BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mdv1-miR-m2-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-455-3p MIMAT0036932 Ophiophagus hannah miR-455-3p 14 20
tch-miR-455-3p MIMAT0036608 Tupaia chinensis miR-455-3p 14 20
chi-miR-455-3p MIMAT0036242 Capra hircus miR-455-3p 14 20
ssa-miR-455-3p MIMAT0032644 Salmo salar miR-455-3p 14 20
mml-miR-7170-5p MIMAT0028274 Macaca mulatta miR-7170-5p 14 20
ggo-miR-455 MIMAT0024222 Gorilla gorilla miR-455 14 20
cgr-miR-455-3p MIMAT0023965 Cricetulus griseus miR-455-3p 14 20
ola-miR-455-3p MIMAT0022608 Oryzias latipes miR-455-3p 14 20
aca-miR-455-3p MIMAT0021965 Anolis carolinensis miR-455-3p 14 20
ppy-miR-455-3p MIMAT0015900 Pongo pygmaeus miR-455-3p 14 20
tgu-miR-455-3p MIMAT0014610 Taeniopygia guttata miR-455-3p 14 20
ssc-miR-455-3p MIMAT0013960 Sus scrofa miR-455-3p 14 20
ptr-miR-455 MIMAT0008157 Pan troglodytes miR-455 14 20
ptr-miR-1288 MIMAT0008006 Pan troglodytes miR-1288 14 20
mml-miR-455-3p MIMAT0006340 Macaca mulatta miR-455-3p 14 20
hsa-miR-1288-3p MIMAT0005942 Homo sapiens miR-1288-3p 14 20
rno-miR-455-3p MIMAT0017308 Rattus norvegicus miR-455-3p 14 20
mdv1-miR-M2-3p MIMAT0003922 Mareks disease miR-M2-3p 14 20
bta-miR-455-3p MIMAT0003836 Bos taurus miR-455-3p 14 20
mmu-miR-455-3p MIMAT0003742 Mus musculus miR-455-3p 14 20
gga-miR-455-3p MIMAT0006788 Gallus gallus miR-455-3p 14 20
hsa-miR-455-3p MIMAT0004784 Homo sapiens miR-455-3p 14 20
bra-miR319-3p MIMAT0035839 Brassica rapa miR319-3p 12 80
tae-miR9664-3p MIMAT0035775 Triticum aestivum miR9664-3p 12 80
sly-miR9479-5p MIMAT0035477 Solanum lycopersicum miR9479-5p 12 80
sly-miR319c-3p MIMAT0035432 Solanum lycopersicum miR319c-3p 12 80
sly-miR319b MIMAT0035430 Solanum lycopersicum miR319b 12 80
efu-miR-455 MIMAT0035085 Eptesicus fuscus miR-455 12 80
efu-miR-9231 MIMAT0034836 Eptesicus fuscus miR-9231 12 80
eca-miR-9065 MIMAT0034610 Equus caballus miR-9065 12 80
gra-miR8772 MIMAT0034210 Gossypium raimondii miR8772 12 80
gra-miR3476 MIMAT0033982 Gossypium raimondii miR3476 12 80
atr-miR319c MIMAT0033930 Amborella trichopoda miR319c 12 80
atr-miR319a MIMAT0033928 Amborella trichopoda miR319a 12 80
cpa-miR8152 MIMAT0031849 Carica papaya miR8152 12 80
stu-miR169c-3p MIMAT0031364 Solanum tuberosum miR169c-3p 12 80
stu-miR169b-3p MIMAT0031362 Solanum tuberosum miR169b-3p 12 80
stu-miR169a-3p MIMAT0031360 Solanum tuberosum miR169a-3p 12 80
stu-miR319a-3p MIMAT0031278 Solanum tuberosum miR319a-3p 12 80
stu-miR319b MIMAT0031276 Solanum tuberosum miR319b 12 80
hsa-miR-8052 MIMAT0030979 Homo sapiens miR-8052 12 80
stu-miR319-3p MIMAT0030952 Solanum tuberosum miR319-3p 12 80
bta-miR-7863 MIMAT0030445 Bos taurus miR-7863 12 80
mtr-miR319d-3p MIMAT0029983 Medicago truncatula miR319d-3p 12 80
mtr-miR319c-3p MIMAT0029981 Medicago truncatula miR319c-3p 12 80
mmu-miR-7667-3p MIMAT0029841 Mus musculus miR-7667-3p 12 80
mes-miR319g MIMAT0029259 Manihot esculenta miR319g 12 80
mes-miR319f MIMAT0029258 Manihot esculenta miR319f 12 80
mes-miR319e MIMAT0029257 Manihot esculenta miR319e 12 80
mes-miR319d MIMAT0029256 Manihot esculenta miR319d 12 80
mes-miR319c MIMAT0029255 Manihot esculenta miR319c 12 80
mes-miR319b MIMAT0029254 Manihot esculenta miR319b 12 80
mes-miR319a MIMAT0029253 Manihot esculenta miR319a 12 80
mmu-miR-7214-3p MIMAT0028397 Mus musculus miR-7214-3p 12 80
dev-miR-D9-3p MIMAT0028181 Duck enteritis miR-D9-3p 12 80
ssc-miR-7138-3p MIMAT0028152 Sus scrofa miR-7138-3p 12 80
cme-miR319d MIMAT0026132 Cucumis melo miR319d 12 80
cme-miR319c MIMAT0026130 Cucumis melo miR319c 12 80
cme-miR319a MIMAT0026129 Cucumis melo miR319a 12 80
cme-miR319b MIMAT0026128 Cucumis melo miR319b 12 80
mdm-miR319b MIMAT0025968 Malus domestica miR319b 12 80
mdm-miR319a MIMAT0025967 Malus domestica miR319a 12 80
hbr-miR319 MIMAT0025286 Hevea brasiliensis miR319 12 80
ppe-miR319a MIMAT0027300 Prunus persica miR319a 12 80
nta-miR319b MIMAT0024700 Nicotiana tabacum miR319b 12 80
nta-miR319a MIMAT0024699 Nicotiana tabacum miR319a 12 80
lus-miR319b MIMAT0027130 Linum usitatissimum miR319b 12 80
lus-miR319a MIMAT0027123 Linum usitatissimum miR319a 12 80
cca-miR319 MIMAT0024522 Cynara cardunculus miR319 12 80
tca-miR-6008-5p MIMAT0023557 Tribolium castaneum miR-6008-5p 12 80
hhv6b-miR-Ro6-1-5p MIMAT0023510 Human herpesvirus miR-Ro6-1-5p 12 80
osa-miR5802 MIMAT0023271 Oryza sativa miR5802 12 80
vun-miR319a MIMAT0022761 Vigna unguiculata miR319a 12 80
amg-miR319 MIMAT0022679 Acacia mangium miR319 12 80
aau-miR319 MIMAT0022675 Acacia auriculiformis miR319 12 80
gma-miR319m MIMAT0021667 Glycine max miR319m 12 80
gma-miR319l MIMAT0021666 Glycine max miR319l 12 80
gma-miR319k MIMAT0021665 Glycine max miR319k 12 80
gma-miR319j MIMAT0021664 Glycine max miR319j 12 80
gma-miR319i MIMAT0021663 Glycine max miR319i 12 80
gma-miR319h MIMAT0021662 Glycine max miR319h 12 80
gma-miR319g MIMAT0021661 Glycine max miR319g 12 80
bdi-miR319b-3p MIMAT0020761 Brachypodium distachyon miR319b-3p 12 80
gma-miR319f MIMAT0020994 Glycine max miR319f 12 80
gma-miR319e MIMAT0020993 Glycine max miR319e 12 80
hsa-miR-1269b MIMAT0019059 Homo sapiens miR-1269b 12 80
gma-miR4356 MIMAT0018248 Glycine max miR4356 12 80
tae-miR319 MIMAT0018211 Triticum aestivum miR319 12 80
hsa-miR-4274 MIMAT0016906 Homo sapiens miR-4274 12 80
ppy-miR-1269 MIMAT0016193 Pongo pygmaeus miR-1269 12 80
aly-miR319d-3p MIMAT0017664 Arabidopsis lyrata miR319d-3p 12 80
aly-miR166b-5p MIMAT0017461 Arabidopsis lyrata miR166b-5p 12 80
aly-miR319c-3p MIMAT0017434 Arabidopsis lyrata miR319c-3p 12 80
aly-miR319b-3p MIMAT0017432 Arabidopsis lyrata miR319b-3p 12 80
aly-miR319a-3p MIMAT0017430 Arabidopsis lyrata miR319a-3p 12 80
hsa-miR-3199 MIMAT0015084 Homo sapiens miR-3199 12 80
hsa-miR-3169 MIMAT0015044 Homo sapiens miR-3169 12 80
tgu-miR-2965 MIMAT0014468 Taeniopygia guttata miR-2965 12 80
rco-miR319d MIMAT0014183 Ricinus communis miR319d 12 80
rco-miR319c MIMAT0014182 Ricinus communis miR319c 12 80
rco-miR319b MIMAT0014181 Ricinus communis miR319b 12 80
rco-miR319a MIMAT0014180 Ricinus communis miR319a 12 80
ctr-miR319 MIMAT0014077 Citrus trifoliata miR319 12 80
mdo-miR-455-3p MIMAT0026942 Monodelphis domestica miR-455-3p 12 80
aqc-miR319 MIMAT0012573 Aquilegia caerulea miR319 12 80
sbi-miR319b MIMAT0011346 Sorghum bicolor miR319b 12 80
pvu-miR319c MIMAT0011176 Phaseolus vulgaris miR319c 12 80
mtr-miR2087-3p MIMAT0010037 Medicago truncatula miR2087-3p 12 80
mml-miR-625 MIMAT0006471 Macaca mulatta miR-625 12 80
gga-miR-1567 MIMAT0007427 Gallus gallus miR-1567 12 80
oan-miR-1362-3p MIMAT0007024 Ornithorhynchus anatinus miR-1362-3p 12 80
vvi-miR319g MIMAT0005706 Vitis vinifera miR319g 12 80
vvi-miR319f MIMAT0005705 Vitis vinifera miR319f 12 80
vvi-miR319c MIMAT0005704 Vitis vinifera miR319c 12 80
vvi-miR319b MIMAT0005703 Vitis vinifera miR319b 12 80
hsa-miR-1269a MIMAT0005923 Homo sapiens miR-1269a 12 80
pta-miR319 MIMAT0004997 Pinus taeda miR319 12 80
mtr-miR319b-3p MIMAT0011082 Medicago truncatula miR319b-3p 12 80
mmu-miR-682 MIMAT0003459 Mus musculus miR-682 12 80
mmu-miR-679-5p MIMAT0003455 Mus musculus miR-679-5p 12 80
ssc-miR-301 MIMAT0002138 Sus scrofa miR-301 12 80
ptc-miR319h MIMAT0002009 Populus trichocarpa miR319h 12 80
ptc-miR319g MIMAT0002008 Populus trichocarpa miR319g 12 80
ptc-miR319f MIMAT0002007 Populus trichocarpa miR319f 12 80
ptc-miR319e MIMAT0002006 Populus trichocarpa miR319e 12 80
ptc-miR319d MIMAT0002005 Populus trichocarpa miR319d 12 80
ptc-miR319c MIMAT0002004 Populus trichocarpa miR319c 12 80
ptc-miR319b MIMAT0002003 Populus trichocarpa miR319b 12 80
ptc-miR319a MIMAT0002002 Populus trichocarpa miR319a 12 80
dre-miR-455-3p MIMAT0031993 Danio rerio miR-455-3p 12 80
zma-miR319d-3p MIMAT0001718 Zea mays miR319d-3p 12 80
zma-miR319b-3p MIMAT0001717 Zea mays miR319b-3p 12 80
zma-miR319c-3p MIMAT0001716 Zea mays miR319c-3p 12 80
zma-miR319a-3p MIMAT0001715 Zea mays miR319a-3p 12 80
gma-miR319c MIMAT0001691 Glycine max miR319c 12 80
gma-miR319b MIMAT0001685 Glycine max miR319b 12 80
gma-miR319a MIMAT0001684 Glycine max miR319a 12 80
mtr-miR319a-3p MIMAT0001653 Medicago truncatula miR319a-3p 12 80
sbi-miR319a MIMAT0001469 Sorghum bicolor miR319a 12 80
osa-miR319b MIMAT0001029 Oryza sativa miR319b 12 80
osa-miR319a-3p.2-3p MIMAT0001028 Oryza sativa miR319a-3p.2-3p 12 80
ath-miR319c MIMAT0001016 Arabidopsis thaliana miR319c 12 80
ath-miR319b MIMAT0000512 Arabidopsis thaliana miR319b 12 80
ath-miR319a MIMAT0000511 Arabidopsis thaliana miR319a 12 80
ath-miR166b-5p MIMAT0031881 Arabidopsis thaliana miR166b-5p 12 80
ath-miR166a-5p MIMAT0031880 Arabidopsis thaliana miR166a-5p 12 80
>oha-miR-455-3p MIMAT0036932 Ophiophagus hannah miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>tch-miR-455-3p MIMAT0036608 Tupaia chinensis miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>chi-miR-455-3p MIMAT0036242 Capra hircus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>ssa-miR-455-3p MIMAT0032644 Salmo salar miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>mml-miR-7170-5p MIMAT0028274 Macaca mulatta miR-7170-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ggactgc 7
|||||||
Sbjct: 2 ggactgc 8
>ggo-miR-455 MIMAT0024222 Gorilla gorilla miR-455
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>cgr-miR-455-3p MIMAT0023965 Cricetulus griseus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>ola-miR-455-3p MIMAT0022608 Oryzias latipes miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 8 ggactgc 2
>aca-miR-455-3p MIMAT0021965 Anolis carolinensis miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>ppy-miR-455-3p MIMAT0015900 Pongo pygmaeus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>tgu-miR-455-3p MIMAT0014610 Taeniopygia guttata miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 8 ggactgc 2
>ssc-miR-455-3p MIMAT0013960 Sus scrofa miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>ptr-miR-455 MIMAT0008157 Pan troglodytes miR-455
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>ptr-miR-1288 MIMAT0008006 Pan troglodytes miR-1288
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ggactgc 7
|||||||
Sbjct: 2 ggactgc 8
>mml-miR-455-3p MIMAT0006340 Macaca mulatta miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>hsa-miR-1288-3p MIMAT0005942 Homo sapiens miR-1288-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ggactgc 7
|||||||
Sbjct: 2 ggactgc 8
>rno-miR-455-3p MIMAT0017308 Rattus norvegicus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>mdv1-miR-M2-3p MIMAT0003922 Mareks disease miR-M2-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ggactgc 7
|||||||
Sbjct: 2 ggactgc 8
>bta-miR-455-3p MIMAT0003836 Bos taurus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>mmu-miR-455-3p MIMAT0003742 Mus musculus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>gga-miR-455-3p MIMAT0006788 Gallus gallus miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 8 ggactgc 2
>hsa-miR-455-3p MIMAT0004784 Homo sapiens miR-455-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ggactgc 7
|||||||
Sbjct: 7 ggactgc 1
>bra-miR319-3p MIMAT0035839 Brassica rapa miR319-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>tae-miR9664-3p MIMAT0035775 Triticum aestivum miR9664-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>sly-miR9479-5p MIMAT0035477 Solanum lycopersicum miR9479-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ggactg 6
||||||
Sbjct: 8 ggactg 3
>sly-miR319c-3p MIMAT0035432 Solanum lycopersicum miR319c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>sly-miR319b MIMAT0035430 Solanum lycopersicum miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>efu-miR-455 MIMAT0035085 Eptesicus fuscus miR-455
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>efu-miR-9231 MIMAT0034836 Eptesicus fuscus miR-9231
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 6 gactgc 1
>eca-miR-9065 MIMAT0034610 Equus caballus miR-9065
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gra-miR8772 MIMAT0034210 Gossypium raimondii miR8772
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gra-miR3476 MIMAT0033982 Gossypium raimondii miR3476
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>atr-miR319c MIMAT0033930 Amborella trichopoda miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>atr-miR319a MIMAT0033928 Amborella trichopoda miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>cpa-miR8152 MIMAT0031849 Carica papaya miR8152
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>stu-miR169c-3p MIMAT0031364 Solanum tuberosum miR169c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 6 gactgc 1
>stu-miR169b-3p MIMAT0031362 Solanum tuberosum miR169b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 6 gactgc 1
>stu-miR169a-3p MIMAT0031360 Solanum tuberosum miR169a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 6 gactgc 1
>stu-miR319a-3p MIMAT0031278 Solanum tuberosum miR319a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>stu-miR319b MIMAT0031276 Solanum tuberosum miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hsa-miR-8052 MIMAT0030979 Homo sapiens miR-8052
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>stu-miR319-3p MIMAT0030952 Solanum tuberosum miR319-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>bta-miR-7863 MIMAT0030445 Bos taurus miR-7863
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mtr-miR319d-3p MIMAT0029983 Medicago truncatula miR319d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mtr-miR319c-3p MIMAT0029981 Medicago truncatula miR319c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mmu-miR-7667-3p MIMAT0029841 Mus musculus miR-7667-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319g MIMAT0029259 Manihot esculenta miR319g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319f MIMAT0029258 Manihot esculenta miR319f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319e MIMAT0029257 Manihot esculenta miR319e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319d MIMAT0029256 Manihot esculenta miR319d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319c MIMAT0029255 Manihot esculenta miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319b MIMAT0029254 Manihot esculenta miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mes-miR319a MIMAT0029253 Manihot esculenta miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mmu-miR-7214-3p MIMAT0028397 Mus musculus miR-7214-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ggactg 6
||||||
Sbjct: 8 ggactg 3
>dev-miR-D9-3p MIMAT0028181 Duck enteritis miR-D9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ggactg 6
||||||
Sbjct: 6 ggactg 1
>ssc-miR-7138-3p MIMAT0028152 Sus scrofa miR-7138-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>cme-miR319d MIMAT0026132 Cucumis melo miR319d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>cme-miR319c MIMAT0026130 Cucumis melo miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>cme-miR319a MIMAT0026129 Cucumis melo miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>cme-miR319b MIMAT0026128 Cucumis melo miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mdm-miR319b MIMAT0025968 Malus domestica miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mdm-miR319a MIMAT0025967 Malus domestica miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hbr-miR319 MIMAT0025286 Hevea brasiliensis miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ppe-miR319a MIMAT0027300 Prunus persica miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>nta-miR319b MIMAT0024700 Nicotiana tabacum miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>nta-miR319a MIMAT0024699 Nicotiana tabacum miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>lus-miR319b MIMAT0027130 Linum usitatissimum miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>lus-miR319a MIMAT0027123 Linum usitatissimum miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>cca-miR319 MIMAT0024522 Cynara cardunculus miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>tca-miR-6008-5p MIMAT0023557 Tribolium castaneum miR-6008-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gactgc 7
||||||
Sbjct: 1 gactgc 6
>hhv6b-miR-Ro6-1-5p MIMAT0023510 Human herpesvirus miR-Ro6-1-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>osa-miR5802 MIMAT0023271 Oryza sativa miR5802
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>vun-miR319a MIMAT0022761 Vigna unguiculata miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>amg-miR319 MIMAT0022679 Acacia mangium miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>aau-miR319 MIMAT0022675 Acacia auriculiformis miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319m MIMAT0021667 Glycine max miR319m
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319l MIMAT0021666 Glycine max miR319l
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319k MIMAT0021665 Glycine max miR319k
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319j MIMAT0021664 Glycine max miR319j
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319i MIMAT0021663 Glycine max miR319i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319h MIMAT0021662 Glycine max miR319h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319g MIMAT0021661 Glycine max miR319g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>bdi-miR319b-3p MIMAT0020761 Brachypodium distachyon miR319b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319f MIMAT0020994 Glycine max miR319f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319e MIMAT0020993 Glycine max miR319e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hsa-miR-1269b MIMAT0019059 Homo sapiens miR-1269b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR4356 MIMAT0018248 Glycine max miR4356
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>tae-miR319 MIMAT0018211 Triticum aestivum miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hsa-miR-4274 MIMAT0016906 Homo sapiens miR-4274
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>ppy-miR-1269 MIMAT0016193 Pongo pygmaeus miR-1269
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>aly-miR319d-3p MIMAT0017664 Arabidopsis lyrata miR319d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>aly-miR166b-5p MIMAT0017461 Arabidopsis lyrata miR166b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 1 ggactg 6
>aly-miR319c-3p MIMAT0017434 Arabidopsis lyrata miR319c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>aly-miR319b-3p MIMAT0017432 Arabidopsis lyrata miR319b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>aly-miR319a-3p MIMAT0017430 Arabidopsis lyrata miR319a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hsa-miR-3199 MIMAT0015084 Homo sapiens miR-3199
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hsa-miR-3169 MIMAT0015044 Homo sapiens miR-3169
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>tgu-miR-2965 MIMAT0014468 Taeniopygia guttata miR-2965
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>rco-miR319d MIMAT0014183 Ricinus communis miR319d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>rco-miR319c MIMAT0014182 Ricinus communis miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>rco-miR319b MIMAT0014181 Ricinus communis miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>rco-miR319a MIMAT0014180 Ricinus communis miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ctr-miR319 MIMAT0014077 Citrus trifoliata miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mdo-miR-455-3p MIMAT0026942 Monodelphis domestica miR-455-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>aqc-miR319 MIMAT0012573 Aquilegia caerulea miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>sbi-miR319b MIMAT0011346 Sorghum bicolor miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>pvu-miR319c MIMAT0011176 Phaseolus vulgaris miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mtr-miR2087-3p MIMAT0010037 Medicago truncatula miR2087-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>mml-miR-625 MIMAT0006471 Macaca mulatta miR-625
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 1 ggactg 6
>gga-miR-1567 MIMAT0007427 Gallus gallus miR-1567
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 gactgc 7
||||||
Sbjct: 1 gactgc 6
>oan-miR-1362-3p MIMAT0007024 Ornithorhynchus anatinus
miR-1362-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ggactg 6
||||||
Sbjct: 6 ggactg 1
>vvi-miR319g MIMAT0005706 Vitis vinifera miR319g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>vvi-miR319f MIMAT0005705 Vitis vinifera miR319f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>vvi-miR319c MIMAT0005704 Vitis vinifera miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>vvi-miR319b MIMAT0005703 Vitis vinifera miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>hsa-miR-1269a MIMAT0005923 Homo sapiens miR-1269a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>pta-miR319 MIMAT0004997 Pinus taeda miR319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mtr-miR319b-3p MIMAT0011082 Medicago truncatula miR319b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mmu-miR-682 MIMAT0003459 Mus musculus miR-682
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>mmu-miR-679-5p MIMAT0003455 Mus musculus miR-679-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 1 ggactg 6
>ssc-miR-301 MIMAT0002138 Sus scrofa miR-301
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ggactg 6
||||||
Sbjct: 6 ggactg 1
>ptc-miR319h MIMAT0002009 Populus trichocarpa miR319h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319g MIMAT0002008 Populus trichocarpa miR319g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319f MIMAT0002007 Populus trichocarpa miR319f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319e MIMAT0002006 Populus trichocarpa miR319e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319d MIMAT0002005 Populus trichocarpa miR319d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319c MIMAT0002004 Populus trichocarpa miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319b MIMAT0002003 Populus trichocarpa miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ptc-miR319a MIMAT0002002 Populus trichocarpa miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>dre-miR-455-3p MIMAT0031993 Danio rerio miR-455-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 gactgc 7
||||||
Sbjct: 8 gactgc 3
>zma-miR319d-3p MIMAT0001718 Zea mays miR319d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>zma-miR319b-3p MIMAT0001717 Zea mays miR319b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>zma-miR319c-3p MIMAT0001716 Zea mays miR319c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>zma-miR319a-3p MIMAT0001715 Zea mays miR319a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319c MIMAT0001691 Glycine max miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319b MIMAT0001685 Glycine max miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>gma-miR319a MIMAT0001684 Glycine max miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>mtr-miR319a-3p MIMAT0001653 Medicago truncatula miR319a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>sbi-miR319a MIMAT0001469 Sorghum bicolor miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>osa-miR319b MIMAT0001029 Oryza sativa miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>osa-miR319a-3p.2-3p MIMAT0001028 Oryza sativa miR319a-3p.2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ath-miR319c MIMAT0001016 Arabidopsis thaliana miR319c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ath-miR319b MIMAT0000512 Arabidopsis thaliana miR319b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ath-miR319a MIMAT0000511 Arabidopsis thaliana miR319a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 3 ggactg 8
>ath-miR166b-5p MIMAT0031881 Arabidopsis thaliana miR166b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 1 ggactg 6
>ath-miR166a-5p MIMAT0031880 Arabidopsis thaliana miR166a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ggactg 6
||||||
Sbjct: 1 ggactg 6
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 213
Number of extensions: 191
Number of successful extensions: 146
Number of sequences better than 100.0: 146
Number of HSP's gapped: 146
Number of HSP's successfully gapped: 146
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
