VIRmiRNA

BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prv-miR-11-1
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

eca-miR-9013 MIMAT0034554 Equus caballus miR-9013                      14      20
gga-miR-1572 MIMAT0007432 Gallus gallus miR-1572                       14      20
chi-miR-2284d MIMAT0036080 Capra hircus miR-2284d                      12      80
efu-miR-9252 MIMAT0034870 Eptesicus fuscus miR-9252                    12      80
cel-miR-4810b-5p MIMAT0032821 Caenorhabditis elegans miR-4810b-5p      12      80
cpa-miR8150 MIMAT0031847 Carica papaya miR8150                         12      80
prd-miR-7947-3p MIMAT0030759 Panagrellus redivivus miR-7947-3p         12      80
bta-miR-2285ac MIMAT0030440 Bos taurus miR-2285ac                      12      80
bta-miR-2285ab MIMAT0030436 Bos taurus miR-2285ab                      12      80
mtr-miR7701-3p MIMAT0030016 Medicago truncatula miR7701-3p             12      80
mdo-miR-7331-5p MIMAT0028668 Monodelphis domestica miR-7331-5p         12      80
mmu-miR-7218-3p MIMAT0028405 Mus musculus miR-7218-3p                  12      80
mml-miR-7199-3p MIMAT0028363 Macaca mulatta miR-7199-3p                12      80
mmu-miR-7010-3p MIMAT0027925 Mus musculus miR-7010-3p                  12      80
gga-miR-6651-5p MIMAT0025751 Gallus gallus miR-6651-5p                 12      80
rno-miR-6317 MIMAT0025054 Rattus norvegicus miR-6317                   12      80
hme-miR-6306-5p MIMAT0025012 Heliconius melpomene miR-6306-5p          12      80
bta-miR-2285f MIMAT0024581 Bos taurus miR-2285f                        12      80
cgr-miR-152-5p MIMAT0023784 Cricetulus griseus miR-152-5p              12      80
pti-miR5474 MIMAT0022107 Phaeodactylum tricornutum miR5474             12      80
aca-miR-221-5p MIMAT0021889 Anolis carolinensis miR-221-5p             12      80
asu-miR-5351-5p MIMAT0021560 Ascaris suum miR-5351-5p                  12      80
asu-miR-100e-5p MIMAT0021542 Ascaris suum miR-100e-5p                  12      80
bdi-miR169c-3p MIMAT0027073 Brachypodium distachyon miR169c-3p         12      80
ppy-miR-634 MIMAT0016073 Pongo pygmaeus miR-634                        12      80
bmo-miR-3387-3p MIMAT0015586 Bombyx mori miR-3387-3p                   12      80
rno-miR-582-3p MIMAT0017360 Rattus norvegicus miR-582-3p               12      80
dps-miR-2567b-5p MIMAT0012402 Drosophila pseudoobscura miR-2567b-5p    12      80
dps-miR-2567a-5p MIMAT0012396 Drosophila pseudoobscura miR-2567a-5p    12      80
bta-miR-2312 MIMAT0011828 Bos taurus miR-2312                          12      80
cbr-miR-35d-5p MIMAT0011469 Caenorhabditis briggsae miR-35d-5p