BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= dev-miR-d6-5p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

efu-miR-9294 MIMAT0034955 Eptesicus fuscus miR-9294                    14      20
dev-miR-D6-5p MIMAT0028175 Duck enteritis miR-D6-5p                    14      20
mmu-miR-6903-3p MIMAT0027707 Mus musculus miR-6903-3p                  14      20
ssc-miR-9855-5p MIMAT0037074 Sus scrofa miR-9855-5p                    12      80
ssc-miR-9854-5p MIMAT0037073 Sus scrofa miR-9854-5p                    12      80
ssc-miR-9831-3p MIMAT0037049 Sus scrofa miR-9831-3p                    12      80
oha-miR-599 MIMAT0036944 Ophiophagus hannah miR-599                    12      80
nve-miR-9445 MIMAT0035406 Nematostella vectensis miR-9445              12      80
dme-miR-9384-3p MIMAT0035232 Drosophila melanogaster miR-9384-3p       12      80
efu-miR-9229f MIMAT0034847 Eptesicus fuscus miR-9229f                  12      80
bdi-miR7742-3p MIMAT0030225 Brachypodium distachyon miR7742-3p         12      80
lva-miR-2004-3p MIMAT0032225 Lytechinus variegatus miR-2004-3p         12      80
pmi-miR-2004-3p MIMAT0032177 Patiria miniata miR-2004-3p               12      80
oan-miR-7421-5p MIMAT0028992 Ornithorhynchus anatinus miR-7421-5p      12      80
mmu-miR-7212-3p MIMAT0028393 Mus musculus miR-7212-3p                  12      80
sbi-miR6234b-5p MIMAT0026452 Sorghum bicolor miR6234b-5p               12      80
sbi-miR6234a-5p MIMAT0026450 Sorghum bicolor miR6234a-5p               12      80
mmu-miR-6995-3p MIMAT0027893 Mus musculus miR-6995-3p                  12      80
hsa-miR-6867-5p MIMAT0027634 Homo sapiens miR-6867-5p                  12      80
ppe-miR6277 MIMAT0027306 Prunus persica miR6277                        12      80
tur-miR-5731-5p MIMAT0023056 Tetranychus urticae miR-5731-5p           12      80
hsa-miR-4669 MIMAT0019749 Homo sapiens miR-4669                        12      80
hsa-miR-4643 MIMAT0019703 Homo sapiens miR-4643                        12      80
pma-miR-4571-3p MIMAT0019604 Petromyzon marinus miR-4571-3p            12      80
hsa-miR-3941 MIMAT0018357 Homo sapiens miR-3941                        12      80
tca-miR-3882-5p MIMAT0018860 Tribolium castaneum miR-3882-5p           12      80
tca-miR-3853-5p MIMAT0018762 Tribolium castaneum miR-3853-5p           12      80
hsa-miR-3657 MIMAT0018077 Homo sapiens miR-3657                        12      80
hsa-miR-3650 MIMAT0018070 Homo sapiens miR-3650                        12      80
cin-miR-4202-5p MIMAT0016822 Ciona intestinalis miR-4202-5p            12      80
cin-miR-4181-5p MIMAT0016794 Ciona intestinalis miR-4181-5p            12      80
rno-miR-3576 MIMAT0017862 Rattus norvegicus miR-3576                   12      80
rno-miR-3561-5p MIMAT0017830 Rattus norvegicus miR-3561-5p             12      80
rno-miR-466d MIMAT0017824 Rattus norvegicus miR-466d                   12      80
ppy-miR-599 MIMAT0016041 Pongo pygmaeus miR-599                        12      80
ppy-miR-597 MIMAT0016039 Pongo pygmaeus miR-597                        12      80
mmu-miR-466n-5p MIMAT0014893 Mus musculus miR-466n-5p                  12      80
zma-miR164e-3p MIMAT0015317 Zea mays miR164e-3p                        12      80
rno-miR-592 MIMAT0012834 Rattus norvegicus miR-592                     12      80
mdo-miR-599-3p MIMAT0012765 Monodelphis domestica miR-599-3p           12      80
dps-miR-2559-5p MIMAT0012380 Drosophila pseudoobscura miR-2559-5p      12      80
dme-miR-2493-3p MIMAT0012201 Drosophila melanogaster miR-2493-3p       12      80
ppt-miR2082 MIMAT0010021 Physcomitrella patens miR2082                 12      80
cfa-miR-599 MIMAT0009919 Canis familiaris miR-599                      12      80
cfa-miR-592 MIMAT0009918 Canis familiaris miR-592                      12      80
spu-miR-2004 MIMAT0009745 Strongylocentrotus purpuratus miR-2004       12      80
mmu-miR-1970 MIMAT0009444 Mus musculus miR-1970                        12      80
bta-miR-599 MIMAT0009354 Bos taurus miR-599                            12      80
bta-miR-592 MIMAT0009353 Bos taurus miR-592                            12      80
ptr-miR-599 MIMAT0008268 Pan troglodytes miR-599                       12      80
ptr-miR-597 MIMAT0008266 Pan troglodytes miR-597                       12      80
osa-miR1850.2 MIMAT0009210 Oryza sativa miR1850.2                      12      80
mml-miR-599-3p MIMAT0006456 Macaca mulatta miR-599-3p                  12      80
mml-miR-597 MIMAT0006454 Macaca mulatta miR-597                        12      80
mml-miR-147a MIMAT0006206 Macaca mulatta miR-147a                      12      80
mmu-miR-466k MIMAT0005845 Mus musculus miR-466k                        12      80
mmu-miR-466f MIMAT0005844 Mus musculus miR-466f                        12      80
mmu-miR-466i-3p MIMAT0005834 Mus musculus miR-466i-3p                  12      80
mmu-miR-466i-5p MIMAT0017325 Mus musculus miR-466i-5p                  12      80
mmu-miR-466l-5p MIMAT0017322 Mus musculus miR-466l-5p                  12      80
rno-miR-672-3p MIMAT0017312 Rattus norvegicus miR-672-3p               12      80
hsa-miR-216b-3p MIMAT0026721 Homo sapiens miR-216b-3p                  12      80
mmu-miR-466d-5p MIMAT0004930 Mus musculus miR-466d-5p                  12      80
mmu-miR-672-3p MIMAT0017241 Mus musculus miR-672-3p                    12      80
mmu-miR-592-5p MIMAT0003730 Mus musculus miR-592-5p                    12      80
hsa-miR-599 MIMAT0003267 Homo sapiens miR-599                          12      80
hsa-miR-597-5p MIMAT0003265 Homo sapiens miR-597-5p                    12      80
ppa-miR-147 MIMAT0002478 Pan paniscus miR-147                          12      80
mne-miR-147 MIMAT0002477 Macaca nemestrina miR-147                     12      80
sla-miR-147 MIMAT0002476 Saguinus labiatus miR-147                     12      80
ppy-miR-147a MIMAT0002475 Pongo pygmaeus miR-147a                      12      80
ptr-miR-147a MIMAT0002474 Pan troglodytes miR-147a                     12      80
hsa-miR-147a MIMAT0000251 Homo sapiens miR-147a                        12      80
>efu-miR-9294 MIMAT0034955 Eptesicus fuscus miR-9294
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gacacac 7
         |||||||
Sbjct: 7 gacacac 1
>dev-miR-D6-5p MIMAT0028175 Duck enteritis miR-D6-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gacacac 7
         |||||||
Sbjct: 2 gacacac 8
>mmu-miR-6903-3p MIMAT0027707 Mus musculus miR-6903-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gacacac 7
         |||||||
Sbjct: 8 gacacac 2
>ssc-miR-9855-5p MIMAT0037074 Sus scrofa miR-9855-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>ssc-miR-9854-5p MIMAT0037073 Sus scrofa miR-9854-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>ssc-miR-9831-3p MIMAT0037049 Sus scrofa miR-9831-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>oha-miR-599 MIMAT0036944 Ophiophagus hannah miR-599
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>nve-miR-9445 MIMAT0035406 Nematostella vectensis miR-9445
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>dme-miR-9384-3p MIMAT0035232 Drosophila melanogaster
         miR-9384-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>efu-miR-9229f MIMAT0034847 Eptesicus fuscus miR-9229f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>bdi-miR7742-3p MIMAT0030225 Brachypodium distachyon miR7742-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>lva-miR-2004-3p MIMAT0032225 Lytechinus variegatus miR-2004-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 3 acacac 8
>pmi-miR-2004-3p MIMAT0032177 Patiria miniata miR-2004-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 3 acacac 8
>oan-miR-7421-5p MIMAT0028992 Ornithorhynchus anatinus
         miR-7421-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>mmu-miR-7212-3p MIMAT0028393 Mus musculus miR-7212-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 3 acacac 8
>sbi-miR6234b-5p MIMAT0026452 Sorghum bicolor miR6234b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>sbi-miR6234a-5p MIMAT0026450 Sorghum bicolor miR6234a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>mmu-miR-6995-3p MIMAT0027893 Mus musculus miR-6995-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>hsa-miR-6867-5p MIMAT0027634 Homo sapiens miR-6867-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>ppe-miR6277 MIMAT0027306 Prunus persica miR6277
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>tur-miR-5731-5p MIMAT0023056 Tetranychus urticae miR-5731-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 1 gacaca 6
>hsa-miR-4669 MIMAT0019749 Homo sapiens miR-4669
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>hsa-miR-4643 MIMAT0019703 Homo sapiens miR-4643
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 1 gacaca 6
>pma-miR-4571-3p MIMAT0019604 Petromyzon marinus miR-4571-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>hsa-miR-3941 MIMAT0018357 Homo sapiens miR-3941
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 3 acacac 8
>tca-miR-3882-5p MIMAT0018860 Tribolium castaneum miR-3882-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 3 gacaca 8
>tca-miR-3853-5p MIMAT0018762 Tribolium castaneum miR-3853-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>hsa-miR-3657 MIMAT0018077 Homo sapiens miR-3657
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>hsa-miR-3650 MIMAT0018070 Homo sapiens miR-3650
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>cin-miR-4202-5p MIMAT0016822 Ciona intestinalis miR-4202-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>cin-miR-4181-5p MIMAT0016794 Ciona intestinalis miR-4181-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>rno-miR-3576 MIMAT0017862 Rattus norvegicus miR-3576
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 1 acacac 6
>rno-miR-3561-5p MIMAT0017830 Rattus norvegicus miR-3561-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>rno-miR-466d MIMAT0017824 Rattus norvegicus miR-466d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>ppy-miR-599 MIMAT0016041 Pongo pygmaeus miR-599
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>ppy-miR-597 MIMAT0016039 Pongo pygmaeus miR-597
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>mmu-miR-466n-5p MIMAT0014893 Mus musculus miR-466n-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>zma-miR164e-3p MIMAT0015317 Zea mays miR164e-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>rno-miR-592 MIMAT0012834 Rattus norvegicus miR-592
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>mdo-miR-599-3p MIMAT0012765 Monodelphis domestica miR-599-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>dps-miR-2559-5p MIMAT0012380 Drosophila pseudoobscura
         miR-2559-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>dme-miR-2493-3p MIMAT0012201 Drosophila melanogaster
         miR-2493-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>ppt-miR2082 MIMAT0010021 Physcomitrella patens miR2082
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>cfa-miR-599 MIMAT0009919 Canis familiaris miR-599
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>cfa-miR-592 MIMAT0009918 Canis familiaris miR-592
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>spu-miR-2004 MIMAT0009745 Strongylocentrotus purpuratus
         miR-2004
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 3 acacac 8
>mmu-miR-1970 MIMAT0009444 Mus musculus miR-1970
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>bta-miR-599 MIMAT0009354 Bos taurus miR-599
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>bta-miR-592 MIMAT0009353 Bos taurus miR-592
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>ptr-miR-599 MIMAT0008268 Pan troglodytes miR-599
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>ptr-miR-597 MIMAT0008266 Pan troglodytes miR-597
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>osa-miR1850.2 MIMAT0009210 Oryza sativa miR1850.2
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>mml-miR-599-3p MIMAT0006456 Macaca mulatta miR-599-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>mml-miR-597 MIMAT0006454 Macaca mulatta miR-597
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>mml-miR-147a MIMAT0006206 Macaca mulatta miR-147a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>mmu-miR-466k MIMAT0005845 Mus musculus miR-466k
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>mmu-miR-466f MIMAT0005844 Mus musculus miR-466f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>mmu-miR-466i-3p MIMAT0005834 Mus musculus miR-466i-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 3 acacac 8
>mmu-miR-466i-5p MIMAT0017325 Mus musculus miR-466i-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>mmu-miR-466l-5p MIMAT0017322 Mus musculus miR-466l-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 8 acacac 3
>rno-miR-672-3p MIMAT0017312 Rattus norvegicus miR-672-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 1 acacac 6
>hsa-miR-216b-3p MIMAT0026721 Homo sapiens miR-216b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 1 acacac 6
>mmu-miR-466d-5p MIMAT0004930 Mus musculus miR-466d-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 7 acacac 2
>mmu-miR-672-3p MIMAT0017241 Mus musculus miR-672-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acacac 7
         ||||||
Sbjct: 1 acacac 6
>mmu-miR-592-5p MIMAT0003730 Mus musculus miR-592-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>hsa-miR-599 MIMAT0003267 Homo sapiens miR-599
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 8 gacaca 3
>hsa-miR-597-5p MIMAT0003265 Homo sapiens miR-597-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 gacaca 6
         ||||||
Sbjct: 6 gacaca 1
>ppa-miR-147 MIMAT0002478 Pan paniscus miR-147
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>mne-miR-147 MIMAT0002477 Macaca nemestrina miR-147
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>sla-miR-147 MIMAT0002476 Saguinus labiatus miR-147
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>ppy-miR-147a MIMAT0002475 Pongo pygmaeus miR-147a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>ptr-miR-147a MIMAT0002474 Pan troglodytes miR-147a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
>hsa-miR-147a MIMAT0000251 Homo sapiens miR-147a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acacac 7
         ||||||
Sbjct: 6 acacac 1
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 125
Number of extensions: 122
Number of successful extensions: 73
Number of sequences better than 100.0: 73
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 73
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)