BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tumv-miR-s20
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dvi-miR-1017-3p MIMAT0035558 Drosophila virilis miR-1017-3p 14 20
gma-miR396f MIMAT0021069 Glycine max miR396f 14 20
mmu-miR-3095-5p MIMAT0014911 Mus musculus miR-3095-5p 14 20
crm-miR-80-5p MIMAT0011620 Caenorhabditis remanei miR-80-5p 14 20
nve-miR-2025-5p MIMAT0009759 Nematostella vectensis miR-2025-5p 14 20
dme-miR-1017-3p MIMAT0005030 Drosophila melanogaster miR-1017-3p 14 20
mtr-miR319b-5p MIMAT0026727 Medicago truncatula miR319b-5p 14 20
ppt-miR319d-5p.1 MIMAT0004325 Physcomitrella patens miR319d-5p.1 14 20
cel-miR-80-5p MIMAT0000052 Caenorhabditis elegans miR-80-5p 14 20
oha-miR-208-5p MIMAT0036820 Ophiophagus hannah miR-208-5p 12 80
ptr-miR-518g-3p MIMAT0036455 Pan troglodytes miR-518g-3p 12 80
ggo-miR-518f-3p MIMAT0036417 Gorilla gorilla miR-518f-3p 12 80
chi-miR-9-3p MIMAT0036308 Capra hircus miR-9-3p 12 80
bdi-miR9486a MIMAT0035493 Brachypodium distachyon miR9486a 12 80
efu-miR-30e MIMAT0035136 Eptesicus fuscus miR-30e 12 80
efu-miR-22 MIMAT0035115 Eptesicus fuscus miR-22 12 80
efu-miR-30a MIMAT0034973 Eptesicus fuscus miR-30a 12 80
efu-miR-9-3p MIMAT0034938 Eptesicus fuscus miR-9-3p 12 80
gra-miR7505b MIMAT0033977 Gossypium raimondii miR7505b 12 80
str-miR-8372-3p MIMAT0033381 Strongyloides ratti miR-8372-3p 12 80
ppc-miR-8237-3p MIMAT0032929 Pristionchus pacificus miR-8237-3p 12 80
ppc-miR-8220-3p MIMAT0032875 Pristionchus pacificus miR-8220-3p 12 80
ssa-miR-9a-5-3p MIMAT0032726 Salmo salar miR-9a-5-3p 12 80
ssa-miR-9a-4-3p MIMAT0032725 Salmo salar miR-9a-4-3p 12 80
ssa-miR-736-5p MIMAT0032684 Salmo salar miR-736-5p 12 80
ssa-miR-19d-5p MIMAT0032469 Salmo salar miR-19d-5p 12 80
stu-miR319a-5p MIMAT0031277 Solanum tuberosum miR319a-5p 12 80
prd-miR-9b-3p MIMAT0030577 Panagrellus redivivus miR-9b-3p 12 80
prd-miR-9a-3p MIMAT0030501 Panagrellus redivivus miR-9a-3p 12 80
cbn-miR-79 MIMAT0029748 Caenorhabditis brenneri miR-79 12 80
cbn-miR-75 MIMAT0029747 Caenorhabditis brenneri miR-75 12 80
mmu-miR-7223-5p MIMAT0028414 Mus musculus miR-7223-5p 12 80
gga-miR-6641-5p MIMAT0025737 Gallus gallus miR-6641-5p 12 80
gga-miR-6571-5p MIMAT0025649 Gallus gallus miR-6571-5p 12 80
mmu-miR-6384 MIMAT0025130 Mus musculus miR-6384 12 80
mse-miR-9b MIMAT0024476 Manduca sexta miR-9b 12 80
mse-miR-79 MIMAT0024472 Manduca sexta miR-79 12 80
tca-miR-9e-3p MIMAT0023582 Tribolium castaneum miR-9e-3p 12 80
hco-miR-5946c MIMAT0023471 Haemonchus contortus miR-5946c 12 80
hco-miR-79 MIMAT0023326 Haemonchus contortus miR-79 12 80
ola-miR-9a-3p MIMAT0022537 Oryzias latipes miR-9a-3p 12 80
tur-miR-9-3p MIMAT0023083 Tetranychus urticae miR-9-3p 12 80
aca-miR-9-1-3p MIMAT0021991 Anolis carolinensis miR-9-1-3p 12 80
asu-miR-5361-3p MIMAT0021585 Ascaris suum miR-5361-3p 12 80
asu-miR-79-3p MIMAT0021473 Ascaris suum miR-79-3p 12 80
asu-miR-9-3p MIMAT0021432 Ascaris suum miR-9-3p 12 80
ath-miR5018 MIMAT0020522 Arabidopsis thaliana miR5018 12 80
gma-miR396d MIMAT0018262 Glycine max miR396d 12 80
tca-miR-3893-3p MIMAT0018889 Tribolium castaneum miR-3893-3p 12 80
tca-miR-9d-3p MIMAT0018749 Tribolium castaneum miR-9d-3p 12 80
tca-miR-3843-3p MIMAT0018733 Tribolium castaneum miR-3843-3p 12 80
ame-miR-3790 MIMAT0018569 Apis mellifera miR-3790 12 80
ame-miR-3750 MIMAT0018519 Apis mellifera miR-3750 12 80
hsa-miR-4315 MIMAT0016866 Homo sapiens miR-4315 12 80
cin-miR-4100-5p MIMAT0016684 Ciona intestinalis miR-4100-5p 12 80
cin-miR-4054-3p MIMAT0016598 Ciona intestinalis miR-4054-3p 12 80
ppy-miR-518f MIMAT0015958 Pongo pygmaeus miR-518f 12 80
ppy-miR-518a-3p MIMAT0015952 Pongo pygmaeus miR-518a-3p 12 80
aly-miR319b-5p MIMAT0017431 Arabidopsis lyrata miR319b-5p 12 80
bmo-miR-3356 MIMAT0015542 Bombyx mori miR-3356 12 80
hsa-miR-320e MIMAT0015072 Homo sapiens miR-320e 12 80
hsa-miR-3140-3p MIMAT0015008 Homo sapiens miR-3140-3p 12 80
mmu-miR-3101-3p MIMAT0014922 Mus musculus miR-3101-3p 12 80
api-miR-3041 MIMAT0014779 Acyrthosiphon pisum miR-3041 12 80
tgu-miR-9-3p MIMAT0014627 Taeniopygia guttata miR-9-3p 12 80
cqu-miR-9-3p MIMAT0014381 Culex quinquefasciatus miR-9-3p 12 80
aae-miR-9c-3p MIMAT0014213 Aedes aegypti miR-9c-3p 12 80
bma-miR-9-3p MIMAT0014108 Brugia malayi miR-9-3p 12 80
bmo-miR-9d MIMAT0013620 Bombyx mori miR-9d 12 80
isc-miR-79 MIMAT0012705 Ixodes scapularis miR-79 12 80
dpu-miR-9-3p MIMAT0012668 Daphnia pulex miR-9-3p 12 80
dps-miR-2551-3p MIMAT0012363 Drosophila pseudoobscura miR-2551-3p 12 80
bta-miR-2322-5p MIMAT0011850 Bos taurus miR-2322-5p 12 80
ppc-miR-79 MIMAT0011652 Pristionchus pacificus miR-79 12 80
crm-miR-79-3p MIMAT0011556 Caenorhabditis remanei miR-79-3p 12 80
crm-miR-75 MIMAT0011521 Caenorhabditis remanei miR-75 12 80
cel-miR-2219-5p MIMAT0011459 Caenorhabditis elegans miR-2219-5p 12 80
lmi-miR-9a-3p MIMAT0010147 Locusta migratoria miR-9a-3p 12 80
bmo-miR-993b-3p MIMAT0010128 Bombyx mori miR-993b-3p 12 80
tca-miR-9a-3p MIMAT0019177 Tribolium castaneum miR-9a-3p 12 80
osa-miR2099-3p MIMAT0010063 Oryza sativa miR2099-3p 12 80
bfl-miR-9-3p MIMAT0009477 Branchiostoma floridae miR-9-3p 12 80
spu-miR-9-3p MIMAT0009661 Strongylocentrotus purpuratus miR-9-3p 12 80
sko-miR-9-3p MIMAT0009618 Saccoglossus kowalevskii miR-9-3p 12 80
lgi-miR-9-3p MIMAT0009572 Lottia gigantea miR-9-3p 12 80
bta-miR-9-3p MIMAT0012549 Bos taurus miR-9-3p 12 80
dya-miR-4 MIMAT0009058 Drosophila yakuba miR-4 12 80
dwi-miR-4 MIMAT0009049 Drosophila willistoni miR-4 12 80
dvi-miR-4-3p MIMAT0008956 Drosophila virilis miR-4-3p 12 80
dvi-miR-9c-3p MIMAT0032054 Drosophila virilis miR-9c-3p 12 80
dsi-miR-4 MIMAT0008842 Drosophila simulans miR-4 12 80
dse-miR-4 MIMAT0008835 Drosophila sechellia miR-4 12 80
dpe-miR-4 MIMAT0008751 Drosophila persimilis miR-4 12 80
dmo-miR-4 MIMAT0008629 Drosophila mojavensis miR-4 12 80
dgr-miR-4 MIMAT0008594 Drosophila grimshawi miR-4 12 80
der-miR-4 MIMAT0008532 Drosophila erecta miR-4 12 80
dan-miR-4 MIMAT0008427 Drosophila ananassae miR-4 12 80
tca-miR-9b-3p MIMAT0019135 Tribolium castaneum miR-9b-3p 12 80
ptr-miR-518f MIMAT0008191 Pan troglodytes miR-518f 12 80
ptr-miR-518a MIMAT0008186 Pan troglodytes miR-518a 12 80
mml-miR-9-3p MIMAT0026796 Macaca mulatta miR-9-3p 12 80
gga-miR-1462-5p MIMAT0007340 Gallus gallus miR-1462-5p 12 80
rno-miR-742-3p MIMAT0005333 Rattus norvegicus miR-742-3p 12 80
mdo-miR-9a-3p MIMAT0004088 Monodelphis domestica miR-9a-3p 12 80
mmu-miR-742-3p MIMAT0004237 Mus musculus miR-742-3p 12 80
sme-miR-79-3p MIMAT0003988 Schmidtea mediterranea miR-79-3p 12 80
bmo-miR-9a-3p MIMAT0015225 Bombyx mori miR-9a-3p 12 80
mmu-miR-693-3p MIMAT0004189 Mus musculus miR-693-3p 12 80
osa-miR535-3p MIMAT0022927 Oryza sativa miR535-3p 12 80
hsa-miR-518a-3p MIMAT0002863 Homo sapiens miR-518a-3p 12 80
hsa-miR-518f-3p MIMAT0002842 Homo sapiens miR-518f-3p 12 80
ptc-miR474c MIMAT0002066 Populus trichocarpa miR474c 12 80
dre-miR-19d-5p MIMAT0031941 Danio rerio miR-19d-5p 12 80
dps-miR-4 MIMAT0001204 Drosophila pseudoobscura miR-4 12 80
rno-miR-9a-3p MIMAT0004708 Rattus norvegicus miR-9a-3p 12 80
cbr-miR-79 MIMAT0000486 Caenorhabditis briggsae miR-79 12 80
cbr-miR-75 MIMAT0000484 Caenorhabditis briggsae miR-75 12 80
hsa-miR-9-3p MIMAT0000442 Homo sapiens miR-9-3p 12 80
dme-miR-9c-3p MIMAT0020828 Drosophila melanogaster miR-9c-3p 12 80
cel-miR-261 MIMAT0000316 Caenorhabditis elegans miR-261 12 80
mmu-miR-9-3p MIMAT0000143 Mus musculus miR-9-3p 12 80
dme-miR-4-3p MIMAT0000109 Drosophila melanogaster miR-4-3p 12 80
cel-miR-90-5p MIMAT0020326 Caenorhabditis elegans miR-90-5p 12 80
cel-miR-79-3p MIMAT0000051 Caenorhabditis elegans miR-79-3p 12 80
cel-miR-75-3p MIMAT0000047 Caenorhabditis elegans miR-75-3p 12 80
>dvi-miR-1017-3p MIMAT0035558 Drosophila virilis miR-1017-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gaaagct 7
|||||||
Sbjct: 1 gaaagct 7
>gma-miR396f MIMAT0021069 Glycine max miR396f
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 7 gaaagct 1
>mmu-miR-3095-5p MIMAT0014911 Mus musculus miR-3095-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 8 gaaagct 2
>crm-miR-80-5p MIMAT0011620 Caenorhabditis remanei miR-80-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 7 gaaagct 1
>nve-miR-2025-5p MIMAT0009759 Nematostella vectensis miR-2025-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 7 gaaagct 1
>dme-miR-1017-3p MIMAT0005030 Drosophila melanogaster
miR-1017-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gaaagct 7
|||||||
Sbjct: 1 gaaagct 7
>mtr-miR319b-5p MIMAT0026727 Medicago truncatula miR319b-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 8 gaaagct 2
>ppt-miR319d-5p.1 MIMAT0004325 Physcomitrella patens
miR319d-5p.1
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 8 gaaagct 2
>cel-miR-80-5p MIMAT0000052 Caenorhabditis elegans miR-80-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gaaagct 7
|||||||
Sbjct: 7 gaaagct 1
>oha-miR-208-5p MIMAT0036820 Ophiophagus hannah miR-208-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 6 aaagct 1
>ptr-miR-518g-3p MIMAT0036455 Pan troglodytes miR-518g-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>ggo-miR-518f-3p MIMAT0036417 Gorilla gorilla miR-518f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>chi-miR-9-3p MIMAT0036308 Capra hircus miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>bdi-miR9486a MIMAT0035493 Brachypodium distachyon miR9486a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 8 gaaagc 3
>efu-miR-30e MIMAT0035136 Eptesicus fuscus miR-30e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 6 gaaagc 1
>efu-miR-22 MIMAT0035115 Eptesicus fuscus miR-22
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 1 aaagct 6
>efu-miR-30a MIMAT0034973 Eptesicus fuscus miR-30a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 6 gaaagc 1
>efu-miR-9-3p MIMAT0034938 Eptesicus fuscus miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>gra-miR7505b MIMAT0033977 Gossypium raimondii miR7505b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>str-miR-8372-3p MIMAT0033381 Strongyloides ratti miR-8372-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ppc-miR-8237-3p MIMAT0032929 Pristionchus pacificus miR-8237-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ppc-miR-8220-3p MIMAT0032875 Pristionchus pacificus miR-8220-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ssa-miR-9a-5-3p MIMAT0032726 Salmo salar miR-9a-5-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ssa-miR-9a-4-3p MIMAT0032725 Salmo salar miR-9a-4-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ssa-miR-736-5p MIMAT0032684 Salmo salar miR-736-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 8 gaaagc 3
>ssa-miR-19d-5p MIMAT0032469 Salmo salar miR-19d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 6 aaagct 1
>stu-miR319a-5p MIMAT0031277 Solanum tuberosum miR319a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>prd-miR-9b-3p MIMAT0030577 Panagrellus redivivus miR-9b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>prd-miR-9a-3p MIMAT0030501 Panagrellus redivivus miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cbn-miR-79 MIMAT0029748 Caenorhabditis brenneri miR-79
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cbn-miR-75 MIMAT0029747 Caenorhabditis brenneri miR-75
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>mmu-miR-7223-5p MIMAT0028414 Mus musculus miR-7223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 7 aaagct 2
>gga-miR-6641-5p MIMAT0025737 Gallus gallus miR-6641-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>gga-miR-6571-5p MIMAT0025649 Gallus gallus miR-6571-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>mmu-miR-6384 MIMAT0025130 Mus musculus miR-6384
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 6 gaaagc 1
>mse-miR-9b MIMAT0024476 Manduca sexta miR-9b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>mse-miR-79 MIMAT0024472 Manduca sexta miR-79
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>tca-miR-9e-3p MIMAT0023582 Tribolium castaneum miR-9e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>hco-miR-5946c MIMAT0023471 Haemonchus contortus miR-5946c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>hco-miR-79 MIMAT0023326 Haemonchus contortus miR-79
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ola-miR-9a-3p MIMAT0022537 Oryzias latipes miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>tur-miR-9-3p MIMAT0023083 Tetranychus urticae miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>aca-miR-9-1-3p MIMAT0021991 Anolis carolinensis miR-9-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>asu-miR-5361-3p MIMAT0021585 Ascaris suum miR-5361-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 1 aaagct 6
>asu-miR-79-3p MIMAT0021473 Ascaris suum miR-79-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>asu-miR-9-3p MIMAT0021432 Ascaris suum miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ath-miR5018 MIMAT0020522 Arabidopsis thaliana miR5018
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>gma-miR396d MIMAT0018262 Glycine max miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 3 gaaagc 8
>tca-miR-3893-3p MIMAT0018889 Tribolium castaneum miR-3893-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>tca-miR-9d-3p MIMAT0018749 Tribolium castaneum miR-9d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>tca-miR-3843-3p MIMAT0018733 Tribolium castaneum miR-3843-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ame-miR-3790 MIMAT0018569 Apis mellifera miR-3790
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>ame-miR-3750 MIMAT0018519 Apis mellifera miR-3750
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 2 aaagct 7
>hsa-miR-4315 MIMAT0016866 Homo sapiens miR-4315
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 8 gaaagc 3
>cin-miR-4100-5p MIMAT0016684 Ciona intestinalis miR-4100-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>cin-miR-4054-3p MIMAT0016598 Ciona intestinalis miR-4054-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 6 aaagct 1
>ppy-miR-518f MIMAT0015958 Pongo pygmaeus miR-518f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>ppy-miR-518a-3p MIMAT0015952 Pongo pygmaeus miR-518a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>aly-miR319b-5p MIMAT0017431 Arabidopsis lyrata miR319b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>bmo-miR-3356 MIMAT0015542 Bombyx mori miR-3356
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>hsa-miR-320e MIMAT0015072 Homo sapiens miR-320e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 1 aaagct 6
>hsa-miR-3140-3p MIMAT0015008 Homo sapiens miR-3140-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 6 aaagct 1
>mmu-miR-3101-3p MIMAT0014922 Mus musculus miR-3101-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 7 aaagct 2
>api-miR-3041 MIMAT0014779 Acyrthosiphon pisum miR-3041
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>tgu-miR-9-3p MIMAT0014627 Taeniopygia guttata miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cqu-miR-9-3p MIMAT0014381 Culex quinquefasciatus miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 2 aaagct 7
>aae-miR-9c-3p MIMAT0014213 Aedes aegypti miR-9c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 2 aaagct 7
>bma-miR-9-3p MIMAT0014108 Brugia malayi miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>bmo-miR-9d MIMAT0013620 Bombyx mori miR-9d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>isc-miR-79 MIMAT0012705 Ixodes scapularis miR-79
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dpu-miR-9-3p MIMAT0012668 Daphnia pulex miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dps-miR-2551-3p MIMAT0012363 Drosophila pseudoobscura
miR-2551-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 2 aaagct 7
>bta-miR-2322-5p MIMAT0011850 Bos taurus miR-2322-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 3 gaaagc 8
>ppc-miR-79 MIMAT0011652 Pristionchus pacificus miR-79
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>crm-miR-79-3p MIMAT0011556 Caenorhabditis remanei miR-79-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>crm-miR-75 MIMAT0011521 Caenorhabditis remanei miR-75
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cel-miR-2219-5p MIMAT0011459 Caenorhabditis elegans miR-2219-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>lmi-miR-9a-3p MIMAT0010147 Locusta migratoria miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>bmo-miR-993b-3p MIMAT0010128 Bombyx mori miR-993b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 1 aaagct 6
>tca-miR-9a-3p MIMAT0019177 Tribolium castaneum miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>osa-miR2099-3p MIMAT0010063 Oryza sativa miR2099-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>bfl-miR-9-3p MIMAT0009477 Branchiostoma floridae miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>spu-miR-9-3p MIMAT0009661 Strongylocentrotus purpuratus
miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>sko-miR-9-3p MIMAT0009618 Saccoglossus kowalevskii miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>lgi-miR-9-3p MIMAT0009572 Lottia gigantea miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>bta-miR-9-3p MIMAT0012549 Bos taurus miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dya-miR-4 MIMAT0009058 Drosophila yakuba miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dwi-miR-4 MIMAT0009049 Drosophila willistoni miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dvi-miR-4-3p MIMAT0008956 Drosophila virilis miR-4-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dvi-miR-9c-3p MIMAT0032054 Drosophila virilis miR-9c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 2 aaagct 7
>dsi-miR-4 MIMAT0008842 Drosophila simulans miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dse-miR-4 MIMAT0008835 Drosophila sechellia miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dpe-miR-4 MIMAT0008751 Drosophila persimilis miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dmo-miR-4 MIMAT0008629 Drosophila mojavensis miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dgr-miR-4 MIMAT0008594 Drosophila grimshawi miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>der-miR-4 MIMAT0008532 Drosophila erecta miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dan-miR-4 MIMAT0008427 Drosophila ananassae miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>tca-miR-9b-3p MIMAT0019135 Tribolium castaneum miR-9b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>ptr-miR-518f MIMAT0008191 Pan troglodytes miR-518f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>ptr-miR-518a MIMAT0008186 Pan troglodytes miR-518a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>mml-miR-9-3p MIMAT0026796 Macaca mulatta miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>gga-miR-1462-5p MIMAT0007340 Gallus gallus miR-1462-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 8 gaaagc 3
>rno-miR-742-3p MIMAT0005333 Rattus norvegicus miR-742-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>mdo-miR-9a-3p MIMAT0004088 Monodelphis domestica miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>mmu-miR-742-3p MIMAT0004237 Mus musculus miR-742-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>sme-miR-79-3p MIMAT0003988 Schmidtea mediterranea miR-79-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>bmo-miR-9a-3p MIMAT0015225 Bombyx mori miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>mmu-miR-693-3p MIMAT0004189 Mus musculus miR-693-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 8 aaagct 3
>osa-miR535-3p MIMAT0022927 Oryza sativa miR535-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 8 gaaagc 3
>hsa-miR-518a-3p MIMAT0002863 Homo sapiens miR-518a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>hsa-miR-518f-3p MIMAT0002842 Homo sapiens miR-518f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gaaagc 6
||||||
Sbjct: 1 gaaagc 6
>ptc-miR474c MIMAT0002066 Populus trichocarpa miR474c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dre-miR-19d-5p MIMAT0031941 Danio rerio miR-19d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 6 aaagct 1
>dps-miR-4 MIMAT0001204 Drosophila pseudoobscura miR-4
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>rno-miR-9a-3p MIMAT0004708 Rattus norvegicus miR-9a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cbr-miR-79 MIMAT0000486 Caenorhabditis briggsae miR-79
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cbr-miR-75 MIMAT0000484 Caenorhabditis briggsae miR-75
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>hsa-miR-9-3p MIMAT0000442 Homo sapiens miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dme-miR-9c-3p MIMAT0020828 Drosophila melanogaster miR-9c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 2 aaagct 7
>cel-miR-261 MIMAT0000316 Caenorhabditis elegans miR-261
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaagct 7
||||||
Sbjct: 7 aaagct 2
>mmu-miR-9-3p MIMAT0000143 Mus musculus miR-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>dme-miR-4-3p MIMAT0000109 Drosophila melanogaster miR-4-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cel-miR-90-5p MIMAT0020326 Caenorhabditis elegans miR-90-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gaaagc 6
||||||
Sbjct: 8 gaaagc 3
>cel-miR-79-3p MIMAT0000051 Caenorhabditis elegans miR-79-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
>cel-miR-75-3p MIMAT0000047 Caenorhabditis elegans miR-75-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaagct 7
||||||
Sbjct: 3 aaagct 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 227
Number of extensions: 218
Number of successful extensions: 125
Number of sequences better than 100.0: 125
Number of HSP's gapped: 125
Number of HSP's successfully gapped: 125
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
