BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ebv-miR-bart9
         (8 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ebv-miR-BART9-3p MIMAT0003419 Epstein Barr miR-BART9-3p                16   6.9  
ata-miR395b-3p MIMAT0037151 Aegilops tauschii miR395b-3p               14      27
oha-miR-200a MIMAT0036807 Ophiophagus hannah miR-200a                  14      27
tch-miR-141-3p MIMAT0036489 Tupaia chinensis miR-141-3p                14      27
tch-miR-200a-3p MIMAT0036466 Tupaia chinensis miR-200a-3p              14      27
gma-miR9746i MIMAT0036383 Glycine max miR9746i                         14      27
gma-miR9746h MIMAT0036373 Glycine max miR9746h                         14      27
gma-miR9746g MIMAT0036372 Glycine max miR9746g                         14      27
gma-miR9746f MIMAT0036371 Glycine max miR9746f                         14      27
gma-miR9746e MIMAT0036370 Glycine max miR9746e                         14      27
gma-miR9746d MIMAT0036369 Glycine max miR9746d                         14      27
gma-miR9746c MIMAT0036368 Glycine max miR9746c                         14      27
gma-miR9746b MIMAT0036367 Glycine max miR9746b                         14      27
gma-miR9746a MIMAT0036366 Glycine max miR9746a                         14      27
chi-miR-200a MIMAT0036045 Capra hircus miR-200a                        14      27
chi-miR-141 MIMAT0035962 Capra hircus miR-141                          14      27
dvi-miR-9549-5p MIMAT0035642 Drosophila virilis miR-9549-5p            14      27
efu-miR-141 MIMAT0035097 Eptesicus fuscus miR-141                      14      27
efu-miR-200a MIMAT0035013 Eptesicus fuscus miR-200a                    14      27
eca-miR-9158 MIMAT0034735 Equus caballus miR-9158                      14      27
ssa-miR-200b-3p MIMAT0032480 Salmo salar miR-200b-3p                   14      27
bbe-miR-200c-3p MIMAT0031610 Branchiostoma belcheri miR-200c-3p        14      27
prd-miR-7937-3p MIMAT0030733 Panagrellus redivivus miR-7937-3p         14      27
ipu-miR-200a MIMAT0029453 Ictalurus punctatus miR-200a                 14      27
ipu-miR-141 MIMAT0029418 Ictalurus punctatus miR-141                   14      27
gga-miR-7444-3p MIMAT0029043 Gallus gallus miR-7444-3p                 14      27
oan-miR-7436-5p MIMAT0029026 Ornithorhynchus anatinus miR-7436-5p      14      27
ccr-miR-200a MIMAT0026258 Cyprinus carpio miR-200a                     14      27
ggo-miR-200a MIMAT0024300 Gorilla gorilla miR-200a                     14      27
cgr-miR-141 MIMAT0023769 Cricetulus griseus miR-141                    14      27
sha-miR-141 MIMAT0022826 Sarcophilus harrisii miR-141                  14      27
sha-miR-200a MIMAT0022805 Sarcophilus harrisii miR-200a                14      27
aca-miR-200a-3p MIMAT0021845 Anolis carolinensis miR-200a-3p           14      27
bdi-miR395d-3p MIMAT0020723 Brachypodium distachyon miR395d-3p         14      27
cin-miR-4139-3p MIMAT0016737 Ciona intestinalis miR-4139-3p            14      27
rno-miR-3592 MIMAT0017895 Rattus norvegicus miR-3592                   14      27
ppy-miR-200a MIMAT0015796 Pongo pygmaeus miR-200a                      14      27
tgu-miR-200a-3p MIMAT0014545 Taeniopygia guttata miR-200a-3p           14      27
eca-miR-141 MIMAT0012970 Equus caballus miR-141                        14      27
eca-miR-200a MIMAT0012909 Equus caballus miR-200a                      14      27
mtr-miR2588b MIMAT0013259 Medicago truncatula miR2588b                 14      27
mtr-miR2588a MIMAT0013258 Medicago truncatula miR2588a                 14      27
bfl-miR-200c MIMAT0009493 Branchiostoma floridae miR-200c              14      27
bta-miR-141 MIMAT0009232 Bos taurus miR-141                            14      27
ptr-miR-200a MIMAT0008063 Pan troglodytes miR-200a                     14      27
ptr-miR-141 MIMAT0008036 Pan troglodytes miR-141                       14      27
mml-miR-200a-3p MIMAT0006233 Macaca mulatta miR-200a-3p                14      27
gma-miR1519 MIMAT0007378 Glycine max miR1519                           14      27
csa-miR-141 MIMAT0006129 Ciona savignyi miR-141                        14      27
cin-miR-141-3p MIMAT0006103 Ciona intestinalis miR-141-3p              14      27
oan-miR-200a-3p MIMAT0006936 Ornithorhynchus anatinus miR-200a-3p      14      27
mdo-miR-200a-3p MIMAT0004158 Monodelphis domestica miR-200a-3p         14      27
mdo-miR-141-3p MIMAT0004151 Monodelphis domestica miR-141-3p           14      27
sme-miR-87a-5p MIMAT0012109 Schmidtea mediterranea miR-87a-5p          14      27
bta-miR-200a MIMAT0003822 Bos taurus miR-200a                          14      27
xtr-miR-200a MIMAT0003693 Xenopus tropicalis miR-200a                  14      27
tni-miR-200a MIMAT0002982 Tetraodon nigroviridis miR-200a              14      27
fru-miR-200a MIMAT0002981 Fugu rubripes miR-200a                       14      27
dre-miR-200a-3p MIMAT0001861 Danio rerio miR-200a-3p                   14      27
dre-miR-141-3p MIMAT0001837 Danio rerio miR-141-3p                     14      27
gga-miR-200a-3p MIMAT0001171 Gallus gallus miR-200a-3p                 14      27
rno-miR-200a-3p MIMAT0000874 Rattus norvegicus miR-200a-3p             14      27
rno-miR-141-3p MIMAT0000846 Rattus norvegicus miR-141-3p               14      27
hsa-miR-200a-3p MIMAT0000682 Homo sapiens miR-200a-3p                  14      27
mmu-miR-200a-3p MIMAT0000519 Mus musculus miR-200a-3p                  14      27
hsa-miR-141-3p MIMAT0000432 Homo sapiens miR-141-3p                    14      27
mmu-miR-141-3p MIMAT0000153 Mus musculus miR-141-3p                    14      27
>ebv-miR-BART9-3p MIMAT0003419 Epstein Barr miR-BART9-3p
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 taacactt 8
         ||||||||
Sbjct: 1 taacactt 8
>ata-miR395b-3p MIMAT0037151 Aegilops tauschii miR395b-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 7 aacactt 1
>oha-miR-200a MIMAT0036807 Ophiophagus hannah miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>tch-miR-141-3p MIMAT0036489 Tupaia chinensis miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>tch-miR-200a-3p MIMAT0036466 Tupaia chinensis miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>gma-miR9746i MIMAT0036383 Glycine max miR9746i
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746h MIMAT0036373 Glycine max miR9746h
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746g MIMAT0036372 Glycine max miR9746g
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746f MIMAT0036371 Glycine max miR9746f
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746e MIMAT0036370 Glycine max miR9746e
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746d MIMAT0036369 Glycine max miR9746d
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746c MIMAT0036368 Glycine max miR9746c
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746b MIMAT0036367 Glycine max miR9746b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>gma-miR9746a MIMAT0036366 Glycine max miR9746a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>chi-miR-200a MIMAT0036045 Capra hircus miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>chi-miR-141 MIMAT0035962 Capra hircus miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>dvi-miR-9549-5p MIMAT0035642 Drosophila virilis miR-9549-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 taacact 7
         |||||||
Sbjct: 8 taacact 2
>efu-miR-141 MIMAT0035097 Eptesicus fuscus miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>efu-miR-200a MIMAT0035013 Eptesicus fuscus miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>eca-miR-9158 MIMAT0034735 Equus caballus miR-9158
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>ssa-miR-200b-3p MIMAT0032480 Salmo salar miR-200b-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>bbe-miR-200c-3p MIMAT0031610 Branchiostoma belcheri miR-200c-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>prd-miR-7937-3p MIMAT0030733 Panagrellus redivivus miR-7937-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 1 aacactt 7
>ipu-miR-200a MIMAT0029453 Ictalurus punctatus miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>ipu-miR-141 MIMAT0029418 Ictalurus punctatus miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>gga-miR-7444-3p MIMAT0029043 Gallus gallus miR-7444-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 taacact 7
         |||||||
Sbjct: 7 taacact 1
>oan-miR-7436-5p MIMAT0029026 Ornithorhynchus anatinus
         miR-7436-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 7 aacactt 1
>ccr-miR-200a MIMAT0026258 Cyprinus carpio miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>ggo-miR-200a MIMAT0024300 Gorilla gorilla miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>cgr-miR-141 MIMAT0023769 Cricetulus griseus miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>sha-miR-141 MIMAT0022826 Sarcophilus harrisii miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>sha-miR-200a MIMAT0022805 Sarcophilus harrisii miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>aca-miR-200a-3p MIMAT0021845 Anolis carolinensis miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>bdi-miR395d-3p MIMAT0020723 Brachypodium distachyon miR395d-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 7 aacactt 1
>cin-miR-4139-3p MIMAT0016737 Ciona intestinalis miR-4139-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>rno-miR-3592 MIMAT0017895 Rattus norvegicus miR-3592
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 7 aacactt 1
>ppy-miR-200a MIMAT0015796 Pongo pygmaeus miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>tgu-miR-200a-3p MIMAT0014545 Taeniopygia guttata miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>eca-miR-141 MIMAT0012970 Equus caballus miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>eca-miR-200a MIMAT0012909 Equus caballus miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mtr-miR2588b MIMAT0013259 Medicago truncatula miR2588b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mtr-miR2588a MIMAT0013258 Medicago truncatula miR2588a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>bfl-miR-200c MIMAT0009493 Branchiostoma floridae miR-200c
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>bta-miR-141 MIMAT0009232 Bos taurus miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>ptr-miR-200a MIMAT0008063 Pan troglodytes miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>ptr-miR-141 MIMAT0008036 Pan troglodytes miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mml-miR-200a-3p MIMAT0006233 Macaca mulatta miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>gma-miR1519 MIMAT0007378 Glycine max miR1519
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 8 aacactt 2
>csa-miR-141 MIMAT0006129 Ciona savignyi miR-141
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>cin-miR-141-3p MIMAT0006103 Ciona intestinalis miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>oan-miR-200a-3p MIMAT0006936 Ornithorhynchus anatinus
         miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mdo-miR-200a-3p MIMAT0004158 Monodelphis domestica miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mdo-miR-141-3p MIMAT0004151 Monodelphis domestica miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>sme-miR-87a-5p MIMAT0012109 Schmidtea mediterranea miR-87a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 aacactt 8
         |||||||
Sbjct: 1 aacactt 7
>bta-miR-200a MIMAT0003822 Bos taurus miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>xtr-miR-200a MIMAT0003693 Xenopus tropicalis miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>tni-miR-200a MIMAT0002982 Tetraodon nigroviridis miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>fru-miR-200a MIMAT0002981 Fugu rubripes miR-200a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>dre-miR-200a-3p MIMAT0001861 Danio rerio miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>dre-miR-141-3p MIMAT0001837 Danio rerio miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>gga-miR-200a-3p MIMAT0001171 Gallus gallus miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>rno-miR-200a-3p MIMAT0000874 Rattus norvegicus miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>rno-miR-141-3p MIMAT0000846 Rattus norvegicus miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>hsa-miR-200a-3p MIMAT0000682 Homo sapiens miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mmu-miR-200a-3p MIMAT0000519 Mus musculus miR-200a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>hsa-miR-141-3p MIMAT0000432 Homo sapiens miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
>mmu-miR-141-3p MIMAT0000153 Mus musculus miR-141-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 taacact 7
         |||||||
Sbjct: 1 taacact 7
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 269
Number of extensions: 201
Number of successful extensions: 176
Number of sequences better than 100.0: 67
Number of HSP's gapped: 176
Number of HSP's successfully gapped: 67
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space:   573248
Effective search space used:   573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)