BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prv-miR-8-5p
         (8 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

atr-miR8581 MIMAT0033865 Amborella trichopoda miR8581                  14      27
mmu-miR-6944-5p MIMAT0027788 Mus musculus miR-6944-5p                  14      27
gga-miR-6571-3p MIMAT0025650 Gallus gallus miR-6571-3p                 14      27
ath-miR5640 MIMAT0022401 Arabidopsis thaliana miR5640                  14      27
gma-miR1513b MIMAT0021008 Glycine max miR1513b                         14      27
ame-miR-3717 MIMAT0018512 Apis mellifera miR-3717                      14      27
osa-miR2100-5p MIMAT0010064 Oryza sativa miR2100-5p                    14      27
ath-miR1886.1 MIMAT0007853 Arabidopsis thaliana miR1886.1              14      27
gma-miR1513a-5p MIMAT0007371 Glycine max miR1513a-5p                   14      27
hsa-miR-1229-3p MIMAT0005584 Homo sapiens miR-1229-3p                  14      27
mmu-miR-741-3p MIMAT0004236 Mus musculus miR-741-3p                    14      27
>atr-miR8581 MIMAT0033865 Amborella trichopoda miR8581
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgagaga 8
         |||||||
Sbjct: 1 tgagaga 7
>mmu-miR-6944-5p MIMAT0027788 Mus musculus miR-6944-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 gtgagag 7
         |||||||
Sbjct: 1 gtgagag 7
>gga-miR-6571-3p MIMAT0025650 Gallus gallus miR-6571-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgagaga 8
         |||||||
Sbjct: 1 tgagaga 7
>ath-miR5640 MIMAT0022401 Arabidopsis thaliana miR5640
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgagaga 8
         |||||||
Sbjct: 1 tgagaga 7
>gma-miR1513b MIMAT0021008 Glycine max miR1513b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgagaga 8
         |||||||
Sbjct: 1 tgagaga 7
>ame-miR-3717 MIMAT0018512 Apis mellifera miR-3717
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: