BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prv-miR-11-1
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sme-miR-2147a MIMAT0011230 Schmidtea mediterranea miR-2147a 16 6.9
oha-miR-7-5p MIMAT0036945 Ophiophagus hannah miR-7-5p 14 27
tch-miR-7-5p MIMAT0036465 Tupaia chinensis miR-7-5p 14 27
chi-miR-7-5p MIMAT0036288 Capra hircus miR-7-5p 14 27
gsa-miR-7-5p MIMAT0035282 Gyrodactylus salaris miR-7-5p 14 27
efu-miR-7c MIMAT0035187 Eptesicus fuscus miR-7c 14 27
efu-miR-7b MIMAT0035004 Eptesicus fuscus miR-7b 14 27
sma-miR-7-5p MIMAT0033598 Schistosoma mansoni miR-7-5p 14 27
ssa-miR-7a-5p MIMAT0032693 Salmo salar miR-7a-5p 14 27
cpa-miR8146 MIMAT0031843 Carica papaya miR8146 14 27
bbe-miR-7-5p MIMAT0031714 Branchiostoma belcheri miR-7-5p 14 27
lva-miR-7-5p MIMAT0032191 Lytechinus variegatus miR-7-5p 14 27
pmi-miR-7-5p MIMAT0032141 Patiria miniata miR-7-5p 14 27
ipu-miR-7b MIMAT0029527 Ictalurus punctatus miR-7b 14 27
ipu-miR-7a MIMAT0029526 Ictalurus punctatus miR-7a 14 27
ccr-miR-7b MIMAT0026320 Cyprinus carpio miR-7b 14 27
ccr-miR-7a MIMAT0026319 Cyprinus carpio miR-7a 14 27
hme-miR-7 MIMAT0024984 Heliconius melpomene miR-7 14 27
mse-miR-7 MIMAT0024426 Manduca sexta miR-7 14 27
cgr-miR-7b MIMAT0024004 Cricetulus griseus miR-7b 14 27
hco-miR-7 MIMAT0023387 Haemonchus contortus miR-7 14 27
ola-miR-7 MIMAT0022641 Oryzias latipes miR-7 14 27
tur-miR-7-5p MIMAT0023036 Tetranychus urticae miR-7-5p 14 27
aca-miR-7-5p MIMAT0021983 Anolis carolinensis miR-7-5p 14 27
asu-miR-7-5p MIMAT0021429 Ascaris suum miR-7-5p 14 27
mtr-miR5224b MIMAT0021185 Medicago truncatula miR5224b 14 27
emu-miR-7 MIMAT0020259 Echinococcus multilocularis miR-7 14 27
egr-miR-7 MIMAT0020233 Echinococcus granulosus miR-7 14 27
pma-miR-7b MIMAT0019372 Petromyzon marinus miR-7b 14 27
pma-miR-7a-5p MIMAT0019370 Petromyzon marinus miR-7a-5p 14 27
cgr-miR-7a MIMAT0020368 Cricetulus griseus miR-7a 14 27
nlo-miR-7 MIMAT0018436 Nasonia longicornis miR-7 14 27
gma-miR4361 MIMAT0018256 Glycine max miR4361 14 27
sja-miR-7-5p MIMAT0016249 Schistosoma japonicum miR-7-5p 14 27
nvi-miR-7 MIMAT0015659 Nasonia vitripennis miR-7 14 27
api-miR-7 MIMAT0014734 Acyrthosiphon pisum miR-7 14 27
tgu-miR-7-5p MIMAT0014510 Taeniopygia guttata miR-7-5p 14 27
cqu-miR-7 MIMAT0014423 Culex quinquefasciatus miR-7 14 27
aae-miR-7 MIMAT0014290 Aedes aegypti miR-7 14 27
bma-miR-7 MIMAT0014099 Brugia malayi miR-7 14 27
eca-miR-7 MIMAT0012905 Equus caballus miR-7 14 27
isc-miR-7 MIMAT0012702 Ixodes scapularis miR-7 14 27
dpu-miR-7 MIMAT0012666 Daphnia pulex miR-7 14 27
sme-miR-7d-5p MIMAT0011253 Schmidtea mediterranea miR-7d-5p 14 27
spu-miR-7 MIMAT0009651 Strongylocentrotus purpuratus miR-7 14 27
sko-miR-7-5p MIMAT0009608 Saccoglossus kowalevskii miR-7-5p 14 27
lgi-miR-7 MIMAT0009560 Lottia gigantea miR-7 14 27
cte-miR-7 MIMAT0009506 Capitella teleta miR-7 14 27
bfl-miR-7 MIMAT0009464 Branchiostoma floridae miR-7 14 27
dya-miR-7 MIMAT0009119 Drosophila yakuba miR-7 14 27
dwi-miR-7 MIMAT0009009 Drosophila willistoni miR-7 14 27
dvi-miR-7-5p MIMAT0008931 Drosophila virilis miR-7-5p 14 27
dsi-miR-7 MIMAT0008901 Drosophila simulans miR-7 14 27
dse-miR-7 MIMAT0008771 Drosophila sechellia miR-7 14 27
dpe-miR-7 MIMAT0008742 Drosophila persimilis miR-7 14 27
dmo-miR-7 MIMAT0008692 Drosophila mojavensis miR-7 14 27
dgr-miR-7 MIMAT0008622 Drosophila grimshawi miR-7 14 27
der-miR-7 MIMAT0008537 Drosophila erecta miR-7 14 27
dan-miR-7 MIMAT0008410 Drosophila ananassae miR-7 14 27
tca-miR-7-5p MIMAT0008355 Tribolium castaneum miR-7-5p 14 27
cfa-miR-7 MIMAT0006634 Canis familiaris miR-7 14 27
mml-miR-7 MIMAT0006159 Macaca mulatta miR-7 14 27
gma-miR1526 MIMAT0007388 Glycine max miR1526 14 27
csa-miR-7 MIMAT0006120 Ciona savignyi miR-7 14 27
cin-miR-7-5p MIMAT0006091 Ciona intestinalis miR-7-5p 14 27
odi-miR-7 MIMAT0006078 Oikopleura dioica miR-7 14 27
oan-miR-7-5p MIMAT0006986 Ornithorhynchus anatinus miR-7-5p 14 27
mdo-miR-7 MIMAT0004086 Monodelphis domestica miR-7 14 27
sme-miR-7c-5p MIMAT0003971 Schmidtea mediterranea miR-7c-5p 14 27
sme-miR-7b-5p MIMAT0003970 Schmidtea mediterranea miR-7b-5p 14 27
sme-miR-7a-5p MIMAT0003969 Schmidtea mediterranea miR-7a-5p 14 27
bta-miR-7 MIMAT0003843 Bos taurus miR-7 14 27
bmo-miR-7-5p MIMAT0004192 Bombyx mori miR-7-5p 14 27
xtr-miR-7 MIMAT0003552 Xenopus tropicalis miR-7 14 27
tni-miR-7 MIMAT0003010 Tetraodon nigroviridis miR-7 14 27
fru-miR-7 MIMAT0003009 Fugu rubripes miR-7 14 27
ptr-miR-7 MIMAT0002485 Pan troglodytes miR-7 14 27
ppa-miR-7 MIMAT0002484 Pan paniscus miR-7 14 27
mne-miR-7 MIMAT0002483 Macaca nemestrina miR-7 14 27
lla-miR-7 MIMAT0002482 Lagothrix lagotricha miR-7 14 27
sla-miR-7 MIMAT0002481 Saguinus labiatus miR-7 14 27
ppy-miR-7 MIMAT0002480 Pongo pygmaeus miR-7 14 27
ggo-miR-7 MIMAT0002479 Gorilla gorilla miR-7 14 27
ssc-miR-7 MIMAT0002141 Sus scrofa miR-7 14 27
aga-miR-7 MIMAT0001523 Anopheles gambiae miR-7 14 27
ame-miR-7 MIMAT0001489 Apis mellifera miR-7 14 27
dre-miR-7a MIMAT0001266 Danio rerio miR-7a 14 27
dre-miR-7b MIMAT0001265 Danio rerio miR-7b 14 27
dps-miR-7 MIMAT0001209 Drosophila pseudoobscura miR-7 14 27
gga-miR-7b MIMAT0001192 Gallus gallus miR-7b 14 27
gga-miR-7 MIMAT0001157 Gallus gallus miR-7 14 27
rno-miR-7b MIMAT0000780 Rattus norvegicus miR-7b 14 27
mmu-miR-7b-5p MIMAT0000678 Mus musculus miR-7b-5p 14 27
mmu-miR-7a-5p MIMAT0000677 Mus musculus miR-7a-5p 14 27
rno-miR-7a-5p MIMAT0000606 Rattus norvegicus miR-7a-5p 14 27
hsa-miR-7-5p MIMAT0000252 Homo sapiens miR-7-5p 14 27
dme-miR-7-5p MIMAT0000112 Drosophila melanogaster miR-7-5p 14 27
>sme-miR-2147a MIMAT0011230 Schmidtea mediterranea miR-2147a
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 cggaagac 8
||||||||
Sbjct: 1 cggaagac 8
>oha-miR-7-5p MIMAT0036945 Ophiophagus hannah miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>tch-miR-7-5p MIMAT0036465 Tupaia chinensis miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>chi-miR-7-5p MIMAT0036288 Capra hircus miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>gsa-miR-7-5p MIMAT0035282 Gyrodactylus salaris miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>efu-miR-7c MIMAT0035187 Eptesicus fuscus miR-7c
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>efu-miR-7b MIMAT0035004 Eptesicus fuscus miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sma-miR-7-5p MIMAT0033598 Schistosoma mansoni miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ssa-miR-7a-5p MIMAT0032693 Salmo salar miR-7a-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cpa-miR8146 MIMAT0031843 Carica papaya miR8146
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>bbe-miR-7-5p MIMAT0031714 Branchiostoma belcheri miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>lva-miR-7-5p MIMAT0032191 Lytechinus variegatus miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>pmi-miR-7-5p MIMAT0032141 Patiria miniata miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ipu-miR-7b MIMAT0029527 Ictalurus punctatus miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ipu-miR-7a MIMAT0029526 Ictalurus punctatus miR-7a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ccr-miR-7b MIMAT0026320 Cyprinus carpio miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ccr-miR-7a MIMAT0026319 Cyprinus carpio miR-7a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>hme-miR-7 MIMAT0024984 Heliconius melpomene miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mse-miR-7 MIMAT0024426 Manduca sexta miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cgr-miR-7b MIMAT0024004 Cricetulus griseus miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>hco-miR-7 MIMAT0023387 Haemonchus contortus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ola-miR-7 MIMAT0022641 Oryzias latipes miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>tur-miR-7-5p MIMAT0023036 Tetranychus urticae miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>aca-miR-7-5p MIMAT0021983 Anolis carolinensis miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>asu-miR-7-5p MIMAT0021429 Ascaris suum miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mtr-miR5224b MIMAT0021185 Medicago truncatula miR5224b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 cggaaga 7
|||||||
Sbjct: 1 cggaaga 7
>emu-miR-7 MIMAT0020259 Echinococcus multilocularis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>egr-miR-7 MIMAT0020233 Echinococcus granulosus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>pma-miR-7b MIMAT0019372 Petromyzon marinus miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>pma-miR-7a-5p MIMAT0019370 Petromyzon marinus miR-7a-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cgr-miR-7a MIMAT0020368 Cricetulus griseus miR-7a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>nlo-miR-7 MIMAT0018436 Nasonia longicornis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>gma-miR4361 MIMAT0018256 Glycine max miR4361
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 cggaaga 7
|||||||
Sbjct: 2 cggaaga 8
>sja-miR-7-5p MIMAT0016249 Schistosoma japonicum miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>nvi-miR-7 MIMAT0015659 Nasonia vitripennis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>api-miR-7 MIMAT0014734 Acyrthosiphon pisum miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>tgu-miR-7-5p MIMAT0014510 Taeniopygia guttata miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cqu-miR-7 MIMAT0014423 Culex quinquefasciatus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>aae-miR-7 MIMAT0014290 Aedes aegypti miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>bma-miR-7 MIMAT0014099 Brugia malayi miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>eca-miR-7 MIMAT0012905 Equus caballus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>isc-miR-7 MIMAT0012702 Ixodes scapularis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dpu-miR-7 MIMAT0012666 Daphnia pulex miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sme-miR-7d-5p MIMAT0011253 Schmidtea mediterranea miR-7d-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>spu-miR-7 MIMAT0009651 Strongylocentrotus purpuratus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sko-miR-7-5p MIMAT0009608 Saccoglossus kowalevskii miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>lgi-miR-7 MIMAT0009560 Lottia gigantea miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cte-miR-7 MIMAT0009506 Capitella teleta miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>bfl-miR-7 MIMAT0009464 Branchiostoma floridae miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dya-miR-7 MIMAT0009119 Drosophila yakuba miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dwi-miR-7 MIMAT0009009 Drosophila willistoni miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dvi-miR-7-5p MIMAT0008931 Drosophila virilis miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dsi-miR-7 MIMAT0008901 Drosophila simulans miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dse-miR-7 MIMAT0008771 Drosophila sechellia miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dpe-miR-7 MIMAT0008742 Drosophila persimilis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dmo-miR-7 MIMAT0008692 Drosophila mojavensis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dgr-miR-7 MIMAT0008622 Drosophila grimshawi miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>der-miR-7 MIMAT0008537 Drosophila erecta miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dan-miR-7 MIMAT0008410 Drosophila ananassae miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>tca-miR-7-5p MIMAT0008355 Tribolium castaneum miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cfa-miR-7 MIMAT0006634 Canis familiaris miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mml-miR-7 MIMAT0006159 Macaca mulatta miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>gma-miR1526 MIMAT0007388 Glycine max miR1526
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 cggaaga 7
|||||||
Sbjct: 2 cggaaga 8
>csa-miR-7 MIMAT0006120 Ciona savignyi miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>cin-miR-7-5p MIMAT0006091 Ciona intestinalis miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>odi-miR-7 MIMAT0006078 Oikopleura dioica miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>oan-miR-7-5p MIMAT0006986 Ornithorhynchus anatinus miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mdo-miR-7 MIMAT0004086 Monodelphis domestica miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sme-miR-7c-5p MIMAT0003971 Schmidtea mediterranea miR-7c-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sme-miR-7b-5p MIMAT0003970 Schmidtea mediterranea miR-7b-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sme-miR-7a-5p MIMAT0003969 Schmidtea mediterranea miR-7a-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>bta-miR-7 MIMAT0003843 Bos taurus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>bmo-miR-7-5p MIMAT0004192 Bombyx mori miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>xtr-miR-7 MIMAT0003552 Xenopus tropicalis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>tni-miR-7 MIMAT0003010 Tetraodon nigroviridis miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>fru-miR-7 MIMAT0003009 Fugu rubripes miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ptr-miR-7 MIMAT0002485 Pan troglodytes miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ppa-miR-7 MIMAT0002484 Pan paniscus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mne-miR-7 MIMAT0002483 Macaca nemestrina miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>lla-miR-7 MIMAT0002482 Lagothrix lagotricha miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>sla-miR-7 MIMAT0002481 Saguinus labiatus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ppy-miR-7 MIMAT0002480 Pongo pygmaeus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ggo-miR-7 MIMAT0002479 Gorilla gorilla miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ssc-miR-7 MIMAT0002141 Sus scrofa miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>aga-miR-7 MIMAT0001523 Anopheles gambiae miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>ame-miR-7 MIMAT0001489 Apis mellifera miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dre-miR-7a MIMAT0001266 Danio rerio miR-7a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dre-miR-7b MIMAT0001265 Danio rerio miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dps-miR-7 MIMAT0001209 Drosophila pseudoobscura miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>gga-miR-7b MIMAT0001192 Gallus gallus miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>gga-miR-7 MIMAT0001157 Gallus gallus miR-7
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>rno-miR-7b MIMAT0000780 Rattus norvegicus miR-7b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mmu-miR-7b-5p MIMAT0000678 Mus musculus miR-7b-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>mmu-miR-7a-5p MIMAT0000677 Mus musculus miR-7a-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>rno-miR-7a-5p MIMAT0000606 Rattus norvegicus miR-7a-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>hsa-miR-7-5p MIMAT0000252 Homo sapiens miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
>dme-miR-7-5p MIMAT0000112 Drosophila melanogaster miR-7-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 ggaagac 8
|||||||
Sbjct: 2 ggaagac 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 288
Number of extensions: 190
Number of successful extensions: 167
Number of sequences better than 100.0: 97
Number of HSP's gapped: 167
Number of HSP's successfully gapped: 97
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space: 573248
Effective search space used: 573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)
