BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ohv2-miR-17-22
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ppe-miR6296 MIMAT0027332 Prunus persica miR6296 14 20
gga-miR-1665 MIMAT0007548 Gallus gallus miR-1665 14 20
ata-miR5200-5p MIMAT0037138 Aegilops tauschii miR5200-5p 12 80
oha-miR-124-4-3p MIMAT0036671 Ophiophagus hannah miR-124-4-3p 12 80
oha-miR-124-3p MIMAT0036670 Ophiophagus hannah miR-124-3p 12 80
oha-miR-124 MIMAT0036668 Ophiophagus hannah miR-124 12 80
chi-miR-124a MIMAT0035922 Capra hircus miR-124a 12 80
bdi-miR5200b-5p MIMAT0035546 Brachypodium distachyon miR5200b-5p 12 80
bdi-miR5200a-5p MIMAT0035544 Brachypodium distachyon miR5200a-5p 12 80
gsa-miR-124b-3p MIMAT0035293 Gyrodactylus salaris miR-124b-3p 12 80
gsa-miR-124a-3p MIMAT0035275 Gyrodactylus salaris miR-124a-3p 12 80
efu-miR-9321 MIMAT0035018 Eptesicus fuscus miR-9321 12 80
str-miR-8395-3p MIMAT0033481 Strongyloides ratti miR-8395-3p 12 80
str-miR-124-3p MIMAT0033439 Strongyloides ratti miR-124-3p 12 80
str-miR-8370-3p MIMAT0033361 Strongyloides ratti miR-8370-3p 12 80
ppc-miR-8249-3p MIMAT0032963 Pristionchus pacificus miR-8249-3p 12 80
bbe-miR-124-3p MIMAT0031578 Branchiostoma belcheri miR-124-3p 12 80
mmu-miR-1668 MIMAT0031414 Mus musculus miR-1668 12 80
prd-miR-124-3p MIMAT0030787 Panagrellus redivivus miR-124-3p 12 80
bdi-miR7745-5p MIMAT0030230 Brachypodium distachyon miR7745-5p 12 80
lva-miR-124-3p MIMAT0032204 Lytechinus variegatus miR-124-3p 12 80
pmi-miR-124-3p MIMAT0032157 Patiria miniata miR-124-3p 12 80
cbn-miR-124 MIMAT0029752 Caenorhabditis brenneri miR-124 12 80
crm-miR-124b MIMAT0029644 Caenorhabditis remanei miR-124b 12 80
cbr-miR-124c MIMAT0029608 Caenorhabditis briggsae miR-124c 12 80
cbr-miR-124b MIMAT0029607 Caenorhabditis briggsae miR-124b 12 80
ipu-miR-124a MIMAT0029396 Ictalurus punctatus miR-124a 12 80
sbi-miR6220-3p MIMAT0026405 Sorghum bicolor miR6220-3p 12 80
mmu-miR-7074-3p MIMAT0028055 Mus musculus miR-7074-3p 12 80
mmu-miR-7034-3p MIMAT0027973 Mus musculus miR-7034-3p 12 80
hsa-miR-6768-3p MIMAT0027437 Homo sapiens miR-6768-3p 12 80
pol-miR-124-3p MIMAT0025431 Paralichthys olivaceus miR-124-3p 12 80
mmu-miR-6396 MIMAT0025147 Mus musculus miR-6396 12 80
sma-miR-124a-3p MIMAT0025026 Schistosoma mansoni miR-124a-3p 12 80
hme-miR-124 MIMAT0024937 Heliconius melpomene miR-124 12 80
mse-miR-124 MIMAT0024474 Manduca sexta miR-124 12 80
cgr-miR-124 MIMAT0023740 Cricetulus griseus miR-124 12 80
hco-miR-124 MIMAT0023338 Haemonchus contortus miR-124 12 80
ola-miR-124-3p MIMAT0022573 Oryzias latipes miR-124-3p 12 80
tur-miR-124-3p MIMAT0023089 Tetranychus urticae miR-124-3p 12 80
aca-miR-124b MIMAT0021726 Anolis carolinensis miR-124b 12 80
aca-miR-124a MIMAT0021725 Anolis carolinensis miR-124a 12 80
asu-miR-124-3p MIMAT0021496 Ascaris suum miR-124-3p 12 80
rmi-miR-5319 MIMAT0021392 Rhipicephalus microplus miR-5319 12 80
emu-miR-124b MIMAT0020267 Echinococcus multilocularis miR-124b 12 80
emu-miR-124a MIMAT0020266 Echinococcus multilocularis miR-124a 12 80
egr-miR-124b-3p MIMAT0020242 Echinococcus granulosus miR-124b-3p 12 80
egr-miR-124a MIMAT0020240 Echinococcus granulosus miR-124a 12 80
xbo-miR-124 MIMAT0020120 Xenoturbella bocki miR-124 12 80
hsa-miR-1245b-5p MIMAT0019950 Homo sapiens miR-1245b-5p 12 80
hsa-miR-4747-3p MIMAT0019883 Homo sapiens miR-4747-3p 12 80
pma-miR-124-3p MIMAT0019445 Petromyzon marinus miR-124-3p 12 80
hsa-miR-4493 MIMAT0019028 Homo sapiens miR-4493 12 80
hsa-miR-3922-5p MIMAT0019227 Homo sapiens miR-3922-5p 12 80
tca-miR-193-5p MIMAT0018896 Tribolium castaneum miR-193-5p 12 80
hsa-miR-4312 MIMAT0016864 Homo sapiens miR-4312 12 80
sja-miR-124-3p MIMAT0016263 Schistosoma japonicum miR-124-3p 12 80
ppy-miR-506 MIMAT0015929 Pongo pygmaeus miR-506 12 80
ppy-miR-124 MIMAT0015747 Pongo pygmaeus miR-124 12 80
nvi-miR-124 MIMAT0015688 Nasonia vitripennis miR-124 12 80
bmo-miR-3289 MIMAT0015476 Bombyx mori miR-3289 12 80
hsa-miR-3142 MIMAT0015011 Homo sapiens miR-3142 12 80
api-miR-124 MIMAT0014712 Acyrthosiphon pisum miR-124 12 80
tgu-miR-124-3p MIMAT0014507 Taeniopygia guttata miR-124-3p 12 80
cqu-miR-124 MIMAT0014360 Culex quinquefasciatus miR-124 12 80
aae-miR-124 MIMAT0014282 Aedes aegypti miR-124 12 80
bma-miR-124 MIMAT0014116 Brugia malayi miR-124 12 80
eca-miR-124 MIMAT0012906 Equus caballus miR-124 12 80
isc-miR-124 MIMAT0012685 Ixodes scapularis miR-124 12 80
dpu-miR-124 MIMAT0012639 Daphnia pulex miR-124 12 80
ppc-miR-124 MIMAT0011645 Pristionchus pacificus miR-124 12 80
crm-miR-124a MIMAT0011541 Caenorhabditis remanei miR-124a 12 80
sme-miR-124e-3p MIMAT0011239 Schmidtea mediterranea miR-124e-3p 12 80
sme-miR-124d-3p MIMAT0011238 Schmidtea mediterranea miR-124d-3p 12 80
spu-miR-124 MIMAT0009666 Strongylocentrotus purpuratus miR-124 12 80
sko-miR-124-3p MIMAT0009625 Saccoglossus kowalevskii miR-124-3p 12 80
lgi-miR-124 MIMAT0009578 Lottia gigantea miR-124 12 80
cte-miR-124 MIMAT0009555 Capitella teleta miR-124 12 80
bfl-miR-124-3p MIMAT0009482 Branchiostoma floridae miR-124-3p 12 80
bta-miR-124b MIMAT0013774 Bos taurus miR-124b 12 80
pta-miR1314 MIMAT0009131 Pinus taeda miR1314 12 80
dya-miR-124 MIMAT0009105 Drosophila yakuba miR-124 12 80
dwi-miR-124 MIMAT0009027 Drosophila willistoni miR-124 12 80
dvi-miR-124-3p MIMAT0008939 Drosophila virilis miR-124-3p 12 80
dsi-miR-124 MIMAT0008847 Drosophila simulans miR-124 12 80
dse-miR-124 MIMAT0008839 Drosophila sechellia miR-124 12 80
dpe-miR-124 MIMAT0008731 Drosophila persimilis miR-124 12 80
dmo-miR-124 MIMAT0008688 Drosophila mojavensis miR-124 12 80
dgr-miR-124 MIMAT0008615 Drosophila grimshawi miR-124 12 80
der-miR-124 MIMAT0008547 Drosophila erecta miR-124 12 80
dan-miR-124 MIMAT0008431 Drosophila ananassae miR-124 12 80
tca-miR-124-3p MIMAT0008370 Tribolium castaneum miR-124-3p 12 80
cfa-miR-124 MIMAT0006657 Canis familiaris miR-124 12 80
gga-miR-1730-3p MIMAT0007632 Gallus gallus miR-1730-3p 12 80
csa-miR-124 MIMAT0006126 Ciona savignyi miR-124 12 80
cin-miR-124-3p MIMAT0006100 Ciona intestinalis miR-124-3p 12 80
odi-miR-124b MIMAT0006083 Oikopleura dioica miR-124b 12 80
odi-miR-124a MIMAT0006082 Oikopleura dioica miR-124a 12 80
odi-miR-1468 MIMAT0006019 Oikopleura dioica miR-1468 12 80
oan-miR-124a-1-3p MIMAT0007114 Ornithorhynchus anatinus miR-124a... 12 80
pbi-miR-506 MIMAT0005779 Pygathrix bieti miR-506 12 80
ptr-miR-506 MIMAT0005770 Pan troglodytes miR-506 12 80
mml-miR-506-3p MIMAT0005762 Macaca mulatta miR-506-3p 12 80
ssy-miR-506 MIMAT0005752 Symphalangus syndactylus miR-506 12 80
sme-miR-124c-3p MIMAT0003995 Schmidtea mediterranea miR-124c-3p 12 80
sme-miR-124b-3p MIMAT0003993 Schmidtea mediterranea miR-124b-3p 12 80
sme-miR-124a-3p MIMAT0003992 Schmidtea mediterranea miR-124a-3p 12 80
bta-miR-124a MIMAT0003811 Bos taurus miR-124a 12 80
bmo-miR-124 MIMAT0004198 Bombyx mori miR-124 12 80
mmu-miR-700-5p MIMAT0017256 Mus musculus miR-700-5p 12 80
tni-miR-124 MIMAT0002897 Tetraodon nigroviridis miR-124 12 80
fru-miR-124 MIMAT0002896 Fugu rubripes miR-124 12 80
hsa-miR-506-3p MIMAT0002878 Homo sapiens miR-506-3p 12 80
ssc-miR-124a MIMAT0002156 Sus scrofa miR-124a 12 80
dre-miR-124-3p MIMAT0001819 Danio rerio miR-124-3p 12 80
aga-miR-124 MIMAT0001499 Anopheles gambiae miR-124 12 80
ame-miR-124 MIMAT0001473 Apis mellifera miR-124 12 80
dps-miR-124 MIMAT0001229 Drosophila pseudoobscura miR-124 12 80
rno-miR-124-3p MIMAT0000828 Rattus norvegicus miR-124-3p 12 80
cbr-miR-124a MIMAT0000494 Caenorhabditis briggsae miR-124a 12 80
hsa-miR-124-3p MIMAT0000422 Homo sapiens miR-124-3p 12 80
dme-miR-124-3p MIMAT0000351 Drosophila melanogaster miR-124-3p 12 80
cel-miR-124-3p MIMAT0000282 Caenorhabditis elegans miR-124-3p 12 80
mmu-miR-124-3p MIMAT0000134 Mus musculus miR-124-3p 12 80
>ppe-miR6296 MIMAT0027332 Prunus persica miR6296
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taaggcc 7
|||||||
Sbjct: 1 taaggcc 7
>gga-miR-1665 MIMAT0007548 Gallus gallus miR-1665
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taaggcc 7
|||||||
Sbjct: 1 taaggcc 7
>ata-miR5200-5p MIMAT0037138 Aegilops tauschii miR5200-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taaggc 6
||||||
Sbjct: 8 taaggc 3
>oha-miR-124-4-3p MIMAT0036671 Ophiophagus hannah miR-124-4-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>oha-miR-124-3p MIMAT0036670 Ophiophagus hannah miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>oha-miR-124 MIMAT0036668 Ophiophagus hannah miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>chi-miR-124a MIMAT0035922 Capra hircus miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bdi-miR5200b-5p MIMAT0035546 Brachypodium distachyon
miR5200b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taaggc 6
||||||
Sbjct: 6 taaggc 1
>bdi-miR5200a-5p MIMAT0035544 Brachypodium distachyon
miR5200a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taaggc 6
||||||
Sbjct: 6 taaggc 1
>gsa-miR-124b-3p MIMAT0035293 Gyrodactylus salaris miR-124b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>gsa-miR-124a-3p MIMAT0035275 Gyrodactylus salaris miR-124a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>efu-miR-9321 MIMAT0035018 Eptesicus fuscus miR-9321
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>str-miR-8395-3p MIMAT0033481 Strongyloides ratti miR-8395-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>str-miR-124-3p MIMAT0033439 Strongyloides ratti miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>str-miR-8370-3p MIMAT0033361 Strongyloides ratti miR-8370-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ppc-miR-8249-3p MIMAT0032963 Pristionchus pacificus miR-8249-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bbe-miR-124-3p MIMAT0031578 Branchiostoma belcheri miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>mmu-miR-1668 MIMAT0031414 Mus musculus miR-1668
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 3 aaggcc 8
>prd-miR-124-3p MIMAT0030787 Panagrellus redivivus miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bdi-miR7745-5p MIMAT0030230 Brachypodium distachyon miR7745-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 3 taaggc 8
>lva-miR-124-3p MIMAT0032204 Lytechinus variegatus miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>pmi-miR-124-3p MIMAT0032157 Patiria miniata miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cbn-miR-124 MIMAT0029752 Caenorhabditis brenneri miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>crm-miR-124b MIMAT0029644 Caenorhabditis remanei miR-124b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cbr-miR-124c MIMAT0029608 Caenorhabditis briggsae miR-124c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cbr-miR-124b MIMAT0029607 Caenorhabditis briggsae miR-124b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ipu-miR-124a MIMAT0029396 Ictalurus punctatus miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sbi-miR6220-3p MIMAT0026405 Sorghum bicolor miR6220-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taaggc 6
||||||
Sbjct: 8 taaggc 3
>mmu-miR-7074-3p MIMAT0028055 Mus musculus miR-7074-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>mmu-miR-7034-3p MIMAT0027973 Mus musculus miR-7034-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>hsa-miR-6768-3p MIMAT0027437 Homo sapiens miR-6768-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 3 aaggcc 8
>pol-miR-124-3p MIMAT0025431 Paralichthys olivaceus miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>mmu-miR-6396 MIMAT0025147 Mus musculus miR-6396
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>sma-miR-124a-3p MIMAT0025026 Schistosoma mansoni miR-124a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>hme-miR-124 MIMAT0024937 Heliconius melpomene miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>mse-miR-124 MIMAT0024474 Manduca sexta miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cgr-miR-124 MIMAT0023740 Cricetulus griseus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>hco-miR-124 MIMAT0023338 Haemonchus contortus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ola-miR-124-3p MIMAT0022573 Oryzias latipes miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>tur-miR-124-3p MIMAT0023089 Tetranychus urticae miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>aca-miR-124b MIMAT0021726 Anolis carolinensis miR-124b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>aca-miR-124a MIMAT0021725 Anolis carolinensis miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>asu-miR-124-3p MIMAT0021496 Ascaris suum miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>rmi-miR-5319 MIMAT0021392 Rhipicephalus microplus miR-5319
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>emu-miR-124b MIMAT0020267 Echinococcus multilocularis miR-124b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>emu-miR-124a MIMAT0020266 Echinococcus multilocularis miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>egr-miR-124b-3p MIMAT0020242 Echinococcus granulosus
miR-124b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>egr-miR-124a MIMAT0020240 Echinococcus granulosus miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>xbo-miR-124 MIMAT0020120 Xenoturbella bocki miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>hsa-miR-1245b-5p MIMAT0019950 Homo sapiens miR-1245b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>hsa-miR-4747-3p MIMAT0019883 Homo sapiens miR-4747-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 1 aaggcc 6
>pma-miR-124-3p MIMAT0019445 Petromyzon marinus miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>hsa-miR-4493 MIMAT0019028 Homo sapiens miR-4493
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 3 aaggcc 8
>hsa-miR-3922-5p MIMAT0019227 Homo sapiens miR-3922-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 3 aaggcc 8
>tca-miR-193-5p MIMAT0018896 Tribolium castaneum miR-193-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>hsa-miR-4312 MIMAT0016864 Homo sapiens miR-4312
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 6 aaggcc 1
>sja-miR-124-3p MIMAT0016263 Schistosoma japonicum miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ppy-miR-506 MIMAT0015929 Pongo pygmaeus miR-506
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ppy-miR-124 MIMAT0015747 Pongo pygmaeus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>nvi-miR-124 MIMAT0015688 Nasonia vitripennis miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bmo-miR-3289 MIMAT0015476 Bombyx mori miR-3289
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 7 aaggcc 2
>hsa-miR-3142 MIMAT0015011 Homo sapiens miR-3142
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 1 aaggcc 6
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>api-miR-124 MIMAT0014712 Acyrthosiphon pisum miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>tgu-miR-124-3p MIMAT0014507 Taeniopygia guttata miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cqu-miR-124 MIMAT0014360 Culex quinquefasciatus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>aae-miR-124 MIMAT0014282 Aedes aegypti miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bma-miR-124 MIMAT0014116 Brugia malayi miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>eca-miR-124 MIMAT0012906 Equus caballus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>isc-miR-124 MIMAT0012685 Ixodes scapularis miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dpu-miR-124 MIMAT0012639 Daphnia pulex miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ppc-miR-124 MIMAT0011645 Pristionchus pacificus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>crm-miR-124a MIMAT0011541 Caenorhabditis remanei miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sme-miR-124e-3p MIMAT0011239 Schmidtea mediterranea miR-124e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sme-miR-124d-3p MIMAT0011238 Schmidtea mediterranea miR-124d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>spu-miR-124 MIMAT0009666 Strongylocentrotus purpuratus miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sko-miR-124-3p MIMAT0009625 Saccoglossus kowalevskii miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>lgi-miR-124 MIMAT0009578 Lottia gigantea miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cte-miR-124 MIMAT0009555 Capitella teleta miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bfl-miR-124-3p MIMAT0009482 Branchiostoma floridae miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bta-miR-124b MIMAT0013774 Bos taurus miR-124b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>pta-miR1314 MIMAT0009131 Pinus taeda miR1314
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aaggcc 7
||||||
Sbjct: 8 aaggcc 3
>dya-miR-124 MIMAT0009105 Drosophila yakuba miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dwi-miR-124 MIMAT0009027 Drosophila willistoni miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dvi-miR-124-3p MIMAT0008939 Drosophila virilis miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dsi-miR-124 MIMAT0008847 Drosophila simulans miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dse-miR-124 MIMAT0008839 Drosophila sechellia miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dpe-miR-124 MIMAT0008731 Drosophila persimilis miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dmo-miR-124 MIMAT0008688 Drosophila mojavensis miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dgr-miR-124 MIMAT0008615 Drosophila grimshawi miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>der-miR-124 MIMAT0008547 Drosophila erecta miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dan-miR-124 MIMAT0008431 Drosophila ananassae miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>tca-miR-124-3p MIMAT0008370 Tribolium castaneum miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cfa-miR-124 MIMAT0006657 Canis familiaris miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>gga-miR-1730-3p MIMAT0007632 Gallus gallus miR-1730-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aaggcc 7
||||||
Sbjct: 1 aaggcc 6
>csa-miR-124 MIMAT0006126 Ciona savignyi miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cin-miR-124-3p MIMAT0006100 Ciona intestinalis miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>odi-miR-124b MIMAT0006083 Oikopleura dioica miR-124b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>odi-miR-124a MIMAT0006082 Oikopleura dioica miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>odi-miR-1468 MIMAT0006019 Oikopleura dioica miR-1468
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>oan-miR-124a-1-3p MIMAT0007114 Ornithorhynchus anatinus
miR-124a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>pbi-miR-506 MIMAT0005779 Pygathrix bieti miR-506
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ptr-miR-506 MIMAT0005770 Pan troglodytes miR-506
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>mml-miR-506-3p MIMAT0005762 Macaca mulatta miR-506-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ssy-miR-506 MIMAT0005752 Symphalangus syndactylus miR-506
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sme-miR-124c-3p MIMAT0003995 Schmidtea mediterranea miR-124c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sme-miR-124b-3p MIMAT0003993 Schmidtea mediterranea miR-124b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>sme-miR-124a-3p MIMAT0003992 Schmidtea mediterranea miR-124a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bta-miR-124a MIMAT0003811 Bos taurus miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>bmo-miR-124 MIMAT0004198 Bombyx mori miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>mmu-miR-700-5p MIMAT0017256 Mus musculus miR-700-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>tni-miR-124 MIMAT0002897 Tetraodon nigroviridis miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>fru-miR-124 MIMAT0002896 Fugu rubripes miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>hsa-miR-506-3p MIMAT0002878 Homo sapiens miR-506-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ssc-miR-124a MIMAT0002156 Sus scrofa miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dre-miR-124-3p MIMAT0001819 Danio rerio miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>aga-miR-124 MIMAT0001499 Anopheles gambiae miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>ame-miR-124 MIMAT0001473 Apis mellifera miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dps-miR-124 MIMAT0001229 Drosophila pseudoobscura miR-124
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>rno-miR-124-3p MIMAT0000828 Rattus norvegicus miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cbr-miR-124a MIMAT0000494 Caenorhabditis briggsae miR-124a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>hsa-miR-124-3p MIMAT0000422 Homo sapiens miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>dme-miR-124-3p MIMAT0000351 Drosophila melanogaster miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>cel-miR-124-3p MIMAT0000282 Caenorhabditis elegans miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
>mmu-miR-124-3p MIMAT0000134 Mus musculus miR-124-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taaggc 6
||||||
Sbjct: 1 taaggc 6
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 153
Number of extensions: 151
Number of successful extensions: 125
Number of sequences better than 100.0: 124
Number of HSP's gapped: 125
Number of HSP's successfully gapped: 125
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
