BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prv-miR-11-1
         (8 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

oha-miR-456 MIMAT0036933 Ophiophagus hannah miR-456                    14      27
chi-miR-873-3p MIMAT0036295 Capra hircus miR-873-3p                    14      27
chi-miR-485-5p MIMAT0036244 Capra hircus miR-485-5p                    14      27
eca-miR-8943 MIMAT0034472 Equus caballus miR-8943                      14      27
ssa-miR-92a-3-5p MIMAT0032709 Salmo salar miR-92a-3-5p                 14      27
ssa-miR-456-3p MIMAT0032646 Salmo salar miR-456-3p                     14      27
bdi-miR7766-3p MIMAT0030281 Brachypodium distachyon miR7766-3p         14      27
pmi-miR-2008-3p MIMAT0032182 Patiria miniata miR-2008-3p               14      27
mmu-miR-7679-5p MIMAT0029872 Mus musculus miR-7679-5p                  14      27
ipu-miR-456 MIMAT0029514 Ictalurus punctatus miR-456                   14      27
oan-miR-7408-5p MIMAT0028962 Ornithorhynchus anatinus miR-7408-5p      14      27
mmu-miR-6971-3p MIMAT0027845 Mus musculus miR-6971-3p                  14      27
mmu-miR-6947-3p MIMAT0027795 Mus musculus miR-6947-3p                  14      27
hsa-miR-6884-5p MIMAT0027668 Homo sapiens miR-6884-5p                  14      27
hsa-miR-6877-3p MIMAT0027655 Homo sapiens miR-6877-3p                  14      27
hsa-miR-6849-3p MIMAT0027599 Homo sapiens miR-6849-3p                  14      27
gga-miR-6618-5p MIMAT0025714 Gallus gallus miR-6618-5p                 14      27
prv-miR-LLT11b MIMAT0025316 Pseudorabies virus miR-LLT11b              14      27
prv-miR-LLT11a MIMAT0025315 Pseudorabies virus miR-LLT11a              14      27
rno-miR-6333 MIMAT0025074 Rattus norvegicus miR-6333                   14      27
ggo-miR-485 MIMAT0024102 Gorilla gorilla miR-485                       14      27
cgr-miR-92a-5p MIMAT0024009 Cricetulus griseus miR-92a-5p              14      27
hco-miR-5911c MIMAT0023397 Haemonchus contortus miR-5911c              14      27
aca-miR-456 MIMAT0021966 Anolis carolinensis miR-456                   14      27
mtr-miR2592bg MIMAT0021204 Medicago truncatula miR2592bg               14      27
mtr-miR2592bf MIMAT0021203 Medicago truncatula miR2592bf               14      27
mtr-miR2592be MIMAT0021202 Medicago truncatula miR2592be               14      27
mtr-miR2592bd MIMAT0021201 Medicago truncatula miR2592bd               14      27
mtr-miR2592bc MIMAT0021200 Medicago truncatula miR2592bc               14      27
mtr-miR2592bb MIMAT0021199 Medicago truncatula miR2592bb               14      27
mtr-miR2592ba MIMAT0021198 Medicago truncatula miR2592ba               14      27
mtr-miR2592az MIMAT0021197 Medicago truncatula miR2592az               14      27
mtr-miR2592ay MIMAT0021196 Medicago truncatula miR2592ay               14      27
mtr-miR2592ax MIMAT0021195 Medicago truncatula miR2592ax               14      27
mtr-miR2592aw MIMAT0021194 Medicago truncatula miR2592aw               14      27
mtr-miR2592av MIMAT0021193 Medicago truncatula miR2592av               14      27
mtr-miR2592au MIMAT0021192 Medicago truncatula miR2592au               14      27
mtr-miR2592at MIMAT0021191 Medicago truncatula miR2592at               14      27
mtr-miR2592as MIMAT0021190 Medicago truncatula miR2592as               14      27
mtr-miR2592ar MIMAT0021189 Medicago truncatula miR2592ar               14      27
mtr-miR2592aq MIMAT0021188 Medicago truncatula miR2592aq               14      27
mtr-miR2592ap MIMAT0021187 Medicago truncatula miR2592ap               14      27
pma-miR-456 MIMAT0019554 Petromyzon marinus miR-456                    14      27
oar-miR-485-5p MIMAT0019312 Ovis aries miR-485-5p                      14      27
hsa-miR-4505 MIMAT0019041 Homo sapiens miR-4505                        14      27
hsa-miR-4419b MIMAT0019034 Homo sapiens miR-4419b                      14      27
hsa-miR-4478 MIMAT0019006 Homo sapiens miR-4478                        14      27
hsa-miR-4430 MIMAT0018945 Homo sapiens miR-4430                        14      27
hsa-miR-3929 MIMAT0018206 Homo sapiens miR-3929                        14      27
ppy-miR-485-5p MIMAT0015902 Pongo pygmaeus miR-485-5p                  14      27
mmu-miR-3083-5p MIMAT0014874 Mus musculus miR-3083-5p                  14      27
tgu-miR-456-3p MIMAT0014469 Taeniopygia guttata miR-456-3p             14      27
eca-miR-485-5p MIMAT0013159 Equus caballus miR-485-5p                  14      27
bta-miR-664a MIMAT0012078 Bos taurus miR-664a                          14      27
bta-miR-2294 MIMAT0011802 Bos taurus miR-2294                          14      27
mmu-miR-1962 MIMAT0009435 Mus musculus miR-1962                        14      27
bta-miR-940 MIMAT0009386 Bos taurus miR-940                            14      27
bta-miR-485 MIMAT0009328 Bos taurus miR-485                            14      27
cfa-miR-485 MIMAT0006725 Canis familiaris miR-485                      14      27
mml-miR-485-5p MIMAT0006342 Macaca mulatta miR-485-5p                  14      27
gga-miR-1703-5p MIMAT0007595 Gallus gallus miR-1703-5p                 14      27
gga-miR-1698 MIMAT0007590 Gallus gallus miR-1698                       14      27
gga-miR-1589 MIMAT0007451 Gallus gallus miR-1589                       14      27
gga-miR-456-3p MIMAT0003777 Gallus gallus miR-456-3p                   14      27
mmu-miR-681 MIMAT0003458 Mus musculus miR-681                          14      27
rno-miR-485-5p MIMAT0003203 Rattus norvegicus miR-485-5p               14      27
mmu-miR-485-5p MIMAT0003128 Mus musculus miR-485-5p                    14      27
hsa-miR-485-5p MIMAT0002175 Homo sapiens miR-485-5p                    14      27
dre-miR-456 MIMAT0001882 Danio rerio miR-456                           14      27
>oha-miR-456 MIMAT0036933 Ophiophagus hannah miR-456
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>chi-miR-873-3p MIMAT0036295 Capra hircus miR-873-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 1 gaggctg 7
>chi-miR-485-5p MIMAT0036244 Capra hircus miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>eca-miR-8943 MIMAT0034472 Equus caballus miR-8943
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>ssa-miR-92a-3-5p MIMAT0032709 Salmo salar miR-92a-3-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>ssa-miR-456-3p MIMAT0032646 Salmo salar miR-456-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>bdi-miR7766-3p MIMAT0030281 Brachypodium distachyon miR7766-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>pmi-miR-2008-3p MIMAT0032182 Patiria miniata miR-2008-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 8 gaggctg 2
>mmu-miR-7679-5p MIMAT0029872 Mus musculus miR-7679-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>ipu-miR-456 MIMAT0029514 Ictalurus punctatus miR-456
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>oan-miR-7408-5p MIMAT0028962 Ornithorhynchus anatinus
         miR-7408-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 1 gaggctg 7
>mmu-miR-6971-3p MIMAT0027845 Mus musculus miR-6971-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 8 gaggctg 2
>mmu-miR-6947-3p MIMAT0027795 Mus musculus miR-6947-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 8 gaggctg 2
>hsa-miR-6884-5p MIMAT0027668 Homo sapiens miR-6884-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>hsa-miR-6877-3p MIMAT0027655 Homo sapiens miR-6877-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 7 gaggctg 1
>hsa-miR-6849-3p MIMAT0027599 Homo sapiens miR-6849-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 8 aggctgg 2
>gga-miR-6618-5p MIMAT0025714 Gallus gallus miR-6618-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>prv-miR-LLT11b MIMAT0025316 Pseudorabies virus miR-LLT11b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>prv-miR-LLT11a MIMAT0025315 Pseudorabies virus miR-LLT11a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>rno-miR-6333 MIMAT0025074 Rattus norvegicus miR-6333
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>ggo-miR-485 MIMAT0024102 Gorilla gorilla miR-485
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>cgr-miR-92a-5p MIMAT0024009 Cricetulus griseus miR-92a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>hco-miR-5911c MIMAT0023397 Haemonchus contortus miR-5911c
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>aca-miR-456 MIMAT0021966 Anolis carolinensis miR-456
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>mtr-miR2592bg MIMAT0021204 Medicago truncatula miR2592bg
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592bf MIMAT0021203 Medicago truncatula miR2592bf
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592be MIMAT0021202 Medicago truncatula miR2592be
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592bd MIMAT0021201 Medicago truncatula miR2592bd
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592bc MIMAT0021200 Medicago truncatula miR2592bc
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592bb MIMAT0021199 Medicago truncatula miR2592bb
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592ba MIMAT0021198 Medicago truncatula miR2592ba
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592az MIMAT0021197 Medicago truncatula miR2592az
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592ay MIMAT0021196 Medicago truncatula miR2592ay
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592ax MIMAT0021195 Medicago truncatula miR2592ax
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592aw MIMAT0021194 Medicago truncatula miR2592aw
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592av MIMAT0021193 Medicago truncatula miR2592av
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592au MIMAT0021192 Medicago truncatula miR2592au
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592at MIMAT0021191 Medicago truncatula miR2592at
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592as MIMAT0021190 Medicago truncatula miR2592as
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592ar MIMAT0021189 Medicago truncatula miR2592ar
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592aq MIMAT0021188 Medicago truncatula miR2592aq
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>mtr-miR2592ap MIMAT0021187 Medicago truncatula miR2592ap
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>pma-miR-456 MIMAT0019554 Petromyzon marinus miR-456
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>oar-miR-485-5p MIMAT0019312 Ovis aries miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>hsa-miR-4505 MIMAT0019041 Homo sapiens miR-4505
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>hsa-miR-4419b MIMAT0019034 Homo sapiens miR-4419b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 1 gaggctg 7
>hsa-miR-4478 MIMAT0019006 Homo sapiens miR-4478
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 1 gaggctg 7
>hsa-miR-4430 MIMAT0018945 Homo sapiens miR-4430
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>hsa-miR-3929 MIMAT0018206 Homo sapiens miR-3929
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 1 gaggctg 7
>ppy-miR-485-5p MIMAT0015902 Pongo pygmaeus miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>mmu-miR-3083-5p MIMAT0014874 Mus musculus miR-3083-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 1 aggctgg 7
>tgu-miR-456-3p MIMAT0014469 Taeniopygia guttata miR-456-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>eca-miR-485-5p MIMAT0013159 Equus caballus miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>bta-miR-664a MIMAT0012078 Bos taurus miR-664a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>bta-miR-2294 MIMAT0011802 Bos taurus miR-2294
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 1 gaggctg 7
>mmu-miR-1962 MIMAT0009435 Mus musculus miR-1962
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>bta-miR-940 MIMAT0009386 Bos taurus miR-940
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>bta-miR-485 MIMAT0009328 Bos taurus miR-485
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>cfa-miR-485 MIMAT0006725 Canis familiaris miR-485
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>mml-miR-485-5p MIMAT0006342 Macaca mulatta miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>gga-miR-1703-5p MIMAT0007595 Gallus gallus miR-1703-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>gga-miR-1698 MIMAT0007590 Gallus gallus miR-1698
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>gga-miR-1589 MIMAT0007451 Gallus gallus miR-1589
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 7 gaggctg 1
>gga-miR-456-3p MIMAT0003777 Gallus gallus miR-456-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
>mmu-miR-681 MIMAT0003458 Mus musculus miR-681
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 7 gaggctg 1
>rno-miR-485-5p MIMAT0003203 Rattus norvegicus miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>mmu-miR-485-5p MIMAT0003128 Mus musculus miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>hsa-miR-485-5p MIMAT0002175 Homo sapiens miR-485-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gaggctg 7
         |||||||
Sbjct: 2 gaggctg 8
>dre-miR-456 MIMAT0001882 Danio rerio miR-456
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aggctgg 8
         |||||||
Sbjct: 2 aggctgg 8
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 266
Number of extensions: 197
Number of successful extensions: 150
Number of sequences better than 100.0: 69
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 69
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space:   573248
Effective search space used:   573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)