BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= hvsa-miR-hsur2-5p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
chi-miR-197-5p MIMAT0036034 Capra hircus miR-197-5p 14 20
cfa-miR-8885 MIMAT0034389 Canis familiaris miR-8885 14 20
bbe-miR-31-3p MIMAT0031667 Branchiostoma belcheri miR-31-3p 14 20
hsa-miR-7157-3p MIMAT0028225 Homo sapiens miR-7157-3p 14 20
mmu-miR-6965-3p MIMAT0027831 Mus musculus miR-6965-3p 14 20
hsa-miR-6737-3p MIMAT0027376 Homo sapiens miR-6737-3p 14 20
gga-miR-6565-3p MIMAT0025636 Gallus gallus miR-6565-3p 14 20
ame-miR-6047b MIMAT0023688 Apis mellifera miR-6047b 14 20
hvsa-miR-HSUR2-5p MIMAT0022686 Herpesvirus saimiri miR-HSUR2-5p 14 20
isc-miR-5308 MIMAT0021378 Ixodes scapularis miR-5308 14 20
mmu-miR-5104 MIMAT0020611 Mus musculus miR-5104 14 20
hsa-miR-5008-3p MIMAT0021040 Homo sapiens miR-5008-3p 14 20
dme-miR-4908-3p MIMAT0020514 Drosophila melanogaster miR-4908-3p 14 20
bta-miR-2455 MIMAT0012037 Bos taurus miR-2455 14 20
bfl-miR-31-3p MIMAT0019141 Branchiostoma floridae miR-31-3p 14 20
gga-miR-1695 MIMAT0007587 Gallus gallus miR-1695 14 20
cel-miR-785-5p MIMAT0032015 Caenorhabditis elegans miR-785-5p 14 20
osa-miR528-3p MIMAT0022926 Oryza sativa miR528-3p 14 20
oha-miR-218-5p MIMAT0036836 Ophiophagus hannah miR-218-5p 12 80
oha-miR-210-3p MIMAT0036827 Ophiophagus hannah miR-210-3p 12 80
tch-miR-218-5p MIMAT0036514 Tupaia chinensis miR-218-5p 12 80
tch-miR-210 MIMAT0036464 Tupaia chinensis miR-210 12 80
mmu-miR-9769-5p MIMAT0036461 Mus musculus miR-9769-5p 12 80
chi-miR-218 MIMAT0036066 Capra hircus miR-218 12 80
tae-miR9657a-3p MIMAT0035765 Triticum aestivum miR9657a-3p 12 80
efu-miR-218b MIMAT0035068 Eptesicus fuscus miR-218b 12 80
efu-miR-218a MIMAT0035036 Eptesicus fuscus miR-218a 12 80
efu-miR-19 MIMAT0034994 Eptesicus fuscus miR-19 12 80
efu-miR-9265 MIMAT0034895 Eptesicus fuscus miR-9265 12 80
efu-miR-9189c MIMAT0034886 Eptesicus fuscus miR-9189c 12 80
eca-miR-9168 MIMAT0034746 Equus caballus miR-9168 12 80
eca-miR-8932 MIMAT0034460 Equus caballus miR-8932 12 80
cfa-miR-8868 MIMAT0034365 Canis familiaris miR-8868 12 80
ssa-miR-8157-5p MIMAT0032736 Salmo salar miR-8157-5p 12 80
ssa-miR-218-5p MIMAT0032524 Salmo salar miR-218-5p 12 80
ssa-miR-210-3p MIMAT0032509 Salmo salar miR-210-3p 12 80
bbe-miR-210-5p MIMAT0031645 Branchiostoma belcheri miR-210-5p 12 80
bbe-let-7a-2-3p MIMAT0031862 Branchiostoma belcheri let-7a-2-3p 12 80
ppe-miR8133-5p MIMAT0031563 Prunus persica miR8133-5p 12 80
hsa-miR-8064 MIMAT0030991 Homo sapiens miR-8064 12 80
stu-miR164-3p MIMAT0030973 Solanum tuberosum miR164-3p 12 80
prd-miR-7969-5p MIMAT0030840 Panagrellus redivivus miR-7969-5p 12 80
oar-miR-218a MIMAT0030045 Ovis aries miR-218a 12 80
ipu-miR-218b MIMAT0029473 Ictalurus punctatus miR-218b 12 80
ipu-miR-218a MIMAT0029472 Ictalurus punctatus miR-218a 12 80
ipu-miR-210 MIMAT0029464 Ictalurus punctatus miR-210 12 80
gga-miR-7470-3p MIMAT0029095 Gallus gallus miR-7470-3p 12 80
oan-miR-7417-3p MIMAT0028983 Ornithorhynchus anatinus miR-7417-3p 12 80
oan-miR-7413-5p MIMAT0028974 Ornithorhynchus anatinus miR-7413-5p 12 80
oan-miR-7401-5p MIMAT0028944 Ornithorhynchus anatinus miR-7401-5p 12 80
ccr-miR-218b MIMAT0026272 Cyprinus carpio miR-218b 12 80
ccr-miR-218a MIMAT0026271 Cyprinus carpio miR-218a 12 80
ccr-miR-210 MIMAT0026268 Cyprinus carpio miR-210 12 80
mmu-miR-7026-3p MIMAT0027957 Mus musculus miR-7026-3p 12 80
mmu-miR-7008-3p MIMAT0027921 Mus musculus miR-7008-3p 12 80
mmu-miR-7005-3p MIMAT0027915 Mus musculus miR-7005-3p 12 80
mmu-miR-7002-3p MIMAT0027907 Mus musculus miR-7002-3p 12 80
gga-miR-3594-5p MIMAT0025641 Gallus gallus miR-3594-5p 12 80
mmu-miR-6539 MIMAT0025584 Mus musculus miR-6539 12 80
bta-miR-6526 MIMAT0025556 Bos taurus miR-6526 12 80
ssc-miR-218 MIMAT0025371 Sus scrofa miR-218 12 80
ggo-miR-210 MIMAT0024146 Gorilla gorilla miR-210 12 80
cgr-miR-218a MIMAT0023855 Cricetulus griseus miR-218a 12 80
cgr-miR-210-3p MIMAT0023849 Cricetulus griseus miR-210-3p 12 80
ola-miR-218b MIMAT0022609 Oryzias latipes miR-218b 12 80
ola-miR-218a MIMAT0022529 Oryzias latipes miR-218a 12 80
bra-miR5723 MIMAT0023022 Brassica rapa miR5723 12 80
cin-miR-5601-5p MIMAT0022325 Ciona intestinalis miR-5601-5p 12 80
aca-miR-218-5p MIMAT0021880 Anolis carolinensis miR-218-5p 12 80
aca-miR-210-3p MIMAT0021868 Anolis carolinensis miR-210-3p 12 80
ssc-miR-2320-5p MIMAT0020597 Sus scrofa miR-2320-5p 12 80
ssc-miR-218b MIMAT0020589 Sus scrofa miR-218b 12 80
pma-miR-4568 MIMAT0019600 Petromyzon marinus miR-4568 12 80
pma-miR-218b MIMAT0019531 Petromyzon marinus miR-218b 12 80
pma-miR-218a-5p MIMAT0019529 Petromyzon marinus miR-218a-5p 12 80
oar-miR-3957-3p MIMAT0019326 Ovis aries miR-3957-3p 12 80
tca-miR-3866-5p MIMAT0018824 Tribolium castaneum miR-3866-5p 12 80
tca-miR-3865-3p MIMAT0018815 Tribolium castaneum miR-3865-3p 12 80
ame-miR-3773 MIMAT0018549 Apis mellifera miR-3773 12 80
ssc-miR-218-5p MIMAT0022961 Sus scrofa miR-218-5p 12 80
cin-miR-4034-5p MIMAT0016557 Ciona intestinalis miR-4034-5p 12 80
cin-miR-4033-5p MIMAT0016555 Ciona intestinalis miR-4033-5p 12 80
cin-miR-4017-5p MIMAT0016524 Ciona intestinalis miR-4017-5p 12 80
rno-miR-3590-3p MIMAT0017890 Rattus norvegicus miR-3590-3p 12 80
ppy-miR-1914 MIMAT0016242 Pongo pygmaeus miR-1914 12 80
ppy-miR-636 MIMAT0016074 Pongo pygmaeus miR-636 12 80
tgu-miR-218-5p MIMAT0014522 Taeniopygia guttata miR-218-5p 12 80
tgu-miR-1451-5p MIMAT0014451 Taeniopygia guttata miR-1451-5p 12 80
cqu-miR-988-5p MIMAT0014362 Culex quinquefasciatus miR-988-5p 12 80
aae-miR-988-5p MIMAT0014280 Aedes aegypti miR-988-5p 12 80
eca-miR-218 MIMAT0012928 Equus caballus miR-218 12 80
cte-miR-210b MIMAT0013572 Capitella teleta miR-210b 12 80
bta-miR-2400 MIMAT0011956 Bos taurus miR-2400 12 80
bta-miR-2320-5p MIMAT0011844 Bos taurus miR-2320-5p 12 80
cel-miR-2207-3p MIMAT0011426 Caenorhabditis elegans miR-2207-3p 12 80
sme-miR-2162-5p MIMAT0011256 Schmidtea mediterranea miR-2162-5p 12 80
mcv-miR-M1-3p MIMAT0010151 Merkel cell miR-M1-3p 12 80
bfl-miR-210-3p MIMAT0009494 Branchiostoma floridae miR-210-3p 12 80
ptr-miR-210 MIMAT0008070 Pan troglodytes miR-210 12 80
hsa-miR-1914-5p MIMAT0007889 Homo sapiens miR-1914-5p 12 80
ssc-miR-210 MIMAT0007761 Sus scrofa miR-210 12 80
cfa-miR-218 MIMAT0006672 Canis familiaris miR-218 12 80
mml-miR-636 MIMAT0006479 Macaca mulatta miR-636 12 80
mml-miR-210-3p MIMAT0006240 Macaca mulatta miR-210-3p 12 80
gga-miR-1451-5p MIMAT0007324 Gallus gallus miR-1451-5p 12 80
oan-miR-218-5p MIMAT0006815 Ornithorhynchus anatinus miR-218-5p 12 80
mdo-miR-218-5p MIMAT0004133 Monodelphis domestica miR-218-5p 12 80
bta-miR-218 MIMAT0003798 Bos taurus miR-218 12 80
xtr-miR-218 MIMAT0003631 Xenopus tropicalis miR-218 12 80
xtr-miR-210 MIMAT0003624 Xenopus tropicalis miR-210 12 80
hsa-miR-636 MIMAT0003306 Homo sapiens miR-636 12 80
hsa-miR-585-5p MIMAT0026618 Homo sapiens miR-585-5p 12 80
tni-miR-210 MIMAT0003096 Tetraodon nigroviridis miR-210 12 80
fru-miR-210 MIMAT0003095 Fugu rubripes miR-210 12 80
tni-miR-218a MIMAT0002994 Tetraodon nigroviridis miR-218a 12 80
fru-miR-218a MIMAT0002993 Fugu rubripes miR-218a 12 80
tni-miR-218b MIMAT0002986 Tetraodon nigroviridis miR-218b 12 80
fru-miR-218b MIMAT0002985 Fugu rubripes miR-218b 12 80
mml-miR-218-5p MIMAT0002574 Macaca mulatta miR-218-5p 12 80
mne-miR-218 MIMAT0002573 Macaca nemestrina miR-218 12 80
lla-miR-218 MIMAT0002572 Lagothrix lagotricha miR-218 12 80
sla-miR-218 MIMAT0002571 Saguinus labiatus miR-218 12 80
ptr-miR-218 MIMAT0002570 Pan troglodytes miR-218 12 80
ppy-miR-218 MIMAT0002569 Pongo pygmaeus miR-218 12 80
lca-miR-218 MIMAT0002568 Lemur catta miR-218 12 80
ppa-miR-218 MIMAT0002567 Pan paniscus miR-218 12 80
age-miR-218 MIMAT0002566 Ateles geoffroyi miR-218 12 80
ggo-miR-218 MIMAT0002565 Gorilla gorilla miR-218 12 80
dre-miR-218b MIMAT0001869 Danio rerio miR-218b 12 80
dre-miR-218a MIMAT0001868 Danio rerio miR-218a 12 80
dre-miR-210-3p MIMAT0001281 Danio rerio miR-210-3p 12 80
gga-miR-218-5p MIMAT0001144 Gallus gallus miR-218-5p 12 80
rno-miR-218a-5p MIMAT0000888 Rattus norvegicus miR-218a-5p 12 80
rno-miR-210-3p MIMAT0000881 Rattus norvegicus miR-210-3p 12 80
mmu-miR-218-5p MIMAT0000663 Mus musculus miR-218-5p 12 80
mmu-miR-210-3p MIMAT0000658 Mus musculus miR-210-3p 12 80
hsa-miR-218-5p MIMAT0000275 Homo sapiens miR-218-5p 12 80
hsa-miR-210-3p MIMAT0000267 Homo sapiens miR-210-3p 12 80
>chi-miR-197-5p MIMAT0036034 Capra hircus miR-197-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>cfa-miR-8885 MIMAT0034389 Canis familiaris miR-8885
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>bbe-miR-31-3p MIMAT0031667 Branchiostoma belcheri miR-31-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>hsa-miR-7157-3p MIMAT0028225 Homo sapiens miR-7157-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>mmu-miR-6965-3p MIMAT0027831 Mus musculus miR-6965-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>hsa-miR-6737-3p MIMAT0027376 Homo sapiens miR-6737-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>gga-miR-6565-3p MIMAT0025636 Gallus gallus miR-6565-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>ame-miR-6047b MIMAT0023688 Apis mellifera miR-6047b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctgtgct 7
|||||||
Sbjct: 7 ctgtgct 1
>hvsa-miR-HSUR2-5p MIMAT0022686 Herpesvirus saimiri miR-HSUR2-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>isc-miR-5308 MIMAT0021378 Ixodes scapularis miR-5308
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>mmu-miR-5104 MIMAT0020611 Mus musculus miR-5104
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 1 ctgtgct 7
>hsa-miR-5008-3p MIMAT0021040 Homo sapiens miR-5008-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>dme-miR-4908-3p MIMAT0020514 Drosophila melanogaster
miR-4908-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 1 ctgtgct 7
>bta-miR-2455 MIMAT0012037 Bos taurus miR-2455
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>bfl-miR-31-3p MIMAT0019141 Branchiostoma floridae miR-31-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 1 ctgtgct 7
>gga-miR-1695 MIMAT0007587 Gallus gallus miR-1695
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctgtgct 7
|||||||
Sbjct: 8 ctgtgct 2
>cel-miR-785-5p MIMAT0032015 Caenorhabditis elegans miR-785-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctgtgct 7
|||||||
Sbjct: 7 ctgtgct 1
>osa-miR528-3p MIMAT0022926 Oryza sativa miR528-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctgtgct 7
|||||||
Sbjct: 2 ctgtgct 8
>oha-miR-218-5p MIMAT0036836 Ophiophagus hannah miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>oha-miR-210-3p MIMAT0036827 Ophiophagus hannah miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>tch-miR-218-5p MIMAT0036514 Tupaia chinensis miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>tch-miR-210 MIMAT0036464 Tupaia chinensis miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>mmu-miR-9769-5p MIMAT0036461 Mus musculus miR-9769-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>chi-miR-218 MIMAT0036066 Capra hircus miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>tae-miR9657a-3p MIMAT0035765 Triticum aestivum miR9657a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>efu-miR-218b MIMAT0035068 Eptesicus fuscus miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>efu-miR-218a MIMAT0035036 Eptesicus fuscus miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>efu-miR-19 MIMAT0034994 Eptesicus fuscus miR-19
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>efu-miR-9265 MIMAT0034895 Eptesicus fuscus miR-9265
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 8 tgtgct 3
>efu-miR-9189c MIMAT0034886 Eptesicus fuscus miR-9189c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>eca-miR-9168 MIMAT0034746 Equus caballus miR-9168
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 6 tgtgct 1
>eca-miR-8932 MIMAT0034460 Equus caballus miR-8932
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>cfa-miR-8868 MIMAT0034365 Canis familiaris miR-8868
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 3 ctgtgc 8
>ssa-miR-8157-5p MIMAT0032736 Salmo salar miR-8157-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 7 tgtgct 2
>ssa-miR-218-5p MIMAT0032524 Salmo salar miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ssa-miR-210-3p MIMAT0032509 Salmo salar miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>bbe-miR-210-5p MIMAT0031645 Branchiostoma belcheri miR-210-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>bbe-let-7a-2-3p MIMAT0031862 Branchiostoma belcheri let-7a-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>ppe-miR8133-5p MIMAT0031563 Prunus persica miR8133-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 3 ctgtgc 8
>hsa-miR-8064 MIMAT0030991 Homo sapiens miR-8064
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 6 tgtgct 1
>stu-miR164-3p MIMAT0030973 Solanum tuberosum miR164-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 3 tgtgct 8
>prd-miR-7969-5p MIMAT0030840 Panagrellus redivivus miR-7969-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>oar-miR-218a MIMAT0030045 Ovis aries miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ipu-miR-218b MIMAT0029473 Ictalurus punctatus miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ipu-miR-218a MIMAT0029472 Ictalurus punctatus miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ipu-miR-210 MIMAT0029464 Ictalurus punctatus miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>gga-miR-7470-3p MIMAT0029095 Gallus gallus miR-7470-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 3 ctgtgc 8
>oan-miR-7417-3p MIMAT0028983 Ornithorhynchus anatinus
miR-7417-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 3 tgtgct 8
>oan-miR-7413-5p MIMAT0028974 Ornithorhynchus anatinus
miR-7413-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>oan-miR-7401-5p MIMAT0028944 Ornithorhynchus anatinus
miR-7401-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>ccr-miR-218b MIMAT0026272 Cyprinus carpio miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ccr-miR-218a MIMAT0026271 Cyprinus carpio miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ccr-miR-210 MIMAT0026268 Cyprinus carpio miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>mmu-miR-7026-3p MIMAT0027957 Mus musculus miR-7026-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>mmu-miR-7008-3p MIMAT0027921 Mus musculus miR-7008-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>mmu-miR-7005-3p MIMAT0027915 Mus musculus miR-7005-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>mmu-miR-7002-3p MIMAT0027907 Mus musculus miR-7002-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>gga-miR-3594-5p MIMAT0025641 Gallus gallus miR-3594-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 6 ctgtgc 1
>mmu-miR-6539 MIMAT0025584 Mus musculus miR-6539
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 6 ctgtgc 1
>bta-miR-6526 MIMAT0025556 Bos taurus miR-6526
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 3 ctgtgc 8
>ssc-miR-218 MIMAT0025371 Sus scrofa miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ggo-miR-210 MIMAT0024146 Gorilla gorilla miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>cgr-miR-218a MIMAT0023855 Cricetulus griseus miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>cgr-miR-210-3p MIMAT0023849 Cricetulus griseus miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>ola-miR-218b MIMAT0022609 Oryzias latipes miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ola-miR-218a MIMAT0022529 Oryzias latipes miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>bra-miR5723 MIMAT0023022 Brassica rapa miR5723
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 3 tgtgct 8
>cin-miR-5601-5p MIMAT0022325 Ciona intestinalis miR-5601-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>aca-miR-218-5p MIMAT0021880 Anolis carolinensis miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>aca-miR-210-3p MIMAT0021868 Anolis carolinensis miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>ssc-miR-2320-5p MIMAT0020597 Sus scrofa miR-2320-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>ssc-miR-218b MIMAT0020589 Sus scrofa miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>pma-miR-4568 MIMAT0019600 Petromyzon marinus miR-4568
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 7 tgtgct 2
>pma-miR-218b MIMAT0019531 Petromyzon marinus miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>pma-miR-218a-5p MIMAT0019529 Petromyzon marinus miR-218a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>oar-miR-3957-3p MIMAT0019326 Ovis aries miR-3957-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>tca-miR-3866-5p MIMAT0018824 Tribolium castaneum miR-3866-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>tca-miR-3865-3p MIMAT0018815 Tribolium castaneum miR-3865-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 8 tgtgct 3
>ame-miR-3773 MIMAT0018549 Apis mellifera miR-3773
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 8 tgtgct 3
>ssc-miR-218-5p MIMAT0022961 Sus scrofa miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>cin-miR-4034-5p MIMAT0016557 Ciona intestinalis miR-4034-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 6 ctgtgc 1
>cin-miR-4033-5p MIMAT0016555 Ciona intestinalis miR-4033-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 8 tgtgct 3
>cin-miR-4017-5p MIMAT0016524 Ciona intestinalis miR-4017-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>rno-miR-3590-3p MIMAT0017890 Rattus norvegicus miR-3590-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 7 tgtgct 2
>ppy-miR-1914 MIMAT0016242 Pongo pygmaeus miR-1914
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 3 ctgtgc 8
>ppy-miR-636 MIMAT0016074 Pongo pygmaeus miR-636
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>tgu-miR-218-5p MIMAT0014522 Taeniopygia guttata miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>tgu-miR-1451-5p MIMAT0014451 Taeniopygia guttata miR-1451-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>cqu-miR-988-5p MIMAT0014362 Culex quinquefasciatus miR-988-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 3 tgtgct 8
>aae-miR-988-5p MIMAT0014280 Aedes aegypti miR-988-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>eca-miR-218 MIMAT0012928 Equus caballus miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>cte-miR-210b MIMAT0013572 Capitella teleta miR-210b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>bta-miR-2400 MIMAT0011956 Bos taurus miR-2400
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 8 tgtgct 3
>bta-miR-2320-5p MIMAT0011844 Bos taurus miR-2320-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>cel-miR-2207-3p MIMAT0011426 Caenorhabditis elegans miR-2207-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>sme-miR-2162-5p MIMAT0011256 Schmidtea mediterranea miR-2162-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>mcv-miR-M1-3p MIMAT0010151 Merkel cell miR-M1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>bfl-miR-210-3p MIMAT0009494 Branchiostoma floridae miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>ptr-miR-210 MIMAT0008070 Pan troglodytes miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>hsa-miR-1914-5p MIMAT0007889 Homo sapiens miR-1914-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 3 ctgtgc 8
>ssc-miR-210 MIMAT0007761 Sus scrofa miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>cfa-miR-218 MIMAT0006672 Canis familiaris miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>mml-miR-636 MIMAT0006479 Macaca mulatta miR-636
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>mml-miR-210-3p MIMAT0006240 Macaca mulatta miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>gga-miR-1451-5p MIMAT0007324 Gallus gallus miR-1451-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctgtgc 6
||||||
Sbjct: 8 ctgtgc 3
>oan-miR-218-5p MIMAT0006815 Ornithorhynchus anatinus miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>mdo-miR-218-5p MIMAT0004133 Monodelphis domestica miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>bta-miR-218 MIMAT0003798 Bos taurus miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>xtr-miR-218 MIMAT0003631 Xenopus tropicalis miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>xtr-miR-210 MIMAT0003624 Xenopus tropicalis miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>hsa-miR-636 MIMAT0003306 Homo sapiens miR-636
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 1 tgtgct 6
>hsa-miR-585-5p MIMAT0026618 Homo sapiens miR-585-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtgct 7
||||||
Sbjct: 8 tgtgct 3
>tni-miR-210 MIMAT0003096 Tetraodon nigroviridis miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>fru-miR-210 MIMAT0003095 Fugu rubripes miR-210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>tni-miR-218a MIMAT0002994 Tetraodon nigroviridis miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>fru-miR-218a MIMAT0002993 Fugu rubripes miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>tni-miR-218b MIMAT0002986 Tetraodon nigroviridis miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>fru-miR-218b MIMAT0002985 Fugu rubripes miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>mml-miR-218-5p MIMAT0002574 Macaca mulatta miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>mne-miR-218 MIMAT0002573 Macaca nemestrina miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>lla-miR-218 MIMAT0002572 Lagothrix lagotricha miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>sla-miR-218 MIMAT0002571 Saguinus labiatus miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ptr-miR-218 MIMAT0002570 Pan troglodytes miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ppy-miR-218 MIMAT0002569 Pongo pygmaeus miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>lca-miR-218 MIMAT0002568 Lemur catta miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ppa-miR-218 MIMAT0002567 Pan paniscus miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>age-miR-218 MIMAT0002566 Ateles geoffroyi miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>ggo-miR-218 MIMAT0002565 Gorilla gorilla miR-218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>dre-miR-218b MIMAT0001869 Danio rerio miR-218b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>dre-miR-218a MIMAT0001868 Danio rerio miR-218a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>dre-miR-210-3p MIMAT0001281 Danio rerio miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>gga-miR-218-5p MIMAT0001144 Gallus gallus miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>rno-miR-218a-5p MIMAT0000888 Rattus norvegicus miR-218a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>rno-miR-210-3p MIMAT0000881 Rattus norvegicus miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>mmu-miR-218-5p MIMAT0000663 Mus musculus miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>mmu-miR-210-3p MIMAT0000658 Mus musculus miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
>hsa-miR-218-5p MIMAT0000275 Homo sapiens miR-218-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtgct 7
||||||
Sbjct: 2 tgtgct 7
>hsa-miR-210-3p MIMAT0000267 Homo sapiens miR-210-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctgtgc 6
||||||
Sbjct: 1 ctgtgc 6
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 182
Number of extensions: 164
Number of successful extensions: 138
Number of sequences better than 100.0: 138
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 138
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
