BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= dev-miR-d11-3p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dev-miR-D11-3p MIMAT0028183 Duck enteritis miR-D11-3p                  14      20
ppe-miR6283 MIMAT0027313 Prunus persica miR6283                        14      20
dme-miR-968-3p MIMAT0020865 Drosophila melanogaster miR-968-3p         14      20
sme-let-7c-3p MIMAT0012088 Schmidtea mediterranea let-7c-3p            14      20
oha-miR-208-5p MIMAT0036820 Ophiophagus hannah miR-208-5p              12      80
gsa-miR-2001-3p MIMAT0035281 Gyrodactylus salaris miR-2001-3p          12      80
atr-miR8577 MIMAT0033860 Amborella trichopoda miR8577                  12      80
sma-miR-8442-5p MIMAT0033590 Schistosoma mansoni miR-8442-5p           12      80
str-miR-2-5p MIMAT0033474 Strongyloides ratti miR-2-5p                 12      80
ssa-miR-130d-2-5p MIMAT0032329 Salmo salar miR-130d-2-5p               12      80
bbe-miR-129a-5p MIMAT0031582 Branchiostoma belcheri miR-129a-5p        12      80
mmu-miR-3473g MIMAT0031427 Mus musculus miR-3473g                      12      80
prd-miR-7959a-5p MIMAT0030808 Panagrellus redivivus miR-7959a-5p       12      80
prd-miR-7959b-5p MIMAT0030804 Panagrellus redivivus miR-7959b-5p       12      80
bta-miR-2285w MIMAT0029945 Bos taurus miR-2285w                        12      80
ipu-miR-130c MIMAT0029404 Ictalurus punctatus miR-130c                 12      80
mdo-miR-1544d-3p MIMAT0028755 Monodelphis domestica miR-1544d-3p       12      80
mdo-miR-1544b-3p MIMAT0028745 Monodelphis domestica miR-1544b-3p       12      80
mdo-miR-7341-5p MIMAT0028692 Monodelphis domestica miR-7341-5p         12      80
mdo-miR-130c-2-5p MIMAT0031110 Monodelphis domestica miR-130c-2-5p     12      80
mdo-miR-130c-1-5p MIMAT0028514 Monodelphis domestica miR-130c-1-5p     12      80
mdo-miR-7258-5p MIMAT0028482 Monodelphis domestica miR-7258-5p         12      80
mmu-miR-6946-5p MIMAT0027792 Mus musculus miR-6946-5p                  12      80
hsa-miR-6832-3p MIMAT0027565 Homo sapiens miR-6832-3p                  12      80
hsa-miR-548az-5p MIMAT0025456 Homo sapiens miR-548az-5p                12      80
mse-miR-6093 MIMAT0024501 Manduca sexta miR-6093                       12      80
ggo-miR-4484 MIMAT0024307 Gorilla gorilla miR-4484                     12      80
ggo-miR-548f MIMAT0024294 Gorilla gorilla miR-548f                     12      80
mtr-miR5237 MIMAT0021227 Medicago truncatula miR5237                   12      80
osa-miR5080 MIMAT0020579 Oryza sativa miR5080                          12      80
pma-miR-130a-5p MIMAT0019454 Petromyzon marinus miR-130a-5p            12      80
pma-miR-9b MIMAT0019375 Petromyzon marinus miR-9b                      12      80
hsa-miR-548an MIMAT0019079 Homo sapiens miR-548an                      12      80
hsa-miR-4484 MIMAT0019018 Homo sapiens miR-4484                        12      80
hsa-miR-548aj-5p MIMAT0022739 Homo sapiens miR-548aj-5p                12      80
ame-miR-3740 MIMAT0018609 Apis mellifera miR-3740                      12      80
cin-miR-4054-3p MIMAT0016598 Ciona intestinalis miR-4054-3p            12      80
ppy-miR-553 MIMAT0015999 Pongo pygmaeus miR-553                        12      80
bmo-miR-3223-5p MIMAT0015403 Bombyx mori miR-3223-5p                   12      80
hsa-miR-548x-5p MIMAT0022733 Homo sapiens miR-548x-5p                  12      80
hsa-miR-548t-5p MIMAT0015009 Homo sapiens miR-548t-5p                  12      80
hsa-miR-3140-3p MIMAT0015008 Homo sapiens miR-3140-3p                  12      80
tgu-miR-130c-5p MIMAT0027012 Taeniopygia guttata miR-130c-5p           12      80
tgu-miR-130a-5p MIMAT0027006 Taeniopygia guttata miR-130a-5p           12      80
tgu-miR-2963-3p MIMAT0014463 Taeniopygia guttata miR-2963-3p           12      80
dps-miR-968-3p MIMAT0012246 Drosophila pseudoobscura miR-968-3p        12      80
bta-miR-2284h-5p MIMAT0012019 Bos taurus miR-2284h-5p                  12      80
sme-miR-2159-5p MIMAT0011252 Schmidtea mediterranea miR-2159-5p        12      80
bfl-miR-129a-5p MIMAT0010008 Branchiostoma floridae miR-129a-5p        12      80
ptr-miR-548n MIMAT0008227 Pan troglodytes miR-548n                     12      80
mml-miR-570 MIMAT0006433 Macaca mulatta miR-570                        12      80
gga-miR-130c-5p MIMAT0007733 Gallus gallus miR-130c-5p                 12      80
mdo-miR-1544a-3p MIMAT0026768 Monodelphis domestica miR-1544a-3p       12      80
gma-miR1516a-3p MIMAT0007375 Glycine max miR1516a-3p                   12      80
oan-miR-130b-5p MIMAT0007158 Ornithorhynchus anatinus miR-130b-5p      12      80
oan-miR-130c-5p MIMAT0006907 Ornithorhynchus anatinus miR-130c-5p      12      80
hsa-miR-548n MIMAT0005916 Homo sapiens miR-548n                        12      80
hsa-miR-548g-5p MIMAT0022722 Homo sapiens miR-548g-5p                  12      80
hsa-miR-548f-5p MIMAT0026739 Homo sapiens miR-548f-5p                  12      80
hsa-miR-548e-5p MIMAT0026736 Homo sapiens miR-548e-5p                  12      80
ppt-miR1079-3p MIMAT0005212 Physcomitrella patens miR1079-3p           12      80
ppt-miR1052 MIMAT0005169 Physcomitrella patens miR1052                 12      80
ath-miR855 MIMAT0004279 Arabidopsis thaliana miR855                    12      80
ptc-miR474c MIMAT0002066 Populus trichocarpa miR474c                   12      80
ptc-miR474b MIMAT0002065 Populus trichocarpa miR474b                   12      80
ptc-miR474a MIMAT0002064 Populus trichocarpa miR474a                   12      80
dre-miR-130c-5p MIMAT0031969 Danio rerio miR-130c-5p                   12      80
gga-miR-130a-5p MIMAT0026532 Gallus gallus miR-130a-5p                 12      80
>dev-miR-D11-3p MIMAT0028183 Duck enteritis miR-D11-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 caaaagg 7
         |||||||
Sbjct: 2 caaaagg 8
>ppe-miR6283 MIMAT0027313 Prunus persica miR6283
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 caaaagg 7
         |||||||
Sbjct: 1 caaaagg 7
>dme-miR-968-3p MIMAT0020865 Drosophila melanogaster miR-968-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 caaaagg 7
         |||||||
Sbjct: 8 caaaagg 2
>sme-let-7c-3p MIMAT0012088 Schmidtea mediterranea let-7c-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 caaaagg 7
         |||||||
Sbjct: 8 caaaagg 2
>oha-miR-208-5p MIMAT0036820 Ophiophagus hannah miR-208-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 8 caaaag 3
>gsa-miR-2001-3p MIMAT0035281 Gyrodactylus salaris miR-2001-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 6 aaaagg 1
>atr-miR8577 MIMAT0033860 Amborella trichopoda miR8577
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>sma-miR-8442-5p MIMAT0033590 Schistosoma mansoni miR-8442-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>str-miR-2-5p MIMAT0033474 Strongyloides ratti miR-2-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>ssa-miR-130d-2-5p MIMAT0032329 Salmo salar miR-130d-2-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>bbe-miR-129a-5p MIMAT0031582 Branchiostoma belcheri miR-129a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 6 aaaagg 1
>mmu-miR-3473g MIMAT0031427 Mus musculus miR-3473g
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>prd-miR-7959a-5p MIMAT0030808 Panagrellus redivivus
         miR-7959a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>prd-miR-7959b-5p MIMAT0030804 Panagrellus redivivus
         miR-7959b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>bta-miR-2285w MIMAT0029945 Bos taurus miR-2285w
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>ipu-miR-130c MIMAT0029404 Ictalurus punctatus miR-130c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>mdo-miR-1544d-3p MIMAT0028755 Monodelphis domestica
         miR-1544d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 6 aaaagg 1
>mdo-miR-1544b-3p MIMAT0028745 Monodelphis domestica
         miR-1544b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 6 aaaagg 1
>mdo-miR-7341-5p MIMAT0028692 Monodelphis domestica miR-7341-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>mdo-miR-130c-2-5p MIMAT0031110 Monodelphis domestica
         miR-130c-2-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>mdo-miR-130c-1-5p MIMAT0028514 Monodelphis domestica
         miR-130c-1-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>mdo-miR-7258-5p MIMAT0028482 Monodelphis domestica miR-7258-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>mmu-miR-6946-5p MIMAT0027792 Mus musculus miR-6946-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>hsa-miR-6832-3p MIMAT0027565 Homo sapiens miR-6832-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>hsa-miR-548az-5p MIMAT0025456 Homo sapiens miR-548az-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>mse-miR-6093 MIMAT0024501 Manduca sexta miR-6093
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 7 aaaagg 2
>ggo-miR-4484 MIMAT0024307 Gorilla gorilla miR-4484
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 3 aaaagg 8
>ggo-miR-548f MIMAT0024294 Gorilla gorilla miR-548f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>mtr-miR5237 MIMAT0021227 Medicago truncatula miR5237
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>osa-miR5080 MIMAT0020579 Oryza sativa miR5080
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>pma-miR-130a-5p MIMAT0019454 Petromyzon marinus miR-130a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>pma-miR-9b MIMAT0019375 Petromyzon marinus miR-9b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 6 caaaag 1
>hsa-miR-548an MIMAT0019079 Homo sapiens miR-548an
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>hsa-miR-4484 MIMAT0019018 Homo sapiens miR-4484
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>hsa-miR-548aj-5p MIMAT0022739 Homo sapiens miR-548aj-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>ame-miR-3740 MIMAT0018609 Apis mellifera miR-3740
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 3 aaaagg 8
>cin-miR-4054-3p MIMAT0016598 Ciona intestinalis miR-4054-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 8 caaaag 3
>ppy-miR-553 MIMAT0015999 Pongo pygmaeus miR-553
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>bmo-miR-3223-5p MIMAT0015403 Bombyx mori miR-3223-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>hsa-miR-548x-5p MIMAT0022733 Homo sapiens miR-548x-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>hsa-miR-548t-5p MIMAT0015009 Homo sapiens miR-548t-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>hsa-miR-3140-3p MIMAT0015008 Homo sapiens miR-3140-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 8 caaaag 3
>tgu-miR-130c-5p MIMAT0027012 Taeniopygia guttata miR-130c-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>tgu-miR-130a-5p MIMAT0027006 Taeniopygia guttata miR-130a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>tgu-miR-2963-3p MIMAT0014463 Taeniopygia guttata miR-2963-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 1 aaaagg 6
>dps-miR-968-3p MIMAT0012246 Drosophila pseudoobscura miR-968-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>bta-miR-2284h-5p MIMAT0012019 Bos taurus miR-2284h-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>sme-miR-2159-5p MIMAT0011252 Schmidtea mediterranea miR-2159-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>bfl-miR-129a-5p MIMAT0010008 Branchiostoma floridae miR-129a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 6 aaaagg 1
>ptr-miR-548n MIMAT0008227 Pan troglodytes miR-548n
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>mml-miR-570 MIMAT0006433 Macaca mulatta miR-570
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>gga-miR-130c-5p MIMAT0007733 Gallus gallus miR-130c-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>mdo-miR-1544a-3p MIMAT0026768 Monodelphis domestica
         miR-1544a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 6 aaaagg 1
>gma-miR1516a-3p MIMAT0007375 Glycine max miR1516a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>oan-miR-130b-5p MIMAT0007158 Ornithorhynchus anatinus
         miR-130b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>oan-miR-130c-5p MIMAT0006907 Ornithorhynchus anatinus
         miR-130c-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>hsa-miR-548n MIMAT0005916 Homo sapiens miR-548n
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>hsa-miR-548g-5p MIMAT0022722 Homo sapiens miR-548g-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>hsa-miR-548f-5p MIMAT0026739 Homo sapiens miR-548f-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>hsa-miR-548e-5p MIMAT0026736 Homo sapiens miR-548e-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>ppt-miR1079-3p MIMAT0005212 Physcomitrella patens miR1079-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>ppt-miR1052 MIMAT0005169 Physcomitrella patens miR1052
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>ath-miR855 MIMAT0004279 Arabidopsis thaliana miR855
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 3 caaaag 8
>ptc-miR474c MIMAT0002066 Populus trichocarpa miR474c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>ptc-miR474b MIMAT0002065 Populus trichocarpa miR474b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>ptc-miR474a MIMAT0002064 Populus trichocarpa miR474a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 caaaag 6
         ||||||
Sbjct: 1 caaaag 6
>dre-miR-130c-5p MIMAT0031969 Danio rerio miR-130c-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
>gga-miR-130a-5p MIMAT0026532 Gallus gallus miR-130a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 aaaagg 7
         ||||||
Sbjct: 8 aaaagg 3
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 86
Number of extensions: 82
Number of successful extensions: 68
Number of sequences better than 100.0: 68
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 68
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)