BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= iltv-miR-i1
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ppc-miR-8271-5p MIMAT0033035 Pristionchus pacificus miR-8271-5p        14      20
ssa-miR-29b-2-5p MIMAT0032587 Salmo salar miR-29b-2-5p                 14      20
mml-miR-873-3p MIMAT0027106 Macaca mulatta miR-873-3p                  14      20
iltv-miR-I1-5p MIMAT0012723 Infectious laryngotracheitis miR-I1-5p     14      20
bta-miR-2298 MIMAT0011806 Bos taurus miR-2298                          14      20
mmu-miR-468-5p MIMAT0022699 Mus musculus miR-468-5p                    14      20
oha-miR-29a-1-5p MIMAT0036876 Ophiophagus hannah miR-29a-1-5p          12      80
gma-miR319q MIMAT0036398 Glycine max miR319q                           12      80
gma-miR319o MIMAT0036377 Glycine max miR319o                           12      80
chi-miR-3431-5p MIMAT0036159 Capra hircus miR-3431-5p                  12      80
chi-miR-30d-3p MIMAT0036127 Capra hircus miR-30d-3p                    12      80
chi-miR-29a-5p MIMAT0036112 Capra hircus miR-29a-5p                    12      80
rno-miR-452-3p MIMAT0035749 Rattus norvegicus miR-452-3p               12      80
bdi-miR9481b MIMAT0035499 Brachypodium distachyon miR9481b             12      80
bdi-miR9481a MIMAT0035487 Brachypodium distachyon miR9481a             12      80
gsa-miR-9-3p MIMAT0035289 Gyrodactylus salaris miR-9-3p                12      80
efu-miR-1388 MIMAT0035015 Eptesicus fuscus miR-1388                    12      80
efu-miR-452 MIMAT0034893 Eptesicus fuscus miR-452                      12      80
efu-miR-9189f MIMAT0034887 Eptesicus fuscus miR-9189f                  12      80
efu-miR-9237c MIMAT0034840 Eptesicus fuscus miR-9237c                  12      80
eca-miR-8908a MIMAT0034713 Equus caballus miR-8908a                    12      80
eca-miR-9120 MIMAT0034669 Equus caballus miR-9120                      12      80
cfa-miR-8890 MIMAT0034397 Canis familiaris miR-8890                    12      80
pxy-miR-8529 MIMAT0033771 Plutella xylostella miR-8529                 12      80
pxy-miR-8511 MIMAT0033739 Plutella xylostella miR-8511                 12      80
sma-miR-8417-5p MIMAT0033538 Schistosoma mansoni miR-8417-5p           12      80
ppc-miR-8266-5p MIMAT0033016 Pristionchus pacificus miR-8266-5p        12      80
ssa-miR-727-5p MIMAT0032675 Salmo salar miR-727-5p                     12      80
ssa-miR-29b-1-5p MIMAT0032585 Salmo salar miR-29b-1-5p                 12      80
ssa-miR-181c-3p MIMAT0032426 Salmo salar miR-181c-3p                   12      80
cpa-miR8147 MIMAT0031844 Carica papaya miR8147                         12      80
prd-miR-5594-5p MIMAT0030764 Panagrellus redivivus miR-5594-5p         12      80
prd-miR-7927e-3p MIMAT0030703 Panagrellus redivivus miR-7927e-3p       12      80
prd-miR-7927b-3p MIMAT0030645 Panagrellus redivivus miR-7927b-3p       12      80
prd-miR-7927d-3p MIMAT0030613 Panagrellus redivivus miR-7927d-3p       12      80
prd-miR-7927c-3p MIMAT0030611 Panagrellus redivivus miR-7927c-3p       12      80
prd-miR-7927a-3p MIMAT0030547 Panagrellus redivivus miR-7927a-3p       12      80
mmu-miR-3569-3p MIMAT0029855 Mus musculus miR-3569-3p                  12      80
tgu-miR-7643-5p MIMAT0029786 Taeniopygia guttata miR-7643-5p           12      80
ipu-miR-29a MIMAT0029537 Ictalurus punctatus miR-29a                   12      80
oan-miR-181b-2-3p MIMAT0031055 Ornithorhynchus anatinus miR-181b...    12      80
mdo-miR-30d-3p MIMAT0028623 Monodelphis domestica miR-30d-3p           12      80
mdo-miR-181b-2-3p MIMAT0031046 Monodelphis domestica miR-181b-2-3p     12      80
ccr-miR-727-5p MIMAT0026314 Cyprinus carpio miR-727-5p                 12      80
blv-miR-B2-5p MIMAT0025860 Bovine leukemia miR-B2-5p                   12      80
gga-miR-6562-3p MIMAT0025833 Gallus gallus miR-6562-3p                 12      80
hme-miR-14 MIMAT0024942 Heliconius melpomene miR-14                    12      80
mse-miR-2766 MIMAT0024482 Manduca sexta miR-2766                       12      80
mse-miR-14 MIMAT0024463 Manduca sexta miR-14                           12      80
ptr-miR-3136 MIMAT0024064 Pan troglodytes miR-3136                     12      80
cgr-miR-29a-5p MIMAT0023883 Cricetulus griseus miR-29a-5p              12      80
tur-miR-34-3p MIMAT0023097 Tetranychus urticae miR-34-3p               12      80
aca-miR-727-5p MIMAT0021987 Anolis carolinensis miR-727-5p             12      80
aca-miR-30d-3p MIMAT0021927 Anolis carolinensis miR-30d-3p             12      80
mtr-miR5225a MIMAT0021183 Medicago truncatula miR5225a                 12      80
gma-miR319d MIMAT0020992 Glycine max miR319d                           12      80
hsa-miR-4740-5p MIMAT0019869 Homo sapiens miR-4740-5p                  12      80
hsa-miR-4704-3p MIMAT0019804 Homo sapiens miR-4704-3p                  12      80
pma-miR-30c-3p MIMAT0019426 Petromyzon marinus miR-30c-3p              12      80
pma-miR-29a-5p MIMAT0019416 Petromyzon marinus miR-29a-5p              12      80
hsa-miR-4499 MIMAT0019035 Homo sapiens miR-4499                        12      80
hsa-miR-4439 MIMAT0018957 Homo sapiens miR-4439                        12      80
ngi-miR-14 MIMAT0018389 Nasonia giraulti miR-14                        12      80
hsa-miR-3920 MIMAT0018195 Homo sapiens miR-3920                        12      80
tca-miR-3869-5p MIMAT0018830 Tribolium castaneum miR-3869-5p           12      80
ame-miR-3792 MIMAT0018575 Apis mellifera miR-3792                      12      80
hsa-miR-4264 MIMAT0016899 Homo sapiens miR-4264                        12      80
cin-miR-4056-5p MIMAT0016601 Ciona intestinalis miR-4056-5p            12      80
nvi-miR-14 MIMAT0015655 Nasonia vitripennis miR-14                     12      80
bta-miR-3431 MIMAT0017394 Bos taurus miR-3431                          12      80
bmo-miR-3267c MIMAT0015556 Bombyx mori miR-3267c