BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rrv-miR-rr1-13-5p
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-363-3p MIMAT0036913 Ophiophagus hannah miR-363-3p 14 27
tch-miR-363-3p MIMAT0036586 Tupaia chinensis miR-363-3p 14 27
ocu-miR-367-3p MIMAT0036325 Oryctolagus cuniculus miR-367-3p 14 27
chi-miR-363-3p MIMAT0036176 Capra hircus miR-363-3p 14 27
pxy-miR-8500 MIMAT0033760 Plutella xylostella miR-8500 14 27
pxy-miR-8499a MIMAT0033709 Plutella xylostella miR-8499a 14 27
sma-miR-8422-5p MIMAT0033548 Schistosoma mansoni miR-8422-5p 14 27
ppc-miR-8227-3p MIMAT0032899 Pristionchus pacificus miR-8227-3p 14 27
bbe-miR-2076-5p MIMAT0031642 Branchiostoma belcheri miR-2076-5p 14 27
ipu-miR-363 MIMAT0029506 Ictalurus punctatus miR-363 14 27
ccr-miR-363 MIMAT0026293 Cyprinus carpio miR-363 14 27
tgu-miR-367 MIMAT0025395 Taeniopygia guttata miR-367 14 27
mse-miR-92b MIMAT0024487 Manduca sexta miR-92b 14 27
ggo-miR-363 MIMAT0024157 Gorilla gorilla miR-363 14 27
aca-miR-367 MIMAT0021949 Anolis carolinensis miR-367 14 27
aca-miR-363-3p MIMAT0021946 Anolis carolinensis miR-363-3p 14 27
dme-miR-4982-5p MIMAT0020215 Drosophila melanogaster miR-4982-5p 14 27
sko-miR-4818g-3p MIMAT0020018 Saccoglossus kowalevskii miR-4818g-3p 14 27
sko-miR-4818c MIMAT0020012 Saccoglossus kowalevskii miR-4818c 14 27
cin-miR-4177-3p MIMAT0016787 Ciona intestinalis miR-4177-3p 14 27
ppy-miR-367 MIMAT0015854 Pongo pygmaeus miR-367 14 27
ppy-miR-363 MIMAT0015852 Pongo pygmaeus miR-363 14 27
ssc-miR-363 MIMAT0015711 Sus scrofa miR-363 14 27
bmo-miR-3259 MIMAT0015443 Bombyx mori miR-3259 14 27
tgu-miR-363-3p MIMAT0014501 Taeniopygia guttata miR-363-3p 14 27
aae-miR-92b-3p MIMAT0014322 Aedes aegypti miR-92b-3p 14 27
eca-miR-363 MIMAT0013212 Equus caballus miR-363 14 27
eca-miR-367 MIMAT0012918 Equus caballus miR-367 14 27
dpu-miR-92 MIMAT0012672 Daphnia pulex miR-92 14 27
ppc-miR-2255 MIMAT0011679 Pristionchus pacificus miR-2255 14 27
ame-miR-92b MIMAT0010117 Apis mellifera miR-92b 14 27
bfl-miR-2076-5p MIMAT0010005 Branchiostoma floridae miR-2076-5p 14 27
lgi-miR-92 MIMAT0009574 Lottia gigantea miR-92 14 27
cte-miR-92b MIMAT0009521 Capitella teleta miR-92b 14 27
bmo-miR-92b MIMAT0009155 Bombyx mori miR-92b 14 27
bta-miR-367 MIMAT0009299 Bos taurus miR-367 14 27
dya-miR-92b MIMAT0009120 Drosophila yakuba miR-92b 14 27
dwi-miR-92b MIMAT0008991 Drosophila willistoni miR-92b 14 27
dvi-miR-92b-3p MIMAT0008962 Drosophila virilis miR-92b-3p 14 27
dsi-miR-92b MIMAT0008879 Drosophila simulans miR-92b 14 27
dse-miR-92b MIMAT0008774 Drosophila sechellia miR-92b 14 27
dpe-miR-92b MIMAT0008756 Drosophila persimilis miR-92b 14 27
dmo-miR-92b MIMAT0008658 Drosophila mojavensis miR-92b 14 27
dgr-miR-92b MIMAT0008624 Drosophila grimshawi miR-92b 14 27
der-miR-92b MIMAT0008543 Drosophila erecta miR-92b 14 27
dan-miR-92b MIMAT0008405 Drosophila ananassae miR-92b 14 27
ptr-miR-367 MIMAT0008118 Pan troglodytes miR-367 14 27
ptr-miR-302f MIMAT0008091 Pan troglodytes miR-302f 14 27
cfa-miR-363 MIMAT0006750 Canis familiaris miR-363 14 27
mml-miR-367 MIMAT0006292 Macaca mulatta miR-367 14 27
mml-miR-363-3p MIMAT0006290 Macaca mulatta miR-363-3p 14 27
oan-miR-1384 MIMAT0007136 Ornithorhynchus anatinus miR-1384 14 27
oan-miR-363-3p MIMAT0006860 Ornithorhynchus anatinus miR-363-3p 14 27
hsa-miR-302f MIMAT0005932 Homo sapiens miR-302f 14 27
mdo-miR-367 MIMAT0004184 Monodelphis domestica miR-367 14 27
xtr-miR-363-3p MIMAT0003702 Xenopus tropicalis miR-363-3p 14 27
xtr-miR-367 MIMAT0003638 Xenopus tropicalis miR-367 14 27
gga-miR-367 MIMAT0003369 Gallus gallus miR-367 14 27
rno-miR-363-3p MIMAT0003210 Rattus norvegicus miR-363-3p 14 27
mmu-miR-367-3p MIMAT0003181 Mus musculus miR-367-3p 14 27
dre-miR-363-3p MIMAT0001874 Danio rerio miR-363-3p 14 27
aga-miR-92b MIMAT0001528 Anopheles gambiae miR-92b 14 27
dps-miR-92b MIMAT0001227 Drosophila pseudoobscura miR-92b 14 27
hsa-miR-367-3p MIMAT0000719 Homo sapiens miR-367-3p 14 27
mmu-miR-363-3p MIMAT0000708 Mus musculus miR-363-3p 14 27
hsa-miR-363-3p MIMAT0000707 Homo sapiens miR-363-3p 14 27
dme-miR-92b-3p MIMAT0000358 Drosophila melanogaster miR-92b-3p 14 27
>oha-miR-363-3p MIMAT0036913 Ophiophagus hannah miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>tch-miR-363-3p MIMAT0036586 Tupaia chinensis miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ocu-miR-367-3p MIMAT0036325 Oryctolagus cuniculus miR-367-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>chi-miR-363-3p MIMAT0036176 Capra hircus miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>pxy-miR-8500 MIMAT0033760 Plutella xylostella miR-8500
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 aattgca 8
|||||||
Sbjct: 8 aattgca 2
>pxy-miR-8499a MIMAT0033709 Plutella xylostella miR-8499a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 aattgca 8
|||||||
Sbjct: 8 aattgca 2
>sma-miR-8422-5p MIMAT0033548 Schistosoma mansoni miR-8422-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 taattgc 7
|||||||
Sbjct: 7 taattgc 1
>ppc-miR-8227-3p MIMAT0032899 Pristionchus pacificus miR-8227-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>bbe-miR-2076-5p MIMAT0031642 Branchiostoma belcheri miR-2076-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ipu-miR-363 MIMAT0029506 Ictalurus punctatus miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ccr-miR-363 MIMAT0026293 Cyprinus carpio miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>tgu-miR-367 MIMAT0025395 Taeniopygia guttata miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>mse-miR-92b MIMAT0024487 Manduca sexta miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ggo-miR-363 MIMAT0024157 Gorilla gorilla miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>aca-miR-367 MIMAT0021949 Anolis carolinensis miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>aca-miR-363-3p MIMAT0021946 Anolis carolinensis miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dme-miR-4982-5p MIMAT0020215 Drosophila melanogaster
miR-4982-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 aattgca 8
|||||||
Sbjct: 8 aattgca 2
>sko-miR-4818g-3p MIMAT0020018 Saccoglossus kowalevskii
miR-4818g-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>sko-miR-4818c MIMAT0020012 Saccoglossus kowalevskii miR-4818c
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>cin-miR-4177-3p MIMAT0016787 Ciona intestinalis miR-4177-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taattgc 7
|||||||
Sbjct: 1 taattgc 7
>ppy-miR-367 MIMAT0015854 Pongo pygmaeus miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ppy-miR-363 MIMAT0015852 Pongo pygmaeus miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ssc-miR-363 MIMAT0015711 Sus scrofa miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>bmo-miR-3259 MIMAT0015443 Bombyx mori miR-3259
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 aattgca 8
|||||||
Sbjct: 7 aattgca 1
>tgu-miR-363-3p MIMAT0014501 Taeniopygia guttata miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>aae-miR-92b-3p MIMAT0014322 Aedes aegypti miR-92b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>eca-miR-363 MIMAT0013212 Equus caballus miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>eca-miR-367 MIMAT0012918 Equus caballus miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dpu-miR-92 MIMAT0012672 Daphnia pulex miR-92
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ppc-miR-2255 MIMAT0011679 Pristionchus pacificus miR-2255
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ame-miR-92b MIMAT0010117 Apis mellifera miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>bfl-miR-2076-5p MIMAT0010005 Branchiostoma floridae miR-2076-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>lgi-miR-92 MIMAT0009574 Lottia gigantea miR-92
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>cte-miR-92b MIMAT0009521 Capitella teleta miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>bmo-miR-92b MIMAT0009155 Bombyx mori miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>bta-miR-367 MIMAT0009299 Bos taurus miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 2 aattgca 8
>dya-miR-92b MIMAT0009120 Drosophila yakuba miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dwi-miR-92b MIMAT0008991 Drosophila willistoni miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dvi-miR-92b-3p MIMAT0008962 Drosophila virilis miR-92b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dsi-miR-92b MIMAT0008879 Drosophila simulans miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dse-miR-92b MIMAT0008774 Drosophila sechellia miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dpe-miR-92b MIMAT0008756 Drosophila persimilis miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dmo-miR-92b MIMAT0008658 Drosophila mojavensis miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dgr-miR-92b MIMAT0008624 Drosophila grimshawi miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>der-miR-92b MIMAT0008543 Drosophila erecta miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dan-miR-92b MIMAT0008405 Drosophila ananassae miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ptr-miR-367 MIMAT0008118 Pan troglodytes miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>ptr-miR-302f MIMAT0008091 Pan troglodytes miR-302f
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taattgc 7
|||||||
Sbjct: 1 taattgc 7
>cfa-miR-363 MIMAT0006750 Canis familiaris miR-363
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>mml-miR-367 MIMAT0006292 Macaca mulatta miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>mml-miR-363-3p MIMAT0006290 Macaca mulatta miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>oan-miR-1384 MIMAT0007136 Ornithorhynchus anatinus miR-1384
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 aattgca 8
|||||||
Sbjct: 7 aattgca 1
>oan-miR-363-3p MIMAT0006860 Ornithorhynchus anatinus miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>hsa-miR-302f MIMAT0005932 Homo sapiens miR-302f
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taattgc 7
|||||||
Sbjct: 1 taattgc 7
>mdo-miR-367 MIMAT0004184 Monodelphis domestica miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 2 aattgca 8
>xtr-miR-363-3p MIMAT0003702 Xenopus tropicalis miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>xtr-miR-367 MIMAT0003638 Xenopus tropicalis miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>gga-miR-367 MIMAT0003369 Gallus gallus miR-367
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>rno-miR-363-3p MIMAT0003210 Rattus norvegicus miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>mmu-miR-367-3p MIMAT0003181 Mus musculus miR-367-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dre-miR-363-3p MIMAT0001874 Danio rerio miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>aga-miR-92b MIMAT0001528 Anopheles gambiae miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dps-miR-92b MIMAT0001227 Drosophila pseudoobscura miR-92b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>hsa-miR-367-3p MIMAT0000719 Homo sapiens miR-367-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>mmu-miR-363-3p MIMAT0000708 Mus musculus miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>hsa-miR-363-3p MIMAT0000707 Homo sapiens miR-363-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
>dme-miR-92b-3p MIMAT0000358 Drosophila melanogaster miR-92b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 aattgca 8
|||||||
Sbjct: 1 aattgca 7
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 437
Number of extensions: 370
Number of successful extensions: 119
Number of sequences better than 100.0: 67
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 67
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space: 573248
Effective search space used: 573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)