tgu-let-7a-1-3p MIMAT0031085 Taeniopygia guttata let-7a-1-3p 12 80
tgu-let-7e-3p MIMAT0026982 Taeniopygia guttata let-7e-3p 12 80
tgu-let-7b-3p MIMAT0026975 Taeniopygia guttata let-7b-3p 12 80
cqu-miR-305-5p MIMAT0014382 Culex quinquefasciatus miR-305-5p 12 80
aae-miR-305-5p MIMAT0014249 Aedes aegypti miR-305-5p 12 80
eca-miR-381 MIMAT0013149 Equus caballus miR-381 12 80
mtr-miR2606b MIMAT0013311 Medicago truncatula miR2606b 12 80
mtr-miR2606a MIMAT0013310 Medicago truncatula miR2606a 12 80
dps-miR-2574a-3p MIMAT0012419 Drosophila pseudoobscura miR-2574a-3p 12 80
dps-miR-2574b MIMAT0012305 Drosophila pseudoobscura miR-2574b 12 80
cfa-miR-381 MIMAT0009891 Canis familiaris miR-381 12 80
bta-miR-381 MIMAT0009307 Bos taurus miR-381 12 80
dya-miR-305 MIMAT0009067 Drosophila yakuba miR-305 12 80
dwi-miR-305 MIMAT0008997 Drosophila willistoni miR-305 12 80
dvi-miR-33-3p MIMAT0032067 Drosophila virilis miR-33-3p 12 80
dvi-miR-305-5p MIMAT0008940 Drosophila virilis miR-305-5p 12 80
dsi-miR-305 MIMAT0008860 Drosophila simulans miR-305 12 80
dse-miR-305 MIMAT0008790 Drosophila sechellia miR-305 12 80
dpe-miR-305 MIMAT0008755 Drosophila persimilis miR-305 12 80
dmo-miR-305 MIMAT0008646 Drosophila mojavensis miR-305 12 80
dgr-miR-305 MIMAT0008558 Drosophila grimshawi miR-305 12 80
der-miR-305 MIMAT0008527 Drosophila erecta miR-305 12 80
dan-miR-305 MIMAT0008464 Drosophila ananassae miR-305 12 80
tca-miR-305-5p MIMAT0008388 Tribolium castaneum miR-305-5p 12 80
ptr-miR-643 MIMAT0008297 Pan troglodytes miR-643 12 80
ptr-miR-381 MIMAT0008133 Pan troglodytes miR-381 12 80
ptr-miR-300 MIMAT0008083 Pan troglodytes miR-300 12 80
mml-miR-643 MIMAT0006484 Macaca mulatta miR-643 12 80
mml-miR-381-3p MIMAT0006310 Macaca mulatta miR-381-3p 12 80
mml-let-7f-3p MIMAT0026793 Macaca mulatta let-7f-3p 12 80
mml-let-7b-3p MIMAT0026790 Macaca mulatta let-7b-3p 12 80
mml-let-7a-3p MIMAT0026789 Macaca mulatta let-7a-3p 12 80
oan-let-7f-1-3p MIMAT0007180 Ornithorhynchus anatinus let-7f-1-3p 12 80
oan-let-7d-3p MIMAT0007235 Ornithorhynchus anatinus let-7d-3p 12 80
oan-let-7e-3p MIMAT0006985 Ornithorhynchus anatinus let-7e-3p 12 80
ptr-miR-508 MIMAT0005772 Pan troglodytes miR-508 12 80
ssy-miR-508 MIMAT0005754 Symphalangus syndactylus miR-508 12 80
dme-miR-972-3p MIMAT0005488 Drosophila melanogaster miR-972-3p 12 80
dme-miR-1002-3p MIMAT0020864 Drosophila melanogaster miR-1002-3p 12 80
hsa-miR-300 MIMAT0004903 Homo sapiens miR-300 12 80
bta-let-7a-3p MIMAT0004330 Bos taurus let-7a-3p 12 80
ath-miR857 MIMAT0004301 Arabidopsis thaliana miR857 12 80
mdo-let-7f-1-3p MIMAT0026702 Monodelphis domestica let-7f-1-3p 12 80
mdv1-miR-M2-5p MIMAT0003921 Mareks disease miR-M2-5p 12 80
bmo-miR-305-5p MIMAT0004207 Bombyx mori miR-305-5p 12 80
mmu-miR-374b-3p MIMAT0003728 Mus musculus miR-374b-3p 12 80
hsa-miR-643 MIMAT0003313 Homo sapiens miR-643 12 80
rno-miR-381-3p MIMAT0003199 Rattus norvegicus miR-381-3p 12 80
hsa-miR-508-3p MIMAT0002880 Homo sapiens miR-508-3p 12 80
aga-miR-305 MIMAT0001518 Anopheles gambiae miR-305 12 80
ame-miR-305 MIMAT0001486 Apis mellifera miR-305 12 80
dps-miR-305 MIMAT0001255 Drosophila pseudoobscura miR-305 12 80
gga-let-7k-3p MIMAT0026543 Gallus gallus let-7k-3p 12 80
gga-let-7f-3p MIMAT0026528 Gallus gallus let-7f-3p 12 80
gga-let-7a-3p MIMAT0026491 Gallus gallus let-7a-3p 12 80
rno-miR-98-3p MIMAT0017111 Rattus norvegicus miR-98-3p 12 80
rno-let-7f-1-3p MIMAT0017089 Rattus norvegicus let-7f-1-3p 12 80
rno-let-7c-2-3p MIMAT0017088 Rattus norvegicus let-7c-2-3p 12 80
rno-let-7b-3p MIMAT0004705 Rattus norvegicus let-7b-3p 12 80
rno-let-7a-1-3p MIMAT0017085 Rattus norvegicus let-7a-1-3p 12 80
cbr-lsy-6 MIMAT0000767 Caenorhabditis briggsae lsy-6 12 80
cel-lsy-6-3p MIMAT0000749 Caenorhabditis elegans lsy-6-3p 12 80
mmu-miR-381-3p MIMAT0000746 Mus musculus miR-381-3p 12 80
hsa-miR-381-3p MIMAT0000736 Homo sapiens miR-381-3p 12 80
mmu-miR-98-3p MIMAT0017023 Mus musculus miR-98-3p 12 80
mmu-let-7f-1-3p MIMAT0004623 Mus musculus let-7f-1-3p 12 80
mmu-let-7c-2-3p MIMAT0005439 Mus musculus let-7c-2-3p 12 80
mmu-let-7b-3p MIMAT0004621 Mus musculus let-7b-3p 12 80
mmu-let-7a-1-3p MIMAT0004620 Mus musculus let-7a-1-3p 12 80
dme-let-7-3p MIMAT0020830 Drosophila melanogaster let-7-3p 12 80
dme-miR-305-5p MIMAT0000391 Drosophila melanogaster miR-305-5p 12 80
dme-miR-33-3p MIMAT0020808 Drosophila melanogaster miR-33-3p 12 80
hsa-miR-98-3p MIMAT0022842 Homo sapiens miR-98-3p 12 80
hsa-let-7f-1-3p MIMAT0004486 Homo sapiens let-7f-1-3p 12 80
hsa-let-7b-3p MIMAT0004482 Homo sapiens let-7b-3p 12 80
hsa-let-7a-3p MIMAT0004481 Homo sapiens let-7a-3p 12 80
>nta-miR6152b MIMAT0024752 Nicotiana tabacum miR6152b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 2 attgtat 8
>nta-miR6152a MIMAT0024751 Nicotiana tabacum miR6152a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 2 attgtat 8
>mtr-miR5205a MIMAT0021133 Medicago truncatula miR5205a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 attgtat 7
|||||||
Sbjct: 8 attgtat 2
>dme-miR-4909-3p MIMAT0020515 Drosophila melanogaster
miR-4909-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 1 attgtat 7
>hsa-miR-4666a-3p MIMAT0019742 Homo sapiens miR-4666a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 attgtat 7
|||||||
Sbjct: 8 attgtat 2
>bhv1-miR-B8-3p MIMAT0013971 Bovine herpesvirus miR-B8-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 2 attgtat 8
>dsi-miR-2489 MIMAT0012510 Drosophila simulans miR-2489
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 2 attgtat 8
>dme-miR-2489-3p MIMAT0012196 Drosophila melanogaster
miR-2489-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 2 attgtat 8
>bta-miR-2480 MIMAT0012072 Bos taurus miR-2480
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 attgtat 7
|||||||
Sbjct: 1 attgtat 7
>oha-let-7f-2-3p MIMAT0036638 Ophiophagus hannah let-7f-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>oha-let-7d-3p MIMAT0036637 Ophiophagus hannah let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>oha-let-7b-3p MIMAT0036635 Ophiophagus hannah let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>tch-miR-381-3p MIMAT0036568 Tupaia chinensis miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>tch-let-7a-3p MIMAT0036484 Tupaia chinensis let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>chi-miR-98-3p MIMAT0036311 Capra hircus miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>chi-miR-381 MIMAT0036199 Capra hircus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>chi-let-7f-3p MIMAT0035891 Capra hircus let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>chi-let-7b-3p MIMAT0035883 Capra hircus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>chi-let-7a-3p MIMAT0035881 Capra hircus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>nve-miR-9420 MIMAT0035376 Nematostella vectensis miR-9420
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 6 ttgtat 1
>efu-miR-381 MIMAT0035093 Eptesicus fuscus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>eca-miR-9023 MIMAT0034565 Equus caballus miR-9023
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 1 ttgtat 6
>str-miR-8381-3p MIMAT0033419 Strongyloides ratti miR-8381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>ppc-miR-8353-5p MIMAT0033266 Pristionchus pacificus miR-8353-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 6 ttgtat 1
>ppc-miR-8345-3p MIMAT0033237 Pristionchus pacificus miR-8345-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>ssa-let-7e-3p MIMAT0032706 Salmo salar let-7e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ssa-let-7a-3-3p MIMAT0032690 Salmo salar let-7a-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ssa-let-7h-3p MIMAT0032273 Salmo salar let-7h-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ssa-let-7f-3p MIMAT0032269 Salmo salar let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ppe-miR7122b-5p MIMAT0031529 Prunus persica miR7122b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ppe-miR7122a-5p MIMAT0031527 Prunus persica miR7122a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>prd-miR-7965-3p MIMAT0030831 Panagrellus redivivus miR-7965-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>prd-miR-239-5p MIMAT0030462 Panagrellus redivivus miR-239-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>cbn-miR-7628 MIMAT0029670 Caenorhabditis brenneri miR-7628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 8 attgta 3
>aja-miR-3596 MIMAT0031134 Artibeus jamaicensis miR-3596
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mdo-miR-7371g-5p MIMAT0028786 Monodelphis domestica
miR-7371g-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>mdo-miR-7360-3p MIMAT0028733 Monodelphis domestica miR-7360-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>mmu-miR-6951-5p MIMAT0027802 Mus musculus miR-6951-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 1 ttgtat 6
>pol-let-7a-3p MIMAT0025417 Paralichthys olivaceus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>pol-let-7b-3p MIMAT0025415 Paralichthys olivaceus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>hme-miR-305 MIMAT0024974 Heliconius melpomene miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>hvu-miR5049d MIMAT0024813 Hordeum vulgare miR5049d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 6 attgta 1
>pgi-miR6136b MIMAT0027255 Panax ginseng miR6136b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ggo-miR-381 MIMAT0024220 Gorilla gorilla miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>cgr-miR-381 MIMAT0023946 Cricetulus griseus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>hco-miR-5897c MIMAT0023380 Haemonchus contortus miR-5897c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>hco-miR-5897b MIMAT0023364 Haemonchus contortus miR-5897b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>hco-miR-5897a MIMAT0023341 Haemonchus contortus miR-5897a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>ola-let-7a-3p MIMAT0022550 Oryzias latipes let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>aca-miR-98-3p MIMAT0021995 Anolis carolinensis miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>aca-let-7f-2-3p MIMAT0021705 Anolis carolinensis let-7f-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>aca-let-7f-1-3p MIMAT0021704 Anolis carolinensis let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>aca-let-7d-3p MIMAT0021700 Anolis carolinensis let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>aca-let-7b-3p MIMAT0021695 Anolis carolinensis let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>rmi-miR-5330 MIMAT0021403 Rhipicephalus microplus miR-5330
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>rmi-miR-5318 MIMAT0021390 Rhipicephalus microplus miR-5318
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 1 ttgtat 6
>mtr-miR5261 MIMAT0021261 Medicago truncatula miR5261
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>mtr-miR5260 MIMAT0021260 Medicago truncatula miR5260
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 2 ttgtat 7
>dme-miR-4910-5p MIMAT0020503 Drosophila melanogaster
miR-4910-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>cel-miR-4809-3p MIMAT0019994 Caenorhabditis elegans miR-4809-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>oar-miR-381-3p MIMAT0019293 Ovis aries miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>nlo-miR-305 MIMAT0018432 Nasonia longicornis miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>ngi-miR-305 MIMAT0018403 Nasonia giraulti miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>gma-miR4411 MIMAT0018331 Glycine max miR4411
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>isc-miR-305 MIMAT0018920 Ixodes scapularis miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>tca-miR-3814-5p MIMAT0018652 Tribolium castaneum miR-3814-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 6 attgta 1
>hsa-miR-3674 MIMAT0018097 Homo sapiens miR-3674
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>rno-miR-3570 MIMAT0017850 Rattus norvegicus miR-3570
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 8 attgta 3
>rno-miR-3596d MIMAT0017823 Rattus norvegicus miR-3596d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>sja-miR-3484-3p MIMAT0016289 Schistosoma japonicum miR-3484-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 6 ttgtat 1
>ppy-miR-508-3p MIMAT0015932 Pongo pygmaeus miR-508-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>ppy-miR-381 MIMAT0015871 Pongo pygmaeus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>ppy-miR-300 MIMAT0015815 Pongo pygmaeus miR-300
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>nvi-miR-305 MIMAT0015686 Nasonia vitripennis miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>esi-miR3469-5p MIMAT0017763 Ectocarpus siliculosus miR3469-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 6 attgta 1
>aly-miR857-3p MIMAT0017644 Arabidopsis lyrata miR857-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>bmo-miR-3394 MIMAT0015598 Bombyx mori miR-3394
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 6 attgta 1
>bmo-miR-3329 MIMAT0015517 Bombyx mori miR-3329
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7d-3p MIMAT0026992 Taeniopygia guttata let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7f-3p MIMAT0026988 Taeniopygia guttata let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7a-1-3p MIMAT0031085 Taeniopygia guttata let-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7e-3p MIMAT0026982 Taeniopygia guttata let-7e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7b-3p MIMAT0026975 Taeniopygia guttata let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>cqu-miR-305-5p MIMAT0014382 Culex quinquefasciatus miR-305-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>aae-miR-305-5p MIMAT0014249 Aedes aegypti miR-305-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>eca-miR-381 MIMAT0013149 Equus caballus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>mtr-miR2606b MIMAT0013311 Medicago truncatula miR2606b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 6 attgta 1
>mtr-miR2606a MIMAT0013310 Medicago truncatula miR2606a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 6 attgta 1
>dps-miR-2574a-3p MIMAT0012419 Drosophila pseudoobscura
miR-2574a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>dps-miR-2574b MIMAT0012305 Drosophila pseudoobscura miR-2574b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>cfa-miR-381 MIMAT0009891 Canis familiaris miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>bta-miR-381 MIMAT0009307 Bos taurus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>dya-miR-305 MIMAT0009067 Drosophila yakuba miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dwi-miR-305 MIMAT0008997 Drosophila willistoni miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dvi-miR-33-3p MIMAT0032067 Drosophila virilis miR-33-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>dvi-miR-305-5p MIMAT0008940 Drosophila virilis miR-305-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dsi-miR-305 MIMAT0008860 Drosophila simulans miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dse-miR-305 MIMAT0008790 Drosophila sechellia miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dpe-miR-305 MIMAT0008755 Drosophila persimilis miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dmo-miR-305 MIMAT0008646 Drosophila mojavensis miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dgr-miR-305 MIMAT0008558 Drosophila grimshawi miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>der-miR-305 MIMAT0008527 Drosophila erecta miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dan-miR-305 MIMAT0008464 Drosophila ananassae miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>tca-miR-305-5p MIMAT0008388 Tribolium castaneum miR-305-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>ptr-miR-643 MIMAT0008297 Pan troglodytes miR-643
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>ptr-miR-381 MIMAT0008133 Pan troglodytes miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>ptr-miR-300 MIMAT0008083 Pan troglodytes miR-300
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>mml-miR-643 MIMAT0006484 Macaca mulatta miR-643
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>mml-miR-381-3p MIMAT0006310 Macaca mulatta miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>mml-let-7f-3p MIMAT0026793 Macaca mulatta let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mml-let-7b-3p MIMAT0026790 Macaca mulatta let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mml-let-7a-3p MIMAT0026789 Macaca mulatta let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>oan-let-7f-1-3p MIMAT0007180 Ornithorhynchus anatinus
let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>oan-let-7d-3p MIMAT0007235 Ornithorhynchus anatinus let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>oan-let-7e-3p MIMAT0006985 Ornithorhynchus anatinus let-7e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ptr-miR-508 MIMAT0005772 Pan troglodytes miR-508
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>ssy-miR-508 MIMAT0005754 Symphalangus syndactylus miR-508
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>dme-miR-972-3p MIMAT0005488 Drosophila melanogaster miR-972-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 attgta 6
||||||
Sbjct: 8 attgta 3
>dme-miR-1002-3p MIMAT0020864 Drosophila melanogaster
miR-1002-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>hsa-miR-300 MIMAT0004903 Homo sapiens miR-300
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>bta-let-7a-3p MIMAT0004330 Bos taurus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>ath-miR857 MIMAT0004301 Arabidopsis thaliana miR857
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>mdo-let-7f-1-3p MIMAT0026702 Monodelphis domestica let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mdv1-miR-M2-5p MIMAT0003921 Mareks disease miR-M2-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 2 ttgtat 7
>bmo-miR-305-5p MIMAT0004207 Bombyx mori miR-305-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>mmu-miR-374b-3p MIMAT0003728 Mus musculus miR-374b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>hsa-miR-643 MIMAT0003313 Homo sapiens miR-643
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>rno-miR-381-3p MIMAT0003199 Rattus norvegicus miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>hsa-miR-508-3p MIMAT0002880 Homo sapiens miR-508-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 3 attgta 8
>aga-miR-305 MIMAT0001518 Anopheles gambiae miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>ame-miR-305 MIMAT0001486 Apis mellifera miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dps-miR-305 MIMAT0001255 Drosophila pseudoobscura miR-305
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>gga-let-7k-3p MIMAT0026543 Gallus gallus let-7k-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>gga-let-7f-3p MIMAT0026528 Gallus gallus let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>gga-let-7a-3p MIMAT0026491 Gallus gallus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>rno-miR-98-3p MIMAT0017111 Rattus norvegicus miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>rno-let-7f-1-3p MIMAT0017089 Rattus norvegicus let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>rno-let-7c-2-3p MIMAT0017088 Rattus norvegicus let-7c-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>rno-let-7b-3p MIMAT0004705 Rattus norvegicus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>rno-let-7a-1-3p MIMAT0017085 Rattus norvegicus let-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>cbr-lsy-6 MIMAT0000767 Caenorhabditis briggsae lsy-6
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>cel-lsy-6-3p MIMAT0000749 Caenorhabditis elegans lsy-6-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgtat 7
||||||
Sbjct: 3 ttgtat 8
>mmu-miR-381-3p MIMAT0000746 Mus musculus miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>hsa-miR-381-3p MIMAT0000736 Homo sapiens miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 7 ttgtat 2
>mmu-miR-98-3p MIMAT0017023 Mus musculus miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7f-1-3p MIMAT0004623 Mus musculus let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7c-2-3p MIMAT0005439 Mus musculus let-7c-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7b-3p MIMAT0004621 Mus musculus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7a-1-3p MIMAT0004620 Mus musculus let-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>dme-let-7-3p MIMAT0020830 Drosophila melanogaster let-7-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>dme-miR-305-5p MIMAT0000391 Drosophila melanogaster miR-305-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 attgta 6
||||||
Sbjct: 1 attgta 6
>dme-miR-33-3p MIMAT0020808 Drosophila melanogaster miR-33-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>hsa-miR-98-3p MIMAT0022842 Homo sapiens miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>hsa-let-7f-1-3p MIMAT0004486 Homo sapiens let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>hsa-let-7b-3p MIMAT0004482 Homo sapiens let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
>hsa-let-7a-3p MIMAT0004481 Homo sapiens let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgtat 7
||||||
Sbjct: 8 ttgtat 3
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 189
Number of extensions: 180
Number of successful extensions: 156
Number of sequences better than 100.0: 156
Number of HSP's gapped: 156
Number of HSP's successfully gapped: 156
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
