BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prv-miR-8-5p
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
atr-miR8581 MIMAT0033865 Amborella trichopoda miR8581 14 27
mmu-miR-6944-5p MIMAT0027788 Mus musculus miR-6944-5p 14 27
gga-miR-6571-3p MIMAT0025650 Gallus gallus miR-6571-3p 14 27
ath-miR5640 MIMAT0022401 Arabidopsis thaliana miR5640 14 27
gma-miR1513b MIMAT0021008 Glycine max miR1513b 14 27
ame-miR-3717 MIMAT0018512 Apis mellifera miR-3717 14 27
osa-miR2100-5p MIMAT0010064 Oryza sativa miR2100-5p 14 27
ath-miR1886.1 MIMAT0007853 Arabidopsis thaliana miR1886.1 14 27
gma-miR1513a-5p MIMAT0007371 Glycine max miR1513a-5p 14 27
hsa-miR-1229-3p MIMAT0005584 Homo sapiens miR-1229-3p 14 27
mmu-miR-741-3p MIMAT0004236 Mus musculus miR-741-3p 14 27
>atr-miR8581 MIMAT0033865 Amborella trichopoda miR8581
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 tgagaga 8
|||||||
Sbjct: 1 tgagaga 7
>mmu-miR-6944-5p MIMAT0027788 Mus musculus miR-6944-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gtgagag 7
|||||||
Sbjct: 1 gtgagag 7
>gga-miR-6571-3p MIMAT0025650 Gallus gallus miR-6571-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 tgagaga 8
|||||||
Sbjct: 1 tgagaga 7
>ath-miR5640 MIMAT0022401 Arabidopsis thaliana miR5640
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 tgagaga 8
|||||||
Sbjct: 1 tgagaga 7
>gma-miR1513b MIMAT0021008 Glycine max miR1513b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 tgagaga 8
|||||||
Sbjct: 1 tgagaga 7
>ame-miR-3717 MIMAT0018512 Apis mellifera miR-3717
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: