BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rrv-miR-rr1-9-3p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sly-miR167b-3p MIMAT0035458 Solanum lycopersicum miR167b-3p            14      20
gga-miR-7449-5p MIMAT0029052 Gallus gallus miR-7449-5p                 14      20
aca-miR-5435b-3p MIMAT0022090 Anolis carolinensis miR-5435b-3p         14      20
aly-miR167d-3p MIMAT0017480 Arabidopsis lyrata miR167d-3p              14      20
ata-miR167e-3p MIMAT0037109 Aegilops tauschii miR167e-3p               12      80
oha-miR-215-5p MIMAT0036831 Ophiophagus hannah miR-215-5p              12      80
chi-miR-215-5p MIMAT0036060 Capra hircus miR-215-5p                    12      80
ssa-miR-192a-5p MIMAT0032440 Salmo salar miR-192a-5p                   12      80
stu-miR167c-3p MIMAT0031304 Solanum tuberosum miR167c-3p               12      80
ptc-miR7828 MIMAT0030388 Populus trichocarpa miR7828                   12      80
bdi-miR7779-5p MIMAT0030312 Brachypodium distachyon miR7779-5p         12      80
cbn-miR-64j MIMAT0029698 Caenorhabditis brenneri miR-64j               12      80
ipu-miR-192 MIMAT0029446 Ictalurus punctatus miR-192                   12      80
ghr-miR7510a MIMAT0029158 Gossypium hirsutum miR7510a                  12      80
ghr-miR7496b MIMAT0029143 Gossypium hirsutum miR7496b                  12      80
ghr-miR7496a MIMAT0029142 Gossypium hirsutum miR7496a                  12      80
mdo-miR-7395-3p MIMAT0028889 Monodelphis domestica miR-7395-3p         12      80
ccr-miR-192 MIMAT0026250 Cyprinus carpio miR-192                       12      80
hsa-miR-6744-5p MIMAT0027389 Homo sapiens miR-6744-5p                  12      80
sma-miR-2d-5p MIMAT0032135 Schistosoma mansoni miR-2d-5p               12      80
cgr-miR-215-5p MIMAT0023853 Cricetulus griseus miR-215-5p              12      80
osa-miR5792 MIMAT0023259 Oryza sativa miR5792                          12      80
mtr-miR5556-3p MIMAT0022212 Medicago truncatula miR5556-3p             12      80
aca-miR-215-5p MIMAT0021873 Anolis carolinensis miR-215-5p             12      80
osa-miR5340 MIMAT0021413 Oryza sativa miR5340                          12      80
osa-miR5162 MIMAT0021115 Oryza sativa miR5162                          12      80
dme-miR-4942-3p MIMAT0020150 Drosophila melanogaster miR-4942-3p       12      80
sja-miR-2d-5p MIMAT0016278 Schistosoma japonicum miR-2d-5p             12      80
aly-miR3433-5p MIMAT0017685 Arabidopsis lyrata miR3433-5p              12      80
aly-miR167b-3p MIMAT0017476 Arabidopsis lyrata miR167b-3p              12      80
tgu-miR-215-5p MIMAT0014577 Taeniopygia guttata miR-215-5p             12      80
eca-miR-215 MIMAT0013190 Equus caballus miR-215                        12      80
mdo-miR-215 MIMAT0012751 Monodelphis domestica miR-215                 12      80
dsi-miR-959 MIMAT0012508 Drosophila simulans miR-959                   12      80
dps-miR-959-3p MIMAT0012258 Drosophila pseudoobscura miR-959-3p        12      80
bta-miR-2431-5p MIMAT0012001 Bos taurus miR-2431-5p                    12      80
sbi-miR821e MIMAT0011389 Sorghum bicolor miR821e                       12      80
sbi-miR821d MIMAT0011388 Sorghum bicolor miR821d                       12      80
sbi-miR821c MIMAT0011387 Sorghum bicolor miR821c                       12      80
sbi-miR821a MIMAT0011385 Sorghum bicolor miR821a                       12      80
ssc-miR-215 MIMAT0010192 Sus scrofa miR-215                            12      80
cfa-miR-215 MIMAT0009848 Canis familiaris miR-215                      12      80
mmu-miR-1934-3p MIMAT0017341 Mus musculus miR-1934-3p                  12      80
oan-miR-1419d-3p MIMAT0007254 Ornithorhynchus anatinus miR-1419d-3p    12      80
oan-miR-215-5p MIMAT0007000 Ornithorhynchus anatinus miR-215-5p        12      80
mcmv-miR-m88-1-5p MIMAT0005551 Mouse cytomegalovirus miR-m88-1-5p      12      80
smo-miR1098 MIMAT0005254 Selaginella moellendorffii miR1098            12      80
dme-miR-959-3p MIMAT0005473 Drosophila melanogaster miR-959-3p         12      80
osa-miR821c MIMAT0004084 Oryza sativa miR821c                          12      80
osa-miR821b MIMAT0004083 Oryza sativa miR821b                          12      80
osa-miR821a MIMAT0004082 Oryza sativa miR821a                          12      80
bta-miR-215 MIMAT0003797 Bos taurus miR-215                            12      80
xtr-miR-215 MIMAT0003628 Xenopus tropicalis miR-215                    12      80
xtr-miR-192 MIMAT0003615 Xenopus tropicalis miR-192                    12      80
rno-miR-215 MIMAT0003118 Rattus norvegicus miR-215                     12      80
tni-miR-192 MIMAT0002942 Tetraodon nigroviridis miR-192                12      80
fru-miR-192 MIMAT0002941 Fugu rubripes miR-192                         12      80
mne-miR-215 MIMAT0002736 Macaca nemestrina miR-215                     12      80
ggo-miR-215 MIMAT0002734 Gorilla gorilla miR-215                       12      80
ppy-miR-215 MIMAT0002732 Pongo pygmaeus miR-215                        12      80
ptr-miR-215 MIMAT0002730 Pan troglodytes miR-215                       12      80
mml-miR-215-5p MIMAT0002728 Macaca mulatta miR-215-5p                  12      80
zma-miR167g-3p MIMAT0015188 Zea mays miR167g-3p                        12      80
zma-miR167d-3p MIMAT0015144 Zea mays miR167d-3p                        12      80
dre-miR-192 MIMAT0001275 Danio rerio miR-192                           12      80
gga-miR-215-5p MIMAT0001134 Gallus gallus miR-215-5p                   12      80
ath-miR167c-3p MIMAT0031917 Arabidopsis thaliana miR167c-3p            12      80
mmu-miR-215-5p MIMAT0000904 Mus musculus miR-215-5p                    12      80
osa-miR167c-3p MIMAT0022860 Oryza sativa miR167c-3p                    12      80
hsa-miR-215-5p MIMAT0000272 Homo sapiens miR-215-5p                    12      80
>sly-miR167b-3p MIMAT0035458 Solanum lycopersicum miR167b-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ggtcatc 7
         |||||||
Sbjct: 2 ggtcatc 8
>gga-miR-7449-5p MIMAT0029052 Gallus gallus miR-7449-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ggtcatc 7
         |||||||
Sbjct: 2 ggtcatc 8
>aca-miR-5435b-3p MIMAT0022090 Anolis carolinensis miR-5435b-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ggtcatc 7
         |||||||
Sbjct: 7 ggtcatc 1
>aly-miR167d-3p MIMAT0017480 Arabidopsis lyrata miR167d-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ggtcatc 7
         |||||||
Sbjct: 2 ggtcatc 8
>ata-miR167e-3p MIMAT0037109 Aegilops tauschii miR167e-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>oha-miR-215-5p MIMAT0036831 Ophiophagus hannah miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>chi-miR-215-5p MIMAT0036060 Capra hircus miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ssa-miR-192a-5p MIMAT0032440 Salmo salar miR-192a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>stu-miR167c-3p MIMAT0031304 Solanum tuberosum miR167c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>ptc-miR7828 MIMAT0030388 Populus trichocarpa miR7828
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 6 gtcatc 1
>bdi-miR7779-5p MIMAT0030312 Brachypodium distachyon miR7779-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 3 ggtcat 8
>cbn-miR-64j MIMAT0029698 Caenorhabditis brenneri miR-64j
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 6 gtcatc 1
>ipu-miR-192 MIMAT0029446 Ictalurus punctatus miR-192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ghr-miR7510a MIMAT0029158 Gossypium hirsutum miR7510a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 3 ggtcat 8
>ghr-miR7496b MIMAT0029143 Gossypium hirsutum miR7496b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ghr-miR7496a MIMAT0029142 Gossypium hirsutum miR7496a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>mdo-miR-7395-3p MIMAT0028889 Monodelphis domestica miR-7395-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ccr-miR-192 MIMAT0026250 Cyprinus carpio miR-192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>hsa-miR-6744-5p MIMAT0027389 Homo sapiens miR-6744-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 8 gtcatc 3
>sma-miR-2d-5p MIMAT0032135 Schistosoma mansoni miR-2d-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 1 gtcatc 6
>cgr-miR-215-5p MIMAT0023853 Cricetulus griseus miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>osa-miR5792 MIMAT0023259 Oryza sativa miR5792
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 6 gtcatc 1
>mtr-miR5556-3p MIMAT0022212 Medicago truncatula miR5556-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 7 gtcatc 2
>aca-miR-215-5p MIMAT0021873 Anolis carolinensis miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>osa-miR5340 MIMAT0021413 Oryza sativa miR5340
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 7 gtcatc 2
>osa-miR5162 MIMAT0021115 Oryza sativa miR5162
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 8 ggtcat 3
>dme-miR-4942-3p MIMAT0020150 Drosophila melanogaster
         miR-4942-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 8 gtcatc 3
>sja-miR-2d-5p MIMAT0016278 Schistosoma japonicum miR-2d-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 1 gtcatc 6
>aly-miR3433-5p MIMAT0017685 Arabidopsis lyrata miR3433-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>aly-miR167b-3p MIMAT0017476 Arabidopsis lyrata miR167b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>tgu-miR-215-5p MIMAT0014577 Taeniopygia guttata miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>eca-miR-215 MIMAT0013190 Equus caballus miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>mdo-miR-215 MIMAT0012751 Monodelphis domestica miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>dsi-miR-959 MIMAT0012508 Drosophila simulans miR-959
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>dps-miR-959-3p MIMAT0012258 Drosophila pseudoobscura miR-959-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>bta-miR-2431-5p MIMAT0012001 Bos taurus miR-2431-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 3 ggtcat 8
>sbi-miR821e MIMAT0011389 Sorghum bicolor miR821e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>sbi-miR821d MIMAT0011388 Sorghum bicolor miR821d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>sbi-miR821c MIMAT0011387 Sorghum bicolor miR821c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>sbi-miR821a MIMAT0011385 Sorghum bicolor miR821a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>ssc-miR-215 MIMAT0010192 Sus scrofa miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>cfa-miR-215 MIMAT0009848 Canis familiaris miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>mmu-miR-1934-3p MIMAT0017341 Mus musculus miR-1934-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 8 gtcatc 3
>oan-miR-1419d-3p MIMAT0007254 Ornithorhynchus anatinus
         miR-1419d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>oan-miR-215-5p MIMAT0007000 Ornithorhynchus anatinus miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>mcmv-miR-m88-1-5p MIMAT0005551 Mouse cytomegalovirus
         miR-m88-1-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>smo-miR1098 MIMAT0005254 Selaginella moellendorffii miR1098
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 7 gtcatc 2
>dme-miR-959-3p MIMAT0005473 Drosophila melanogaster miR-959-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>osa-miR821c MIMAT0004084 Oryza sativa miR821c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>osa-miR821b MIMAT0004083 Oryza sativa miR821b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>osa-miR821a MIMAT0004082 Oryza sativa miR821a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gtcatc 7
         ||||||
Sbjct: 3 gtcatc 8
>bta-miR-215 MIMAT0003797 Bos taurus miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>xtr-miR-215 MIMAT0003628 Xenopus tropicalis miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>xtr-miR-192 MIMAT0003615 Xenopus tropicalis miR-192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>rno-miR-215 MIMAT0003118 Rattus norvegicus miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>tni-miR-192 MIMAT0002942 Tetraodon nigroviridis miR-192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>fru-miR-192 MIMAT0002941 Fugu rubripes miR-192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>mne-miR-215 MIMAT0002736 Macaca nemestrina miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ggo-miR-215 MIMAT0002734 Gorilla gorilla miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ppy-miR-215 MIMAT0002732 Pongo pygmaeus miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ptr-miR-215 MIMAT0002730 Pan troglodytes miR-215
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>mml-miR-215-5p MIMAT0002728 Macaca mulatta miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>zma-miR167g-3p MIMAT0015188 Zea mays miR167g-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>zma-miR167d-3p MIMAT0015144 Zea mays miR167d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>dre-miR-192 MIMAT0001275 Danio rerio miR-192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>gga-miR-215-5p MIMAT0001134 Gallus gallus miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>ath-miR167c-3p MIMAT0031917 Arabidopsis thaliana miR167c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 3 ggtcat 8
>mmu-miR-215-5p MIMAT0000904 Mus musculus miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
>osa-miR167c-3p MIMAT0022860 Oryza sativa miR167c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 1 ggtcat 6
>hsa-miR-215-5p MIMAT0000272 Homo sapiens miR-215-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ggtcat 6
         ||||||
Sbjct: 6 ggtcat 1
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 92
Number of extensions: 88
Number of successful extensions: 70
Number of sequences better than 100.0: 70
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 70
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)