BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tumv-miR-s72
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dvi-miR-969-5p MIMAT0035588 Drosophila virilis miR-969-5p 14 20
gra-miR8736 MIMAT0034148 Gossypium raimondii miR8736 14 20
gma-miR5037c MIMAT0021606 Glycine max miR5037c 14 20
hsa-miR-3692-3p MIMAT0018122 Homo sapiens miR-3692-3p 14 20
ata-miR9677-5p MIMAT0037224 Aegilops tauschii miR9677-5p 12 80
ata-miR396c-5p MIMAT0037170 Aegilops tauschii miR396c-5p 12 80
ata-miR396e-5p MIMAT0037168 Aegilops tauschii miR396e-5p 12 80
bra-miR396-5p MIMAT0035852 Brassica rapa miR396-5p 12 80
tae-miR9670-3p MIMAT0035785 Triticum aestivum miR9670-3p 12 80
sly-miR396b MIMAT0035481 Solanum lycopersicum miR396b 12 80
sly-miR396a-5p MIMAT0035455 Solanum lycopersicum miR396a-5p 12 80
gra-miR8759 MIMAT0034189 Gossypium raimondii miR8759 12 80
esi-miR8623b MIMAT0033972 Ectocarpus siliculosus miR8623b 12 80
atr-miR396e MIMAT0033942 Amborella trichopoda miR396e 12 80
atr-miR396c MIMAT0033940 Amborella trichopoda miR396c 12 80
atr-miR396b MIMAT0033939 Amborella trichopoda miR396b 12 80
sma-miR-8432-3p MIMAT0033569 Schistosoma mansoni miR-8432-3p 12 80
lus-miR396e MIMAT0031858 Linum usitatissimum miR396e 12 80
cpa-miR396 MIMAT0031822 Carica papaya miR396 12 80
ppe-miR8122-5p MIMAT0031523 Prunus persica miR8122-5p 12 80
ppe-miR396b MIMAT0031495 Prunus persica miR396b 12 80
ppe-miR396a MIMAT0031494 Prunus persica miR396a 12 80
stu-miR396-5p MIMAT0031335 Solanum tuberosum miR396-5p 12 80
bdi-miR7777-3p.1 MIMAT0030309 Brachypodium distachyon miR7777-3p.1 12 80
ama-miR396-5p MIMAT0031154 Avicennia marina miR396-5p 12 80
mmu-miR-7686-5p MIMAT0029898 Mus musculus miR-7686-5p 12 80
mmu-miR-7651-5p MIMAT0029804 Mus musculus miR-7651-5p 12 80
mes-miR396f MIMAT0029278 Manihot esculenta miR396f 12 80
mes-miR396e MIMAT0029277 Manihot esculenta miR396e 12 80
mes-miR396d MIMAT0029276 Manihot esculenta miR396d 12 80
mes-miR396c MIMAT0029275 Manihot esculenta miR396c 12 80
mes-miR396b MIMAT0029274 Manihot esculenta miR396b 12 80
mes-miR396a MIMAT0029273 Manihot esculenta miR396a 12 80
mdo-miR-7325-3p MIMAT0028651 Monodelphis domestica miR-7325-3p 12 80
mml-miR-7166-3p MIMAT0028267 Macaca mulatta miR-7166-3p 12 80
cme-miR396e MIMAT0026162 Cucumis melo miR396e 12 80
cme-miR396d MIMAT0026147 Cucumis melo miR396d 12 80
cme-miR396c MIMAT0026146 Cucumis melo miR396c 12 80
cme-miR396b MIMAT0026145 Cucumis melo miR396b 12 80
cme-miR396a MIMAT0026106 Cucumis melo miR396a 12 80
mdm-miR396g MIMAT0025995 Malus domestica miR396g 12 80
mdm-miR396f MIMAT0025994 Malus domestica miR396f 12 80
mdm-miR396e MIMAT0025993 Malus domestica miR396e 12 80
mdm-miR396d MIMAT0025992 Malus domestica miR396d 12 80
mdm-miR396c MIMAT0025991 Malus domestica miR396c 12 80
mdm-miR396b MIMAT0025990 Malus domestica miR396b 12 80
mdm-miR396a MIMAT0025989 Malus domestica miR396a 12 80
hsa-miR-6833-5p MIMAT0027566 Homo sapiens miR-6833-5p 12 80
gga-miR-6707-5p MIMAT0025817 Gallus gallus miR-6707-5p 12 80
gga-miR-6682-3p MIMAT0025787 Gallus gallus miR-6682-3p 12 80
gga-miR-6670-5p MIMAT0025772 Gallus gallus miR-6670-5p 12 80
hsa-miR-6509-3p MIMAT0025475 Homo sapiens miR-6509-3p 12 80
hbr-miR396b MIMAT0025287 Hevea brasiliensis miR396b 12 80
rno-miR-6323 MIMAT0025062 Rattus norvegicus miR-6323 12 80
nta-miR396c MIMAT0024710 Nicotiana tabacum miR396c 12 80
nta-miR396b MIMAT0024709 Nicotiana tabacum miR396b 12 80
nta-miR396a MIMAT0024708 Nicotiana tabacum miR396a 12 80
lus-miR396c MIMAT0027213 Linum usitatissimum miR396c 12 80
lus-miR396b MIMAT0027212 Linum usitatissimum miR396b 12 80
lus-miR396a MIMAT0027207 Linum usitatissimum miR396a 12 80
cca-miR396a-5p MIMAT0024529 Cynara cardunculus miR396a-5p 12 80
dpr-miR396 MIMAT0023536 Digitalis purpurea miR396 12 80
spu-miR-5994 MIMAT0023516 Strongylocentrotus purpuratus miR-5994 12 80
gma-miR396k-5p MIMAT0032132 Glycine max miR396k-5p 12 80
ssl-miR396 MIMAT0022517 Salvia sclarea miR396 12 80
amg-miR396 MIMAT0022680 Acacia mangium miR396 12 80
aau-miR396 MIMAT0022674 Acacia auriculiformis miR396 12 80
gma-miR396i-5p MIMAT0021669 Glycine max miR396i-5p 12 80
mtr-miR2592bk MIMAT0021231 Medicago truncatula miR2592bk 12 80
mtr-miR2592bj MIMAT0021230 Medicago truncatula miR2592bj 12 80
mtr-miR2592bi MIMAT0021229 Medicago truncatula miR2592bi 12 80
ssp-miR396 MIMAT0020295 Saccharum sp. miR396 12 80
bdi-miR396e-5p MIMAT0020683 Brachypodium distachyon miR396e-5p 12 80
bdi-miR396c-5p MIMAT0020676 Brachypodium distachyon miR396c-5p 12 80
bdi-miR396d-5p MIMAT0020671 Brachypodium distachyon miR396d-5p 12 80
bfl-miR-4906 MIMAT0020502 Branchiostoma floridae miR-4906 12 80
tcc-miR396e MIMAT0020431 Theobroma cacao miR396e 12 80
tcc-miR396d MIMAT0020430 Theobroma cacao miR396d 12 80
tcc-miR396c MIMAT0020429 Theobroma cacao miR396c 12 80
tcc-miR396b MIMAT0020428 Theobroma cacao miR396b 12 80
tcc-miR396a MIMAT0020427 Theobroma cacao miR396a 12 80
hsa-miR-3978 MIMAT0019363 Homo sapiens miR-3978 12 80
bcy-miR396b MIMAT0020966 Bruguiera cylindrica miR396b 12 80
bcy-miR396a MIMAT0020965 Bruguiera cylindrica miR396a 12 80
bgy-miR396b MIMAT0020962 Bruguiera gymnorhiza miR396b 12 80
bgy-miR396a MIMAT0020961 Bruguiera gymnorhiza miR396a 12 80
csi-miR396b MIMAT0018464 Citrus sinensis miR396b 12 80
csi-miR396a MIMAT0018463 Citrus sinensis miR396a 12 80
gma-miR396e MIMAT0018345 Glycine max miR396e 12 80
tca-miR-750-5p MIMAT0018820 Tribolium castaneum miR-750-5p 12 80
tca-miR-3804a-3p MIMAT0018625 Tribolium castaneum miR-3804a-3p 12 80
pab-miR396c MIMAT0018154 Picea abies miR396c 12 80
pab-miR396b MIMAT0018153 Picea abies miR396b 12 80
pab-miR396a MIMAT0018152 Picea abies miR396a 12 80
cin-miR-4006f-5p MIMAT0016482 Ciona intestinalis miR-4006f-5p 12 80
cin-miR-4006e-5p MIMAT0016480 Ciona intestinalis miR-4006e-5p 12 80
cin-miR-4006a-5p MIMAT0016478 Ciona intestinalis miR-4006a-5p 12 80
cin-miR-4006d-5p MIMAT0016476 Ciona intestinalis miR-4006d-5p 12 80
cin-miR-4006c-5p MIMAT0016474 Ciona intestinalis miR-4006c-5p 12 80
cin-miR-4006b-5p MIMAT0016472 Ciona intestinalis miR-4006b-5p 12 80
cin-miR-4001h-5p MIMAT0016459 Ciona intestinalis miR-4001h-5p 12 80
cin-miR-4001b-5p MIMAT0016446 Ciona intestinalis miR-4001b-5p 12 80
cin-miR-4001g-3p MIMAT0016458 Ciona intestinalis miR-4001g-3p 12 80
cin-miR-4001f-5p MIMAT0016456 Ciona intestinalis miR-4001f-5p 12 80
cin-miR-4001e-5p MIMAT0016454 Ciona intestinalis miR-4001e-5p 12 80
cin-miR-4001d-5p MIMAT0016452 Ciona intestinalis miR-4001d-5p 12 80
cin-miR-4001a-5p MIMAT0016444 Ciona intestinalis miR-4001a-5p 12 80
esi-miR3455-3p MIMAT0017756 Ectocarpus siliculosus miR3455-3p 12 80
aly-miR396b-5p MIMAT0017559 Arabidopsis lyrata miR396b-5p 12 80
aly-miR396a-5p MIMAT0017557 Arabidopsis lyrata miR396a-5p 12 80
bmo-miR-3243 MIMAT0015425 Bombyx mori miR-3243 12 80
rco-miR396 MIMAT0014192 Ricinus communis miR396 12 80
ccl-miR396 MIMAT0014078 Citrus clementina miR396 12 80
zma-miR396f-5p MIMAT0014015 Zea mays miR396f-5p 12 80
zma-miR396e-5p MIMAT0014014 Zea mays miR396e-5p 12 80
bmo-miR-2801 MIMAT0013705 Bombyx mori miR-2801 12 80
aqc-miR396b MIMAT0012577 Aquilegia caerulea miR396b 12 80
aqc-miR396a MIMAT0012576 Aquilegia caerulea miR396a 12 80
dsi-miR-969-5p MIMAT0012479 Drosophila simulans miR-969-5p 12 80
dps-miR-969-5p MIMAT0012275 Drosophila pseudoobscura miR-969-5p 12 80
bta-miR-2477 MIMAT0012069 Bos taurus miR-2477 12 80
sbi-miR396e MIMAT0011358 Sorghum bicolor miR396e 12 80
lja-miR396 MIMAT0010088 Lotus japonicus miR396 12 80
gma-miR396c MIMAT0010079 Glycine max miR396c 12 80
zma-miR396d MIMAT0010077 Zea mays miR396d 12 80
zma-miR396c MIMAT0010076 Zea mays miR396c 12 80
osa-miR1320-5p MIMAT0009137 Oryza sativa miR1320-5p 12 80
vvi-miR396c MIMAT0006560 Vitis vinifera miR396c 12 80
odi-miR-1478 MIMAT0006030 Oikopleura dioica miR-1478 12 80
oan-miR-1364 MIMAT0007027 Ornithorhynchus anatinus miR-1364 12 80
oan-miR-1355-5p MIMAT0006951 Ornithorhynchus anatinus miR-1355-5p 12 80
vvi-miR396d MIMAT0005726 Vitis vinifera miR396d 12 80
vvi-miR396b MIMAT0005725 Vitis vinifera miR396b 12 80
vvi-miR396a MIMAT0005724 Vitis vinifera miR396a 12 80
cre-miR1144a.2 MIMAT0005379 Chlamydomonas reinhardtii miR1144a.2 12 80
smo-miR396 MIMAT0005227 Selaginella moellendorffii miR396 12 80
dme-miR-969-5p MIMAT0005485 Drosophila melanogaster miR-969-5p 12 80
pta-miR396 MIMAT0004999 Pinus taeda miR396 12 80
bna-miR396a MIMAT0004448 Brassica napus miR396a 12 80
ghr-miR396b MIMAT0005819 Gossypium hirsutum miR396b 12 80
ghr-miR396a MIMAT0005818 Gossypium hirsutum miR396a 12 80
mtr-miR396b-5p MIMAT0011108 Medicago truncatula miR396b-5p 12 80
mtr-miR396a-5p MIMAT0011107 Medicago truncatula miR396a-5p 12 80
ptc-miR396g-5p MIMAT0002037 Populus trichocarpa miR396g-5p 12 80
ptc-miR396f MIMAT0002036 Populus trichocarpa miR396f 12 80
ptc-miR396e-5p MIMAT0002035 Populus trichocarpa miR396e-5p 12 80
ptc-miR396d MIMAT0002034 Populus trichocarpa miR396d 12 80
ptc-miR396c MIMAT0002033 Populus trichocarpa miR396c 12 80
ptc-miR396b MIMAT0002032 Populus trichocarpa miR396b 12 80
ptc-miR396a MIMAT0002031 Populus trichocarpa miR396a 12 80
zma-miR396a-5p MIMAT0001703 Zea mays miR396a-5p 12 80
zma-miR396b-5p MIMAT0001702 Zea mays miR396b-5p 12 80
gma-miR396b-5p MIMAT0001688 Glycine max miR396b-5p 12 80
gma-miR396a-5p MIMAT0001687 Glycine max miR396a-5p 12 80
sof-miR396 MIMAT0001657 Saccharum officinarum miR396 12 80
sbi-miR396c MIMAT0001436 Sorghum bicolor miR396c 12 80
sbi-miR396a MIMAT0001435 Sorghum bicolor miR396a 12 80
sbi-miR396b MIMAT0001434 Sorghum bicolor miR396b 12 80
osa-miR396c-5p MIMAT0000979 Oryza sativa miR396c-5p 12 80
osa-miR396b-5p MIMAT0000978 Oryza sativa miR396b-5p 12 80
osa-miR396a-5p MIMAT0000977 Oryza sativa miR396a-5p 12 80
ath-miR396b-5p MIMAT0000945 Arabidopsis thaliana miR396b-5p 12 80
ath-miR396a-5p MIMAT0000944 Arabidopsis thaliana miR396a-5p 12 80
>dvi-miR-969-5p MIMAT0035588 Drosophila virilis miR-969-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gtggaac 7
|||||||
Sbjct: 8 gtggaac 2
>gra-miR8736 MIMAT0034148 Gossypium raimondii miR8736
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gtggaac 7
|||||||
Sbjct: 1 gtggaac 7
>gma-miR5037c MIMAT0021606 Glycine max miR5037c
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gtggaac 7
|||||||
Sbjct: 2 gtggaac 8
>hsa-miR-3692-3p MIMAT0018122 Homo sapiens miR-3692-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gtggaac 7
|||||||
Sbjct: 7 gtggaac 1
>ata-miR9677-5p MIMAT0037224 Aegilops tauschii miR9677-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ata-miR396c-5p MIMAT0037170 Aegilops tauschii miR396c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ata-miR396e-5p MIMAT0037168 Aegilops tauschii miR396e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bra-miR396-5p MIMAT0035852 Brassica rapa miR396-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>tae-miR9670-3p MIMAT0035785 Triticum aestivum miR9670-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>sly-miR396b MIMAT0035481 Solanum lycopersicum miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>sly-miR396a-5p MIMAT0035455 Solanum lycopersicum miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>gra-miR8759 MIMAT0034189 Gossypium raimondii miR8759
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>esi-miR8623b MIMAT0033972 Ectocarpus siliculosus miR8623b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 3 tggaac 8
>atr-miR396e MIMAT0033942 Amborella trichopoda miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>atr-miR396c MIMAT0033940 Amborella trichopoda miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>atr-miR396b MIMAT0033939 Amborella trichopoda miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>sma-miR-8432-3p MIMAT0033569 Schistosoma mansoni miR-8432-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 3 tggaac 8
>lus-miR396e MIMAT0031858 Linum usitatissimum miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cpa-miR396 MIMAT0031822 Carica papaya miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ppe-miR8122-5p MIMAT0031523 Prunus persica miR8122-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ppe-miR396b MIMAT0031495 Prunus persica miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ppe-miR396a MIMAT0031494 Prunus persica miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>stu-miR396-5p MIMAT0031335 Solanum tuberosum miR396-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bdi-miR7777-3p.1 MIMAT0030309 Brachypodium distachyon
miR7777-3p.1
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 8 tggaac 3
>ama-miR396-5p MIMAT0031154 Avicennia marina miR396-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mmu-miR-7686-5p MIMAT0029898 Mus musculus miR-7686-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 8 gtggaa 3
>mmu-miR-7651-5p MIMAT0029804 Mus musculus miR-7651-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>mes-miR396f MIMAT0029278 Manihot esculenta miR396f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mes-miR396e MIMAT0029277 Manihot esculenta miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mes-miR396d MIMAT0029276 Manihot esculenta miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mes-miR396c MIMAT0029275 Manihot esculenta miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mes-miR396b MIMAT0029274 Manihot esculenta miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mes-miR396a MIMAT0029273 Manihot esculenta miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdo-miR-7325-3p MIMAT0028651 Monodelphis domestica miR-7325-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>mml-miR-7166-3p MIMAT0028267 Macaca mulatta miR-7166-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 1 gtggaa 6
>cme-miR396e MIMAT0026162 Cucumis melo miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cme-miR396d MIMAT0026147 Cucumis melo miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cme-miR396c MIMAT0026146 Cucumis melo miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cme-miR396b MIMAT0026145 Cucumis melo miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cme-miR396a MIMAT0026106 Cucumis melo miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396g MIMAT0025995 Malus domestica miR396g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396f MIMAT0025994 Malus domestica miR396f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396e MIMAT0025993 Malus domestica miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396d MIMAT0025992 Malus domestica miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396c MIMAT0025991 Malus domestica miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396b MIMAT0025990 Malus domestica miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mdm-miR396a MIMAT0025989 Malus domestica miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>hsa-miR-6833-5p MIMAT0027566 Homo sapiens miR-6833-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>gga-miR-6707-5p MIMAT0025817 Gallus gallus miR-6707-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 3 tggaac 8
>gga-miR-6682-3p MIMAT0025787 Gallus gallus miR-6682-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>gga-miR-6670-5p MIMAT0025772 Gallus gallus miR-6670-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 1 gtggaa 6
>hsa-miR-6509-3p MIMAT0025475 Homo sapiens miR-6509-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>hbr-miR396b MIMAT0025287 Hevea brasiliensis miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>rno-miR-6323 MIMAT0025062 Rattus norvegicus miR-6323
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>nta-miR396c MIMAT0024710 Nicotiana tabacum miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>nta-miR396b MIMAT0024709 Nicotiana tabacum miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>nta-miR396a MIMAT0024708 Nicotiana tabacum miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>lus-miR396c MIMAT0027213 Linum usitatissimum miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>lus-miR396b MIMAT0027212 Linum usitatissimum miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>lus-miR396a MIMAT0027207 Linum usitatissimum miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cca-miR396a-5p MIMAT0024529 Cynara cardunculus miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>dpr-miR396 MIMAT0023536 Digitalis purpurea miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>spu-miR-5994 MIMAT0023516 Strongylocentrotus purpuratus
miR-5994
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>gma-miR396k-5p MIMAT0032132 Glycine max miR396k-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ssl-miR396 MIMAT0022517 Salvia sclarea miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>amg-miR396 MIMAT0022680 Acacia mangium miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>aau-miR396 MIMAT0022674 Acacia auriculiformis miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>gma-miR396i-5p MIMAT0021669 Glycine max miR396i-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mtr-miR2592bk MIMAT0021231 Medicago truncatula miR2592bk
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>mtr-miR2592bj MIMAT0021230 Medicago truncatula miR2592bj
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>mtr-miR2592bi MIMAT0021229 Medicago truncatula miR2592bi
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>ssp-miR396 MIMAT0020295 Saccharum sp. miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bdi-miR396e-5p MIMAT0020683 Brachypodium distachyon miR396e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bdi-miR396c-5p MIMAT0020676 Brachypodium distachyon miR396c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bdi-miR396d-5p MIMAT0020671 Brachypodium distachyon miR396d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bfl-miR-4906 MIMAT0020502 Branchiostoma floridae miR-4906
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 7 tggaac 2
>tcc-miR396e MIMAT0020431 Theobroma cacao miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>tcc-miR396d MIMAT0020430 Theobroma cacao miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>tcc-miR396c MIMAT0020429 Theobroma cacao miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>tcc-miR396b MIMAT0020428 Theobroma cacao miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>tcc-miR396a MIMAT0020427 Theobroma cacao miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>hsa-miR-3978 MIMAT0019363 Homo sapiens miR-3978
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 1 gtggaa 6
>bcy-miR396b MIMAT0020966 Bruguiera cylindrica miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bcy-miR396a MIMAT0020965 Bruguiera cylindrica miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bgy-miR396b MIMAT0020962 Bruguiera gymnorhiza miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bgy-miR396a MIMAT0020961 Bruguiera gymnorhiza miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>csi-miR396b MIMAT0018464 Citrus sinensis miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>csi-miR396a MIMAT0018463 Citrus sinensis miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>gma-miR396e MIMAT0018345 Glycine max miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>tca-miR-750-5p MIMAT0018820 Tribolium castaneum miR-750-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>tca-miR-3804a-3p MIMAT0018625 Tribolium castaneum miR-3804a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 8 tggaac 3
>pab-miR396c MIMAT0018154 Picea abies miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>pab-miR396b MIMAT0018153 Picea abies miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>pab-miR396a MIMAT0018152 Picea abies miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cin-miR-4006f-5p MIMAT0016482 Ciona intestinalis miR-4006f-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4006e-5p MIMAT0016480 Ciona intestinalis miR-4006e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4006a-5p MIMAT0016478 Ciona intestinalis miR-4006a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4006d-5p MIMAT0016476 Ciona intestinalis miR-4006d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4006c-5p MIMAT0016474 Ciona intestinalis miR-4006c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4006b-5p MIMAT0016472 Ciona intestinalis miR-4006b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001h-5p MIMAT0016459 Ciona intestinalis miR-4001h-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001b-5p MIMAT0016446 Ciona intestinalis miR-4001b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001g-3p MIMAT0016458 Ciona intestinalis miR-4001g-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001f-5p MIMAT0016456 Ciona intestinalis miR-4001f-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001e-5p MIMAT0016454 Ciona intestinalis miR-4001e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001d-5p MIMAT0016452 Ciona intestinalis miR-4001d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>cin-miR-4001a-5p MIMAT0016444 Ciona intestinalis miR-4001a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>esi-miR3455-3p MIMAT0017756 Ectocarpus siliculosus miR3455-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 3 gtggaa 8
>aly-miR396b-5p MIMAT0017559 Arabidopsis lyrata miR396b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>aly-miR396a-5p MIMAT0017557 Arabidopsis lyrata miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bmo-miR-3243 MIMAT0015425 Bombyx mori miR-3243
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>rco-miR396 MIMAT0014192 Ricinus communis miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ccl-miR396 MIMAT0014078 Citrus clementina miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>zma-miR396f-5p MIMAT0014015 Zea mays miR396f-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>zma-miR396e-5p MIMAT0014014 Zea mays miR396e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bmo-miR-2801 MIMAT0013705 Bombyx mori miR-2801
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 1 gtggaa 6
>aqc-miR396b MIMAT0012577 Aquilegia caerulea miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>aqc-miR396a MIMAT0012576 Aquilegia caerulea miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>dsi-miR-969-5p MIMAT0012479 Drosophila simulans miR-969-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 8 tggaac 3
>dps-miR-969-5p MIMAT0012275 Drosophila pseudoobscura miR-969-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 8 tggaac 3
>bta-miR-2477 MIMAT0012069 Bos taurus miR-2477
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gtggaa 6
||||||
Sbjct: 1 gtggaa 6
>sbi-miR396e MIMAT0011358 Sorghum bicolor miR396e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>lja-miR396 MIMAT0010088 Lotus japonicus miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>gma-miR396c MIMAT0010079 Glycine max miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>zma-miR396d MIMAT0010077 Zea mays miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>zma-miR396c MIMAT0010076 Zea mays miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>osa-miR1320-5p MIMAT0009137 Oryza sativa miR1320-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>vvi-miR396c MIMAT0006560 Vitis vinifera miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>odi-miR-1478 MIMAT0006030 Oikopleura dioica miR-1478
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>oan-miR-1364 MIMAT0007027 Ornithorhynchus anatinus miR-1364
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>oan-miR-1355-5p MIMAT0006951 Ornithorhynchus anatinus
miR-1355-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 7 tggaac 2
>vvi-miR396d MIMAT0005726 Vitis vinifera miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>vvi-miR396b MIMAT0005725 Vitis vinifera miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>vvi-miR396a MIMAT0005724 Vitis vinifera miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>cre-miR1144a.2 MIMAT0005379 Chlamydomonas reinhardtii
miR1144a.2
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tggaac 7
||||||
Sbjct: 1 tggaac 6
>smo-miR396 MIMAT0005227 Selaginella moellendorffii miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>dme-miR-969-5p MIMAT0005485 Drosophila melanogaster miR-969-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tggaac 7
||||||
Sbjct: 8 tggaac 3
>pta-miR396 MIMAT0004999 Pinus taeda miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>bna-miR396a MIMAT0004448 Brassica napus miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ghr-miR396b MIMAT0005819 Gossypium hirsutum miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ghr-miR396a MIMAT0005818 Gossypium hirsutum miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mtr-miR396b-5p MIMAT0011108 Medicago truncatula miR396b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>mtr-miR396a-5p MIMAT0011107 Medicago truncatula miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396g-5p MIMAT0002037 Populus trichocarpa miR396g-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396f MIMAT0002036 Populus trichocarpa miR396f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396e-5p MIMAT0002035 Populus trichocarpa miR396e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396d MIMAT0002034 Populus trichocarpa miR396d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396c MIMAT0002033 Populus trichocarpa miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396b MIMAT0002032 Populus trichocarpa miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ptc-miR396a MIMAT0002031 Populus trichocarpa miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>zma-miR396a-5p MIMAT0001703 Zea mays miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>zma-miR396b-5p MIMAT0001702 Zea mays miR396b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>gma-miR396b-5p MIMAT0001688 Glycine max miR396b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>gma-miR396a-5p MIMAT0001687 Glycine max miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>sof-miR396 MIMAT0001657 Saccharum officinarum miR396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>sbi-miR396c MIMAT0001436 Sorghum bicolor miR396c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>sbi-miR396a MIMAT0001435 Sorghum bicolor miR396a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>sbi-miR396b MIMAT0001434 Sorghum bicolor miR396b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>osa-miR396c-5p MIMAT0000979 Oryza sativa miR396c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>osa-miR396b-5p MIMAT0000978 Oryza sativa miR396b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>osa-miR396a-5p MIMAT0000977 Oryza sativa miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ath-miR396b-5p MIMAT0000945 Arabidopsis thaliana miR396b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
>ath-miR396a-5p MIMAT0000944 Arabidopsis thaliana miR396a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gtggaa 6
||||||
Sbjct: 6 gtggaa 1
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 187
Number of extensions: 183
Number of successful extensions: 163
Number of sequences better than 100.0: 163
Number of HSP's gapped: 163
Number of HSP's successfully gapped: 163
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
