BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mdv1-miR-m13
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

efu-miR-9243a MIMAT0034858 Eptesicus fuscus miR-9243a                  14      20
gra-miR8768 MIMAT0034204 Gossypium raimondii miR8768                   14      20
esi-miR8623b MIMAT0033972 Ectocarpus siliculosus miR8623b              14      20
ppc-miR-8288-5p MIMAT0033085 Pristionchus pacificus miR-8288-5p        14      20
mdo-miR-7343-5p MIMAT0028696 Monodelphis domestica miR-7343-5p         14      20
sly-miR6023 MIMAT0023592 Solanum lycopersicum miR6023                  14      20
stu-miR6023 MIMAT0023591 Solanum tuberosum miR6023                     14      20
gma-miR5678 MIMAT0022466 Glycine max miR5678                           14      20
gma-miR5671a MIMAT0022453 Glycine max miR5671a                         14      20
hsa-miR-5581-3p MIMAT0022276 Homo sapiens miR-5581-3p                  14      20
mtr-miR5219 MIMAT0021177 Medicago truncatula miR5219                   14      20
cin-miR-4192-3p MIMAT0016810 Ciona intestinalis miR-4192-3p            14      20
bmo-miR-3378-5p MIMAT0015569 Bombyx mori miR-3378-5p                   14      20
aqu-miR-2021-5p MIMAT0009753 Amphimedon queenslandica miR-2021-5p      14      20
gga-miR-1626-5p MIMAT0007495 Gallus gallus miR-1626-5p                 14      20
mdv1-miR-M13 MIMAT0005985 Mareks disease miR-M13                       14      20
cel-miR-51-3p MIMAT0015099 Caenorhabditis elegans miR-51-3p            14      20
gma-miR9767 MIMAT0036404 Glycine max miR9767                           12      80
bra-miR6032-5p MIMAT0035862 Brassica rapa miR6032-5p                   12      80
eca-miR-9155 MIMAT0034731 Equus caballus miR-9155                      12      80
cfa-miR-8824 MIMAT0034314 Canis familiaris miR-8824                    12      80
gra-miR8778 MIMAT0034260 Gossypium raimondii miR8778                   12      80
atr-miR2950 MIMAT0033951 Amborella trichopoda miR2950                  12      80
sma-miR-8454-5p MIMAT0033620 Schistosoma mansoni miR-8454-5p           12      80
ppc-miR-8360-3p MIMAT0033283 Pristionchus pacificus miR-8360-3p        12      80
ssa-miR-146d-3p MIMAT0032377 Salmo salar miR-146d-3p                   12      80
lja-miR1507b MIMAT0029331 Lotus japonicus miR1507b                     12      80
lja-miR1507a MIMAT0029330 Lotus japonicus miR1507a                     12      80
mes-miR2950 MIMAT0029309 Manihot esculenta miR2950                     12      80
gga-miR-7468-3p MIMAT0029091 Gallus gallus miR-7468-3p                 12      80
mdo-miR-1540b-5p MIMAT0028938 Monodelphis domestica miR-1540b-5p       12      80
mdo-miR-7386m-5p MIMAT0028862 Monodelphis domestica miR-7386m-5p       12      80
mdo-miR-7246-3p MIMAT0028459 Monodelphis domestica miR-7246-3p         12      80
mmu-miR-7232-5p MIMAT0028432 Mus musculus miR-7232-5p                  12      80
dre-miR-7148-5p MIMAT0028206 Danio rerio miR-7148-5p                   12      80
ddi-miR-7095-5p MIMAT0028097 Dictyostelium discoideum miR-7095-5p      12      80
mmu-miR-7093-3p MIMAT0028093 Mus musculus miR-7093-3p                  12      80
mmu-miR-7077-3p MIMAT0028061 Mus musculus miR-7077-3p                  12      80
mmu-miR-7048-3p MIMAT0028001 Mus musculus miR-7048-3p                  12      80
gga-miR-6658-3p MIMAT0025759 Gallus gallus miR-6658-3p                 12      80
ptc-miR6425d-3p MIMAT0025215 Populus trichocarpa miR6425d-3p           12      80
ptc-miR6425c-3p MIMAT0025208 Populus trichocarpa miR6425c-3p           12      80
ptc-miR6425b-3p MIMAT0025199 Populus trichocarpa miR6425b-3p           12      80
ptc-miR6425a-3p MIMAT0025191 Populus trichocarpa miR6425a-3p           12      80
osa-miR5532 MIMAT0022167 Oryza sativa miR5532                          12      80
mtr-miR5208c MIMAT0021141 Medicago truncatula miR5208c                 12      80
mtr-miR5208b MIMAT0021140 Medicago truncatula miR5208b                 12      80
mtr-miR5208a MIMAT0021139 Medicago truncatula miR5208a                 12      80
hsa-miR-4802-3p MIMAT0019982 Homo sapiens miR-4802-3p                  12      80
hsa-miR-4716-5p MIMAT0019826 Homo sapiens miR-4716-5p                  12      80
pma-miR-4571-5p MIMAT0019603 Petromyzon marinus miR-4571-5p            12      80
ngi-miR-281 MIMAT0018388 Nasonia giraulti miR-281                      12      80
tca-miR-3861-5p MIMAT0018796 Tribolium castaneum miR-3861-5p           12      80
vvi-miR2950-5p MIMAT0018009 Vitis vinifera miR2950-5p                  12      80
aly-miR4223 MIMAT0017911 Arabidopsis lyrata miR4223                    12      80
ppy-miR-587 MIMAT0016029 Pongo pygmaeus miR-587                        12      80
bmo-miR-3375-5p MIMAT0015565 Bombyx mori miR-3375-5p                   12      80
bmo-miR-3324 MIMAT0015511 Bombyx mori miR-3324                         12      80
tgu-miR-146a-3p MIMAT0014465 Taeniopygia guttata miR-146a-3p           12      80
iltv-miR-I1-3p MIMAT0012724 Infectious laryngotracheitis miR-I1-3p     12      80
ptr-miR-587 MIMAT0008259 Pan troglodytes miR-587                       12      80
gga-miR-146c-3p MIMAT0007736 Gallus gallus miR-146c-3p                 12      80
hsa-miR-587 MIMAT0003253 Homo sapiens miR-587                          12      80
>efu-miR-9243a MIMAT0034858 Eptesicus fuscus miR-9243a
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 8 catggaa 2
>gra-miR8768 MIMAT0034204 Gossypium raimondii miR8768
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 7 catggaa 1
>esi-miR8623b MIMAT0033972 Ectocarpus siliculosus miR8623b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 1 catggaa 7
>ppc-miR-8288-5p MIMAT0033085 Pristionchus pacificus miR-8288-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 2 catggaa 8
>mdo-miR-7343-5p MIMAT0028696 Monodelphis domestica miR-7343-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 2 catggaa 8
>sly-miR6023 MIMAT0023592 Solanum lycopersicum miR6023
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 7 catggaa 1
>stu-miR6023 MIMAT0023591 Solanum tuberosum miR6023
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 7 catggaa 1
>gma-miR5678 MIMAT0022466 Glycine max miR5678
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 7 catggaa 1
>gma-miR5671a MIMAT0022453 Glycine max miR5671a
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 1 catggaa 7
>hsa-miR-5581-3p MIMAT0022276 Homo sapiens miR-5581-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 7 catggaa 1
>mtr-miR5219 MIMAT0021177 Medicago truncatula miR5219
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 2 catggaa 8
>cin-miR-4192-3p MIMAT0016810 Ciona intestinalis miR-4192-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 2 catggaa 8
>bmo-miR-3378-5p MIMAT0015569 Bombyx mori miR-3378-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 7 catggaa 1
>aqu-miR-2021-5p MIMAT0009753 Amphimedon queenslandica
         miR-2021-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 1 catggaa 7
>gga-miR-1626-5p MIMAT0007495 Gallus gallus miR-1626-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 8 catggaa 2
>mdv1-miR-M13 MIMAT0005985 Mareks disease miR-M13
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 2 catggaa 8
>cel-miR-51-3p MIMAT0015099 Caenorhabditis elegans miR-51-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 catggaa 7
         |||||||
Sbjct: 1 catggaa 7
>gma-miR9767 MIMAT0036404 Glycine max miR9767
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>bra-miR6032-5p MIMAT0035862 Brassica rapa miR6032-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>eca-miR-9155 MIMAT0034731 Equus caballus miR-9155
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1
>cfa-miR-8824 MIMAT0034314 Canis familiaris miR-8824
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>gra-miR8778 MIMAT0034260 Gossypium raimondii miR8778
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 7 atggaa 2
>atr-miR2950 MIMAT0033951 Amborella trichopoda miR2950
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 6 atggaa 1
>sma-miR-8454-5p MIMAT0033620 Schistosoma mansoni miR-8454-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>ppc-miR-8360-3p MIMAT0033283 Pristionchus pacificus miR-8360-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 8 catgga 3
>ssa-miR-146d-3p MIMAT0032377 Salmo salar miR-146d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>lja-miR1507b MIMAT0029331 Lotus japonicus miR1507b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>lja-miR1507a MIMAT0029330 Lotus japonicus miR1507a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>mes-miR2950 MIMAT0029309 Manihot esculenta miR2950
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 6 atggaa 1
>gga-miR-7468-3p MIMAT0029091 Gallus gallus miR-7468-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 3 atggaa 8
>mdo-miR-1540b-5p MIMAT0028938 Monodelphis domestica
         miR-1540b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>mdo-miR-7386m-5p MIMAT0028862 Monodelphis domestica
         miR-7386m-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 1 catgga 6
>mdo-miR-7246-3p MIMAT0028459 Monodelphis domestica miR-7246-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>mmu-miR-7232-5p MIMAT0028432 Mus musculus miR-7232-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>dre-miR-7148-5p MIMAT0028206 Danio rerio miR-7148-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>ddi-miR-7095-5p MIMAT0028097 Dictyostelium discoideum
         miR-7095-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 6 atggaa 1
>mmu-miR-7093-3p MIMAT0028093 Mus musculus miR-7093-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 7 atggaa 2
>mmu-miR-7077-3p MIMAT0028061 Mus musculus miR-7077-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>mmu-miR-7048-3p MIMAT0028001 Mus musculus miR-7048-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>gga-miR-6658-3p MIMAT0025759 Gallus gallus miR-6658-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 1 catgga 6
>ptc-miR6425d-3p MIMAT0025215 Populus trichocarpa miR6425d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>ptc-miR6425c-3p MIMAT0025208 Populus trichocarpa miR6425c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>ptc-miR6425b-3p MIMAT0025199 Populus trichocarpa miR6425b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>ptc-miR6425a-3p MIMAT0025191 Populus trichocarpa miR6425a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>osa-miR5532 MIMAT0022167 Oryza sativa miR5532
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>mtr-miR5208c MIMAT0021141 Medicago truncatula miR5208c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>mtr-miR5208b MIMAT0021140 Medicago truncatula miR5208b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>mtr-miR5208a MIMAT0021139 Medicago truncatula miR5208a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>hsa-miR-4802-3p MIMAT0019982 Homo sapiens miR-4802-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>hsa-miR-4716-5p MIMAT0019826 Homo sapiens miR-4716-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1
>pma-miR-4571-5p MIMAT0019603 Petromyzon marinus miR-4571-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>ngi-miR-281 MIMAT0018388 Nasonia giraulti miR-281
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 catgga 6
         ||||||
Sbjct: 3 catgga 8
>tca-miR-3861-5p MIMAT0018796 Tribolium castaneum miR-3861-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>vvi-miR2950-5p MIMAT0018009 Vitis vinifera miR2950-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 6 atggaa 1
>aly-miR4223 MIMAT0017911 Arabidopsis lyrata miR4223
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 1 atggaa 6
>ppy-miR-587 MIMAT0016029 Pongo pygmaeus miR-587
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 7 atggaa 2
>bmo-miR-3375-5p MIMAT0015565 Bombyx mori miR-3375-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1
>bmo-miR-3324 MIMAT0015511 Bombyx mori miR-3324
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 6 catgga 1
>tgu-miR-146a-3p MIMAT0014465 Taeniopygia guttata miR-146a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 8 catgga 3
>iltv-miR-I1-3p MIMAT0012724 Infectious laryngotracheitis
         miR-I1-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 8 atggaa 3
>ptr-miR-587 MIMAT0008259 Pan troglodytes miR-587
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 7 atggaa 2
>gga-miR-146c-3p MIMAT0007736 Gallus gallus miR-146c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 catgga 6
         ||||||
Sbjct: 8 catgga 3
>hsa-miR-587 MIMAT0003253 Homo sapiens miR-587
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 atggaa 7
         ||||||
Sbjct: 7 atggaa 2
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 122
Number of extensions: 105
Number of successful extensions: 67
Number of sequences better than 100.0: 63
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 67
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)