BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tumv-miR-s26
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gga-miR-1563 MIMAT0007422 Gallus gallus miR-1563                       14      20
ata-miR164b-3p MIMAT0037219 Aegilops tauschii miR164b-3p               12      80
rno-miR-1297 MIMAT0035723 Rattus norvegicus miR-1297                   12      80
dvi-miR-9550-5p MIMAT0035640 Drosophila virilis miR-9550-5p            12      80
gra-miR8709b MIMAT0034169 Gossypium raimondii miR8709b                 12      80
gra-miR164a MIMAT0034113 Gossypium raimondii miR164a                   12      80
gra-miR8710b MIMAT0034098 Gossypium raimondii miR8710b                 12      80
gra-miR8710a MIMAT0034097 Gossypium raimondii miR8710a                 12      80
gra-miR8709c MIMAT0034096 Gossypium raimondii miR8709c                 12      80
sly-miR164a-3p MIMAT0033974 Solanum lycopersicum miR164a-3p            12      80
atr-miR8565g MIMAT0033841 Amborella trichopoda miR8565g                12      80
sma-miR-8428-3p MIMAT0033561 Schistosoma mansoni miR-8428-3p           12      80
ppc-miR-8356a-3p MIMAT0033275 Pristionchus pacificus miR-8356a-3p      12      80
stu-miR167d-3p MIMAT0031310 Solanum tuberosum miR167d-3p               12      80
stu-miR167a-3p MIMAT0031308 Solanum tuberosum miR167a-3p               12      80
stu-miR167b-3p MIMAT0031306 Solanum tuberosum miR167b-3p               12      80
stu-miR164-3p MIMAT0030973 Solanum tuberosum miR164-3p                 12      80
prd-miR-7924-5p MIMAT0030692 Panagrellus redivivus miR-7924-5p         12      80
bdi-miR7784b-5p MIMAT0030324 Brachypodium distachyon miR7784b-5p       12      80
bdi-miR7784a-5p MIMAT0030322 Brachypodium distachyon miR7784a-5p       12      80
bdi-miR7769-3p MIMAT0030289 Brachypodium distachyon miR7769-3p         12      80
bdi-miR7741-3p.2 MIMAT0030222 Brachypodium distachyon miR7741-3p.2     12      80
mdo-miR-7257-5p MIMAT0028480 Monodelphis domestica miR-7257-5p         12      80
mmu-miR-6516-3p MIMAT0027344 Mus musculus miR-6516-3p                  12      80
mmu-miR-6408 MIMAT0025161 Mus musculus miR-6408                        12      80
cgr-miR-322-3p MIMAT0023908 Cricetulus griseus miR-322-3p              12      80
cin-miR-5597-5p MIMAT0022317 Ciona intestinalis miR-5597-5p            12      80
hsa-miR-5589-3p MIMAT0022298 Homo sapiens miR-5589-3p                  12      80
rgl-miR5578 MIMAT0023003 Rehmannia glutinosa miR5578                   12      80
sbi-miR5565b MIMAT0022253 Sorghum bicolor miR5565b                     12      80
sbi-miR5565a MIMAT0022252 Sorghum bicolor miR5565a                     12      80
sbi-miR5565c MIMAT0022247 Sorghum bicolor miR5565c                     12      80
mtr-miR167b-3p MIMAT0022234 Medicago truncatula miR167b-3p             12      80
cel-miR-5549-3p MIMAT0022190 Caenorhabditis elegans miR-5549-3p        12      80
bdi-miR164c-3p MIMAT0027084 Brachypodium distachyon miR164c-3p         12      80
bdi-miR164a-3p MIMAT0027067 Brachypodium distachyon miR164a-3p         12      80
hsa-miR-4643 MIMAT0019703 Homo sapiens miR-4643                        12      80
pma-miR-4555 MIMAT0019587 Petromyzon marinus miR-4555                  12      80
vvi-miR3635-5p MIMAT0018043 Vitis vinifera miR3635-5p                  12      80
cin-miR-4110-3p MIMAT0016699 Ciona intestinalis miR-4110-3p            12      80
aly-miR167a-3p MIMAT0017474 Arabidopsis lyrata miR167a-3p              12      80
aly-miR164b-3p MIMAT0017452 Arabidopsis lyrata miR164b-3p              12      80
bmo-miR-3375-5p MIMAT0015565 Bombyx mori miR-3375-5p                   12      80
bmo-miR-3350 MIMAT0015535 Bombyx mori miR-3350                         12      80
mmu-miR-3082-3p MIMAT0014873 Mus musculus miR-3082-3p                  12      80
zma-miR167j-3p MIMAT0015322 Zea mays miR167j-3p                        12      80
zma-miR164h-3p MIMAT0015320 Zea mays miR164h-3p                        12      80
zma-miR164e-3p MIMAT0015317 Zea mays miR164e-3p                        12      80
hvt-miR-H16-5p MIMAT0012870 Herpesvirus of miR-H16-5p                  12      80
bta-miR-1434-5p MIMAT0012039 Bos taurus miR-1434-5p                    12      80
aqu-miR-2015-5p MIMAT0009688 Amphimedon queenslandica miR-2015-5p      12      80
dya-miR-288 MIMAT0009094 Drosophila yakuba miR-288                     12      80
dwi-miR-288 MIMAT0009050 Drosophila willistoni miR-288                 12      80
dvi-miR-288 MIMAT0008952 Drosophila virilis miR-288                    12      80
dsi-miR-288 MIMAT0008897 Drosophila simulans miR-288                   12      80
dse-miR-288 MIMAT0008806 Drosophila sechellia miR-288                  12      80
dpe-miR-288 MIMAT0008753 Drosophila persimilis miR-288                 12      80
dmo-miR-288 MIMAT0008675 Drosophila mojavensis miR-288                 12      80
dgr-miR-288 MIMAT0008600 Drosophila grimshawi miR-288                  12      80
der-miR-288 MIMAT0008551 Drosophila erecta miR-288                     12      80
dan-miR-288 MIMAT0008406 Drosophila ananassae miR-288                  12      80
gga-miR-1681 MIMAT0007568 Gallus gallus miR-1681                       12      80
gga-miR-1667-3p MIMAT0007550 Gallus gallus miR-1667-3p                 12      80
dme-miR-954-3p MIMAT0020846 Drosophila melanogaster miR-954-3p         12      80
hsa-miR-942-3p MIMAT0026734 Homo sapiens miR-942-3p                    12      80
ath-miR868-5p MIMAT0020355 Arabidopsis thaliana miR868-5p              12      80
zma-miR167i-3p MIMAT0015190 Zea mays miR167i-3p                        12      80
zma-miR167h-3p MIMAT0015189 Zea mays miR167h-3p                        12      80
zma-miR164c-3p MIMAT0015139 Zea mays miR164c-3p                        12      80
dps-miR-288 MIMAT0001252 Drosophila pseudoobscura miR-288              12      80
mmu-miR-322-3p MIMAT0000549 Mus musculus miR-322-3p                    12      80
rno-miR-322-3p MIMAT0000547 Rattus norvegicus miR-322-3p               12      80
dme-miR-288-3p MIMAT0000363 Drosophila melanogaster miR-288-3p         12      80
ath-miR167a-3p MIMAT0031883 Arabidopsis thaliana miR167a-3p            12      80
ath-miR164b-3p MIMAT0031878 Arabidopsis thaliana miR164b-3p            12      80
hsa-miR-96-3p MIMAT0004510 Homo sapiens miR-96-3p                      12      80
>gga-miR-1563 MIMAT0007422 Gallus gallus miR-1563
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 cacatga 7
         |||||||
Sbjct: 2 cacatga 8
>ata-miR164b-3p MIMAT0037219 Aegilops tauschii miR164b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>rno-miR-1297 MIMAT0035723 Rattus norvegicus miR-1297
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dvi-miR-9550-5p MIMAT0035640 Drosophila virilis miR-9550-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 7 acatga 2
>gra-miR8709b MIMAT0034169 Gossypium raimondii miR8709b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 6 acatga 1
>gra-miR164a MIMAT0034113 Gossypium raimondii miR164a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>gra-miR8710b MIMAT0034098 Gossypium raimondii miR8710b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>gra-miR8710a MIMAT0034097 Gossypium raimondii miR8710a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>gra-miR8709c MIMAT0034096 Gossypium raimondii miR8709c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>sly-miR164a-3p MIMAT0033974 Solanum lycopersicum miR164a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>atr-miR8565g MIMAT0033841 Amborella trichopoda miR8565g
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>sma-miR-8428-3p MIMAT0033561 Schistosoma mansoni miR-8428-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>ppc-miR-8356a-3p MIMAT0033275 Pristionchus pacificus
         miR-8356a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>stu-miR167d-3p MIMAT0031310 Solanum tuberosum miR167d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>stu-miR167a-3p MIMAT0031308 Solanum tuberosum miR167a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>stu-miR167b-3p MIMAT0031306 Solanum tuberosum miR167b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>stu-miR164-3p MIMAT0030973 Solanum tuberosum miR164-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>prd-miR-7924-5p MIMAT0030692 Panagrellus redivivus miR-7924-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>bdi-miR7784b-5p MIMAT0030324 Brachypodium distachyon
         miR7784b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>bdi-miR7784a-5p MIMAT0030322 Brachypodium distachyon
         miR7784a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>bdi-miR7769-3p MIMAT0030289 Brachypodium distachyon miR7769-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>bdi-miR7741-3p.2 MIMAT0030222 Brachypodium distachyon
         miR7741-3p.2
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 8 cacatg 3
>mdo-miR-7257-5p MIMAT0028480 Monodelphis domestica miR-7257-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 1 acatga 6
>mmu-miR-6516-3p MIMAT0027344 Mus musculus miR-6516-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 6 acatga 1
>mmu-miR-6408 MIMAT0025161 Mus musculus miR-6408
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 1 cacatg 6
>cgr-miR-322-3p MIMAT0023908 Cricetulus griseus miR-322-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>cin-miR-5597-5p MIMAT0022317 Ciona intestinalis miR-5597-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>hsa-miR-5589-3p MIMAT0022298 Homo sapiens miR-5589-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>rgl-miR5578 MIMAT0023003 Rehmannia glutinosa miR5578
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>sbi-miR5565b MIMAT0022253 Sorghum bicolor miR5565b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>sbi-miR5565a MIMAT0022252 Sorghum bicolor miR5565a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>sbi-miR5565c MIMAT0022247 Sorghum bicolor miR5565c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>mtr-miR167b-3p MIMAT0022234 Medicago truncatula miR167b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>cel-miR-5549-3p MIMAT0022190 Caenorhabditis elegans miR-5549-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 6 acatga 1
>bdi-miR164c-3p MIMAT0027084 Brachypodium distachyon miR164c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>bdi-miR164a-3p MIMAT0027067 Brachypodium distachyon miR164a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>hsa-miR-4643 MIMAT0019703 Homo sapiens miR-4643
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>pma-miR-4555 MIMAT0019587 Petromyzon marinus miR-4555
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>vvi-miR3635-5p MIMAT0018043 Vitis vinifera miR3635-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 8 cacatg 3
>cin-miR-4110-3p MIMAT0016699 Ciona intestinalis miR-4110-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 1 cacatg 6
>aly-miR167a-3p MIMAT0017474 Arabidopsis lyrata miR167a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>aly-miR164b-3p MIMAT0017452 Arabidopsis lyrata miR164b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>bmo-miR-3375-5p MIMAT0015565 Bombyx mori miR-3375-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 8 cacatg 3
>bmo-miR-3350 MIMAT0015535 Bombyx mori miR-3350
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 6 acatga 1
>mmu-miR-3082-3p MIMAT0014873 Mus musculus miR-3082-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 1 cacatg 6
>zma-miR167j-3p MIMAT0015322 Zea mays miR167j-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>zma-miR164h-3p MIMAT0015320 Zea mays miR164h-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>zma-miR164e-3p MIMAT0015317 Zea mays miR164e-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>hvt-miR-H16-5p MIMAT0012870 Herpesvirus of miR-H16-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 7 acatga 2
>bta-miR-1434-5p MIMAT0012039 Bos taurus miR-1434-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>aqu-miR-2015-5p MIMAT0009688 Amphimedon queenslandica
         miR-2015-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 6 acatga 1
>dya-miR-288 MIMAT0009094 Drosophila yakuba miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dwi-miR-288 MIMAT0009050 Drosophila willistoni miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dvi-miR-288 MIMAT0008952 Drosophila virilis miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dsi-miR-288 MIMAT0008897 Drosophila simulans miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dse-miR-288 MIMAT0008806 Drosophila sechellia miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dpe-miR-288 MIMAT0008753 Drosophila persimilis miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dmo-miR-288 MIMAT0008675 Drosophila mojavensis miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dgr-miR-288 MIMAT0008600 Drosophila grimshawi miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>der-miR-288 MIMAT0008551 Drosophila erecta miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>dan-miR-288 MIMAT0008406 Drosophila ananassae miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>gga-miR-1681 MIMAT0007568 Gallus gallus miR-1681
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>gga-miR-1667-3p MIMAT0007550 Gallus gallus miR-1667-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>dme-miR-954-3p MIMAT0020846 Drosophila melanogaster miR-954-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 3 cacatg 8
>hsa-miR-942-3p MIMAT0026734 Homo sapiens miR-942-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 1 cacatg 6
>ath-miR868-5p MIMAT0020355 Arabidopsis thaliana miR868-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 6 acatga 1
>zma-miR167i-3p MIMAT0015190 Zea mays miR167i-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>zma-miR167h-3p MIMAT0015189 Zea mays miR167h-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>zma-miR164c-3p MIMAT0015139 Zea mays miR164c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>dps-miR-288 MIMAT0001252 Drosophila pseudoobscura miR-288
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>mmu-miR-322-3p MIMAT0000549 Mus musculus miR-322-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>rno-miR-322-3p MIMAT0000547 Rattus norvegicus miR-322-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acatga 7
         ||||||
Sbjct: 3 acatga 8
>dme-miR-288-3p MIMAT0000363 Drosophila melanogaster miR-288-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>ath-miR167a-3p MIMAT0031883 Arabidopsis thaliana miR167a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
>ath-miR164b-3p MIMAT0031878 Arabidopsis thaliana miR164b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 cacatg 6
         ||||||
Sbjct: 6 cacatg 1
>hsa-miR-96-3p MIMAT0004510 Homo sapiens miR-96-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acatga 7
         ||||||
Sbjct: 8 acatga 3
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 88
Number of extensions: 87
Number of successful extensions: 76
Number of sequences better than 100.0: 76
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 76
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)