BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ohv2-miR-2
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-101a-3p MIMAT0036651 Ophiophagus hannah miR-101a-3p 16 6.9
tch-miR-101 MIMAT0036507 Tupaia chinensis miR-101 16 6.9
efu-miR-101 MIMAT0034913 Eptesicus fuscus miR-101 16 6.9
ccr-miR-101b MIMAT0026197 Cyprinus carpio miR-101b 16 6.9
sha-miR-101 MIMAT0022811 Sarcophilus harrisii miR-101 16 6.9
ola-miR-101b-3p MIMAT0022606 Oryzias latipes miR-101b-3p 16 6.9
ola-miR-101a-3p MIMAT0022543 Oryzias latipes miR-101a-3p 16 6.9
tgu-miR-101-3p MIMAT0014508 Taeniopygia guttata miR-101-3p 16 6.9
gga-miR-101-3p MIMAT0001185 Gallus gallus miR-101-3p 16 6.9
mmu-miR-101b-3p MIMAT0000616 Mus musculus miR-101b-3p 16 6.9
oha-miR-199c-3p MIMAT0036794 Ophiophagus hannah miR-199c-3p 14 27
oha-miR-144-3p MIMAT0036726 Ophiophagus hannah miR-144-3p 14 27
oha-miR-101b-3p MIMAT0036653 Ophiophagus hannah miR-101b-3p 14 27
oha-let-7g-3p MIMAT0036641 Ophiophagus hannah let-7g-3p 14 27
chi-miR-144-3p MIMAT0035966 Capra hircus miR-144-3p 14 27
chi-miR-101-3p MIMAT0035900 Capra hircus miR-101-3p 14 27
efu-miR-199 MIMAT0034946 Eptesicus fuscus miR-199 14 27
ssa-miR-144-3p MIMAT0032368 Salmo salar miR-144-3p 14 27
ssa-miR-101b-3p MIMAT0032283 Salmo salar miR-101b-3p 14 27
ssa-miR-101a-3p MIMAT0032281 Salmo salar miR-101a-3p 14 27
bbe-let-7a-3p MIMAT0031569 Branchiostoma belcheri let-7a-3p 14 27
prd-miR-7945-5p MIMAT0030750 Panagrellus redivivus miR-7945-5p 14 27
prd-miR-7901-3p MIMAT0030601 Panagrellus redivivus miR-7901-3p 14 27
ipu-miR-7556 MIMAT0029552 Ictalurus punctatus miR-7556 14 27
ipu-miR-144 MIMAT0029421 Ictalurus punctatus miR-144 14 27
ipu-miR-101b MIMAT0029387 Ictalurus punctatus miR-101b 14 27
ipu-miR-101a MIMAT0029386 Ictalurus punctatus miR-101a 14 27
aja-miR-144 MIMAT0031137 Artibeus jamaicensis miR-144 14 27
mdo-miR-20b-3p MIMAT0028765 Monodelphis domestica miR-20b-3p 14 27
ccr-miR-144 MIMAT0026225 Cyprinus carpio miR-144 14 27
ccr-miR-101a MIMAT0026196 Cyprinus carpio miR-101a 14 27
mmu-miR-6972-3p MIMAT0027847 Mus musculus miR-6972-3p 14 27
pol-miR-144-3p MIMAT0025437 Paralichthys olivaceus miR-144-3p 14 27
ssc-miR-144 MIMAT0025364 Sus scrofa miR-144 14 27
cgr-miR-101b-3p MIMAT0023729 Cricetulus griseus miR-101b-3p 14 27
cin-miR-5599-3p MIMAT0022322 Ciona intestinalis miR-5599-3p 14 27
aca-miR-144-3p MIMAT0021772 Anolis carolinensis miR-144-3p 14 27
aca-miR-101-3p MIMAT0021711 Anolis carolinensis miR-101-3p 14 27
tae-miR5084 MIMAT0020566 Triticum aestivum miR5084 14 27
pma-miR-144-3p MIMAT0019475 Petromyzon marinus miR-144-3p 14 27
tgu-miR-144-3p MIMAT0014596 Taeniopygia guttata miR-144-3p 14 27
eca-miR-144 MIMAT0013024 Equus caballus miR-144 14 27
eca-miR-101 MIMAT0012951 Equus caballus miR-101 14 27
bta-miR-2469 MIMAT0012059 Bos taurus miR-2469 14 27
bta-miR-2384 MIMAT0011933 Bos taurus miR-2384 14 27
bta-miR-199c MIMAT0011871 Bos taurus miR-199c 14 27
ssc-miR-101 MIMAT0010185 Sus scrofa miR-101 14 27
bfl-let-7a-3p MIMAT0019176 Branchiostoma floridae let-7a-3p 14 27
bta-miR-144 MIMAT0009234 Bos taurus miR-144 14 27
ssc-miR-199b-3p MIMAT0007760 Sus scrofa miR-199b-3p 14 27
cfa-miR-144 MIMAT0006734 Canis familiaris miR-144 14 27
cfa-miR-101 MIMAT0006600 Canis familiaris miR-101 14 27
mml-miR-144 MIMAT0006202 Macaca mulatta miR-144 14 27
mml-miR-20b-3p MIMAT0026799 Macaca mulatta miR-20b-3p 14 27
cin-miR-101 MIMAT0006099 Ciona intestinalis miR-101 14 27
oan-miR-101 MIMAT0007011 Ornithorhynchus anatinus miR-101 14 27
oan-miR-144-3p MIMAT0006903 Ornithorhynchus anatinus miR-144-3p 14 27
mdo-miR-144-3p MIMAT0004114 Monodelphis domestica miR-144-3p 14 27
mdo-miR-101-3p MIMAT0004098 Monodelphis domestica miR-101-3p 14 27
gga-miR-144-3p MIMAT0003776 Gallus gallus miR-144-3p 14 27
xtr-miR-144 MIMAT0003687 Xenopus tropicalis miR-144 14 27
xtr-miR-101a MIMAT0003662 Xenopus tropicalis miR-101a 14 27
xtr-miR-199a-3p MIMAT0003619 Xenopus tropicalis miR-199a-3p 14 27
bta-miR-101 MIMAT0003520 Bos taurus miR-101 14 27
tni-miR-101b MIMAT0003040 Tetraodon nigroviridis miR-101b 14 27
fru-miR-101b MIMAT0003039 Fugu rubripes miR-101b 14 27
tni-miR-144 MIMAT0003021 Tetraodon nigroviridis miR-144 14 27
fru-miR-144 MIMAT0003020 Fugu rubripes miR-144 14 27
tni-miR-101a MIMAT0002903 Tetraodon nigroviridis miR-101a 14 27
fru-miR-101a MIMAT0002902 Fugu rubripes miR-101a 14 27
mne-miR-101 MIMAT0002433 Macaca nemestrina miR-101 14 27
lla-miR-101 MIMAT0002432 Lagothrix lagotricha miR-101 14 27
mml-miR-101-3p MIMAT0002431 Macaca mulatta miR-101-3p 14 27
ptr-miR-101 MIMAT0002430 Pan troglodytes miR-101 14 27
ppy-miR-101 MIMAT0002429 Pongo pygmaeus miR-101 14 27
ppa-miR-101 MIMAT0002428 Pan paniscus miR-101 14 27
age-miR-101 MIMAT0002427 Ateles geoffroyi miR-101 14 27
sla-miR-101 MIMAT0002426 Saguinus labiatus miR-101 14 27
ggo-miR-101 MIMAT0002425 Gorilla gorilla miR-101 14 27
ppa-miR-144 MIMAT0002265 Pan paniscus miR-144 14 27
mne-miR-144 MIMAT0002264 Macaca nemestrina miR-144 14 27
ppy-miR-144 MIMAT0002263 Pongo pygmaeus miR-144 14 27
ptr-miR-144 MIMAT0002262 Pan troglodytes miR-144 14 27
dre-miR-144-3p MIMAT0001841 Danio rerio miR-144-3p 14 27
dre-miR-101b MIMAT0001815 Danio rerio miR-101b 14 27
dre-miR-101a MIMAT0001814 Danio rerio miR-101a 14 27
dre-miR-199-3p MIMAT0003155 Danio rerio miR-199-3p 14 27
gga-miR-199-3p MIMAT0003721 Gallus gallus miR-199-3p 14 27
rno-miR-144-3p MIMAT0000850 Rattus norvegicus miR-144-3p 14 27
rno-miR-101a-3p MIMAT0000823 Rattus norvegicus miR-101a-3p 14 27
rno-miR-101b-3p MIMAT0000615 Rattus norvegicus miR-101b-3p 14 27
hsa-miR-144-3p MIMAT0000436 Homo sapiens miR-144-3p 14 27
mmu-miR-144-3p MIMAT0000156 Mus musculus miR-144-3p 14 27
mmu-miR-101a-3p MIMAT0000133 Mus musculus miR-101a-3p 14 27
mmu-let-7g-3p MIMAT0004519 Mus musculus let-7g-3p 14 27
hsa-miR-101-3p MIMAT0000099 Homo sapiens miR-101-3p 14 27
>oha-miR-101a-3p MIMAT0036651 Ophiophagus hannah miR-101a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>tch-miR-101 MIMAT0036507 Tupaia chinensis miR-101
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>efu-miR-101 MIMAT0034913 Eptesicus fuscus miR-101
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>ccr-miR-101b MIMAT0026197 Cyprinus carpio miR-101b
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>sha-miR-101 MIMAT0022811 Sarcophilus harrisii miR-101
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>ola-miR-101b-3p MIMAT0022606 Oryzias latipes miR-101b-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>ola-miR-101a-3p MIMAT0022543 Oryzias latipes miR-101a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>tgu-miR-101-3p MIMAT0014508 Taeniopygia guttata miR-101-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>gga-miR-101-3p MIMAT0001185 Gallus gallus miR-101-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>mmu-miR-101b-3p MIMAT0000616 Mus musculus miR-101b-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Minus
Query: 1 tactgtac 8
||||||||
Sbjct: 8 tactgtac 1
>oha-miR-199c-3p MIMAT0036794 Ophiophagus hannah miR-199c-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>oha-miR-144-3p MIMAT0036726 Ophiophagus hannah miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>oha-miR-101b-3p MIMAT0036653 Ophiophagus hannah miR-101b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>oha-let-7g-3p MIMAT0036641 Ophiophagus hannah let-7g-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actgtac 8
|||||||
Sbjct: 1 actgtac 7
>chi-miR-144-3p MIMAT0035966 Capra hircus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>chi-miR-101-3p MIMAT0035900 Capra hircus miR-101-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>efu-miR-199 MIMAT0034946 Eptesicus fuscus miR-199
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ssa-miR-144-3p MIMAT0032368 Salmo salar miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 8 tactgta 2
>ssa-miR-101b-3p MIMAT0032283 Salmo salar miR-101b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ssa-miR-101a-3p MIMAT0032281 Salmo salar miR-101a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>bbe-let-7a-3p MIMAT0031569 Branchiostoma belcheri let-7a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actgtac 8
|||||||
Sbjct: 2 actgtac 8
>prd-miR-7945-5p MIMAT0030750 Panagrellus redivivus miR-7945-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgta 7
|||||||
Sbjct: 1 tactgta 7
>prd-miR-7901-3p MIMAT0030601 Panagrellus redivivus miR-7901-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgta 7
|||||||
Sbjct: 1 tactgta 7
>ipu-miR-7556 MIMAT0029552 Ictalurus punctatus miR-7556
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ipu-miR-144 MIMAT0029421 Ictalurus punctatus miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 8 tactgta 2
>ipu-miR-101b MIMAT0029387 Ictalurus punctatus miR-101b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ipu-miR-101a MIMAT0029386 Ictalurus punctatus miR-101a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>aja-miR-144 MIMAT0031137 Artibeus jamaicensis miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mdo-miR-20b-3p MIMAT0028765 Monodelphis domestica miR-20b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actgtac 8
|||||||
Sbjct: 1 actgtac 7
>ccr-miR-144 MIMAT0026225 Cyprinus carpio miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 8 tactgta 2
>ccr-miR-101a MIMAT0026196 Cyprinus carpio miR-101a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mmu-miR-6972-3p MIMAT0027847 Mus musculus miR-6972-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgta 7
|||||||
Sbjct: 2 tactgta 8
>pol-miR-144-3p MIMAT0025437 Paralichthys olivaceus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ssc-miR-144 MIMAT0025364 Sus scrofa miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>cgr-miR-101b-3p MIMAT0023729 Cricetulus griseus miR-101b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>cin-miR-5599-3p MIMAT0022322 Ciona intestinalis miR-5599-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>aca-miR-144-3p MIMAT0021772 Anolis carolinensis miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>aca-miR-101-3p MIMAT0021711 Anolis carolinensis miR-101-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>tae-miR5084 MIMAT0020566 Triticum aestivum miR5084
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 8 tactgta 2
>pma-miR-144-3p MIMAT0019475 Petromyzon marinus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>tgu-miR-144-3p MIMAT0014596 Taeniopygia guttata miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>eca-miR-144 MIMAT0013024 Equus caballus miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>eca-miR-101 MIMAT0012951 Equus caballus miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>bta-miR-2469 MIMAT0012059 Bos taurus miR-2469
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgta 7
|||||||
Sbjct: 2 tactgta 8
>bta-miR-2384 MIMAT0011933 Bos taurus miR-2384
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actgtac 8
|||||||
Sbjct: 2 actgtac 8
>bta-miR-199c MIMAT0011871 Bos taurus miR-199c
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ssc-miR-101 MIMAT0010185 Sus scrofa miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>bfl-let-7a-3p MIMAT0019176 Branchiostoma floridae let-7a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actgtac 8
|||||||
Sbjct: 2 actgtac 8
>bta-miR-144 MIMAT0009234 Bos taurus miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ssc-miR-199b-3p MIMAT0007760 Sus scrofa miR-199b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>cfa-miR-144 MIMAT0006734 Canis familiaris miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>cfa-miR-101 MIMAT0006600 Canis familiaris miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mml-miR-144 MIMAT0006202 Macaca mulatta miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mml-miR-20b-3p MIMAT0026799 Macaca mulatta miR-20b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgta 7
|||||||
Sbjct: 1 tactgta 7
>cin-miR-101 MIMAT0006099 Ciona intestinalis miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>oan-miR-101 MIMAT0007011 Ornithorhynchus anatinus miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>oan-miR-144-3p MIMAT0006903 Ornithorhynchus anatinus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mdo-miR-144-3p MIMAT0004114 Monodelphis domestica miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mdo-miR-101-3p MIMAT0004098 Monodelphis domestica miR-101-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>gga-miR-144-3p MIMAT0003776 Gallus gallus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 8 tactgta 2
>xtr-miR-144 MIMAT0003687 Xenopus tropicalis miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>xtr-miR-101a MIMAT0003662 Xenopus tropicalis miR-101a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>xtr-miR-199a-3p MIMAT0003619 Xenopus tropicalis miR-199a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>bta-miR-101 MIMAT0003520 Bos taurus miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>tni-miR-101b MIMAT0003040 Tetraodon nigroviridis miR-101b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>fru-miR-101b MIMAT0003039 Fugu rubripes miR-101b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>tni-miR-144 MIMAT0003021 Tetraodon nigroviridis miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>fru-miR-144 MIMAT0003020 Fugu rubripes miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>tni-miR-101a MIMAT0002903 Tetraodon nigroviridis miR-101a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>fru-miR-101a MIMAT0002902 Fugu rubripes miR-101a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mne-miR-101 MIMAT0002433 Macaca nemestrina miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>lla-miR-101 MIMAT0002432 Lagothrix lagotricha miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mml-miR-101-3p MIMAT0002431 Macaca mulatta miR-101-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ptr-miR-101 MIMAT0002430 Pan troglodytes miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ppy-miR-101 MIMAT0002429 Pongo pygmaeus miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ppa-miR-101 MIMAT0002428 Pan paniscus miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>age-miR-101 MIMAT0002427 Ateles geoffroyi miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>sla-miR-101 MIMAT0002426 Saguinus labiatus miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ggo-miR-101 MIMAT0002425 Gorilla gorilla miR-101
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ppa-miR-144 MIMAT0002265 Pan paniscus miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mne-miR-144 MIMAT0002264 Macaca nemestrina miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ppy-miR-144 MIMAT0002263 Pongo pygmaeus miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>ptr-miR-144 MIMAT0002262 Pan troglodytes miR-144
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>dre-miR-144-3p MIMAT0001841 Danio rerio miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>dre-miR-101b MIMAT0001815 Danio rerio miR-101b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>dre-miR-101a MIMAT0001814 Danio rerio miR-101a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>dre-miR-199-3p MIMAT0003155 Danio rerio miR-199-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>gga-miR-199-3p MIMAT0003721 Gallus gallus miR-199-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>rno-miR-144-3p MIMAT0000850 Rattus norvegicus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>rno-miR-101a-3p MIMAT0000823 Rattus norvegicus miR-101a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>rno-miR-101b-3p MIMAT0000615 Rattus norvegicus miR-101b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>hsa-miR-144-3p MIMAT0000436 Homo sapiens miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mmu-miR-144-3p MIMAT0000156 Mus musculus miR-144-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mmu-miR-101a-3p MIMAT0000133 Mus musculus miR-101a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
>mmu-let-7g-3p MIMAT0004519 Mus musculus let-7g-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actgtac 8
|||||||
Sbjct: 1 actgtac 7
>hsa-miR-101-3p MIMAT0000099 Homo sapiens miR-101-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgta 7
|||||||
Sbjct: 7 tactgta 1
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 420
Number of extensions: 314
Number of successful extensions: 283
Number of sequences better than 100.0: 96
Number of HSP's gapped: 283
Number of HSP's successfully gapped: 96
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space: 573248
Effective search space used: 573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)
