BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= hsv2-miR-h11
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
chi-miR-1197-3p MIMAT0035917 Capra hircus miR-1197-3p 14 20
ggo-miR-676 MIMAT0024273 Gorilla gorilla miR-676 14 20
ggo-miR-1197 MIMAT0024245 Gorilla gorilla miR-1197 14 20
ptr-miR-676 MIMAT0024049 Pan troglodytes miR-676 14 20
oar-miR-1197-3p MIMAT0019258 Ovis aries miR-1197-3p 14 20
hsa-miR-676-3p MIMAT0018204 Homo sapiens miR-676-3p 14 20
ppy-miR-1197 MIMAT0016149 Pongo pygmaeus miR-1197 14 20
hsv2-miR-H11-3p MIMAT0014698 Herpes Simplex miR-H11-3p 14 20
hsv1-miR-H11 MIMAT0014688 Herpes Simplex miR-H11 14 20
eca-miR-1197 MIMAT0013125 Equus caballus miR-1197 14 20
bta-miR-1197 MIMAT0009966 Bos taurus miR-1197 14 20
ptr-miR-1197 MIMAT0007954 Pan troglodytes miR-1197 14 20
hsa-miR-1197 MIMAT0005955 Homo sapiens miR-1197 14 20
mmu-miR-1197-3p MIMAT0005858 Mus musculus miR-1197-3p 14 20
mdv2-miR-M17-3p MIMAT0004457 Mareks disease miR-M17-3p 14 20
gsa-miR-71c-5p MIMAT0035320 Gyrodactylus salaris miR-71c-5p 12 80
efu-miR-9189b MIMAT0034889 Eptesicus fuscus miR-9189b 12 80
efu-miR-9249 MIMAT0034866 Eptesicus fuscus miR-9249 12 80
efu-miR-9225 MIMAT0034827 Eptesicus fuscus miR-9225 12 80
eca-miR-676 MIMAT0034705 Equus caballus miR-676 12 80
eca-miR-9040 MIMAT0034582 Equus caballus miR-9040 12 80
cfa-miR-8900 MIMAT0034410 Canis familiaris miR-8900 12 80
cfa-miR-8898 MIMAT0034408 Canis familiaris miR-8898 12 80
cel-miR-8207-5p MIMAT0032831 Caenorhabditis elegans miR-8207-5p 12 80
hsa-miR-8080 MIMAT0031007 Homo sapiens miR-8080 12 80
prd-miR-7957c-5p MIMAT0030822 Panagrellus redivivus miR-7957c-5p 12 80
ptc-miR7827 MIMAT0030403 Populus trichocarpa miR7827 12 80
oan-miR-7432-3p MIMAT0029015 Ornithorhynchus anatinus miR-7432-3p 12 80
mml-miR-7177-5p MIMAT0028298 Macaca mulatta miR-7177-5p 12 80
mml-miR-7175-5p MIMAT0028290 Macaca mulatta miR-7175-5p 12 80
bma-miR-5881b MIMAT0026383 Brugia malayi miR-5881b 12 80
mmu-miR-7117-3p MIMAT0028132 Mus musculus miR-7117-3p 12 80
mmu-miR-6948-3p MIMAT0027797 Mus musculus miR-6948-3p 12 80
mmu-miR-6899-3p MIMAT0027699 Mus musculus miR-6899-3p 12 80
hsa-miR-6852-3p MIMAT0027605 Homo sapiens miR-6852-3p 12 80
gga-miR-6671-5p MIMAT0025773 Gallus gallus miR-6671-5p 12 80
gga-miR-6614-3p MIMAT0025709 Gallus gallus miR-6614-3p 12 80
nta-miR6153 MIMAT0024754 Nicotiana tabacum miR6153 12 80
ppy-miR-676 MIMAT0024365 Pongo pygmaeus miR-676 12 80
mml-miR-676-3p MIMAT0024325 Macaca mulatta miR-676-3p 12 80
hco-miR-5890b-5p MIMAT0023370 Haemonchus contortus miR-5890b-5p 12 80
hsa-miR-5571-3p MIMAT0022258 Homo sapiens miR-5571-3p 12 80
aca-miR-5433 MIMAT0022054 Anolis carolinensis miR-5433 12 80
asu-miR-236-5p MIMAT0021505 Ascaris suum miR-236-5p 12 80
hsa-miR-5004-5p MIMAT0021027 Homo sapiens miR-5004-5p 12 80
hsa-miR-5000-3p MIMAT0021020 Homo sapiens miR-5000-3p 12 80
bfl-miR-4898 MIMAT0020490 Branchiostoma floridae miR-4898 12 80
hsa-miR-4759 MIMAT0019905 Homo sapiens miR-4759 12 80
pma-miR-26a-1-3p MIMAT0019409 Petromyzon marinus miR-26a-1-3p 12 80
hsa-miR-4436a MIMAT0018952 Homo sapiens miR-4436a 12 80
hsa-miR-3909 MIMAT0018183 Homo sapiens miR-3909 12 80
ame-miR-3786 MIMAT0018565 Apis mellifera miR-3786 12 80
hsa-miR-2355-3p MIMAT0017950 Homo sapiens miR-2355-3p 12 80
rno-miR-3569 MIMAT0017849 Rattus norvegicus miR-3569 12 80
hsa-miR-3169 MIMAT0015044 Homo sapiens miR-3169 12 80
ssc-miR-676-3p MIMAT0013943 Sus scrofa miR-676-3p 12 80
bmo-miR-2775b MIMAT0013745 Bombyx mori miR-2775b 12 80
bta-miR-2441 MIMAT0012016 Bos taurus miR-2441 12 80
bta-miR-2355-3p MIMAT0011892 Bos taurus miR-2355-3p 12 80
oan-miR-26-1-3p MIMAT0006992 Ornithorhynchus anatinus miR-26-1-3p 12 80
mmu-miR-877-3p MIMAT0004862 Mus musculus miR-877-3p 12 80
osa-miR169f.2 MIMAT0020916 Oryza sativa miR169f.2 12 80
>chi-miR-1197-3p MIMAT0035917 Capra hircus miR-1197-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>ggo-miR-676 MIMAT0024273 Gorilla gorilla miR-676
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 taggaca 7
|||||||
Sbjct: 8 taggaca 2
>ggo-miR-1197 MIMAT0024245 Gorilla gorilla miR-1197
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>ptr-miR-676 MIMAT0024049 Pan troglodytes miR-676
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 taggaca 7
|||||||
Sbjct: 8 taggaca 2
>oar-miR-1197-3p MIMAT0019258 Ovis aries miR-1197-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>hsa-miR-676-3p MIMAT0018204 Homo sapiens miR-676-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 taggaca 7
|||||||
Sbjct: 8 taggaca 2
>ppy-miR-1197 MIMAT0016149 Pongo pygmaeus miR-1197
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>hsv2-miR-H11-3p MIMAT0014698 Herpes Simplex miR-H11-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 2 taggaca 8
>hsv1-miR-H11 MIMAT0014688 Herpes Simplex miR-H11
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 2 taggaca 8
>eca-miR-1197 MIMAT0013125 Equus caballus miR-1197
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>bta-miR-1197 MIMAT0009966 Bos taurus miR-1197
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>ptr-miR-1197 MIMAT0007954 Pan troglodytes miR-1197
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>hsa-miR-1197 MIMAT0005955 Homo sapiens miR-1197
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>mmu-miR-1197-3p MIMAT0005858 Mus musculus miR-1197-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>mdv2-miR-M17-3p MIMAT0004457 Mareks disease miR-M17-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 taggaca 7
|||||||
Sbjct: 1 taggaca 7
>gsa-miR-71c-5p MIMAT0035320 Gyrodactylus salaris miR-71c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>efu-miR-9189b MIMAT0034889 Eptesicus fuscus miR-9189b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>efu-miR-9249 MIMAT0034866 Eptesicus fuscus miR-9249
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>efu-miR-9225 MIMAT0034827 Eptesicus fuscus miR-9225
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 1 aggaca 6
>eca-miR-676 MIMAT0034705 Equus caballus miR-676
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taggac 6
||||||
Sbjct: 8 taggac 3
>eca-miR-9040 MIMAT0034582 Equus caballus miR-9040
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>cfa-miR-8900 MIMAT0034410 Canis familiaris miR-8900
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 1 taggac 6
>cfa-miR-8898 MIMAT0034408 Canis familiaris miR-8898
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>cel-miR-8207-5p MIMAT0032831 Caenorhabditis elegans miR-8207-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 7 aggaca 2
>hsa-miR-8080 MIMAT0031007 Homo sapiens miR-8080
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>prd-miR-7957c-5p MIMAT0030822 Panagrellus redivivus
miR-7957c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>ptc-miR7827 MIMAT0030403 Populus trichocarpa miR7827
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 3 taggac 8
>oan-miR-7432-3p MIMAT0029015 Ornithorhynchus anatinus
miR-7432-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 1 aggaca 6
>mml-miR-7177-5p MIMAT0028298 Macaca mulatta miR-7177-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>mml-miR-7175-5p MIMAT0028290 Macaca mulatta miR-7175-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 1 aggaca 6
>bma-miR-5881b MIMAT0026383 Brugia malayi miR-5881b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 1 aggaca 6
>mmu-miR-7117-3p MIMAT0028132 Mus musculus miR-7117-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>mmu-miR-6948-3p MIMAT0027797 Mus musculus miR-6948-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>mmu-miR-6899-3p MIMAT0027699 Mus musculus miR-6899-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 7 aggaca 2
>hsa-miR-6852-3p MIMAT0027605 Homo sapiens miR-6852-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>gga-miR-6671-5p MIMAT0025773 Gallus gallus miR-6671-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>gga-miR-6614-3p MIMAT0025709 Gallus gallus miR-6614-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>nta-miR6153 MIMAT0024754 Nicotiana tabacum miR6153
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 1 taggac 6
>ppy-miR-676 MIMAT0024365 Pongo pygmaeus miR-676
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taggac 6
||||||
Sbjct: 8 taggac 3
>mml-miR-676-3p MIMAT0024325 Macaca mulatta miR-676-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taggac 6
||||||
Sbjct: 8 taggac 3
>hco-miR-5890b-5p MIMAT0023370 Haemonchus contortus miR-5890b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 3 taggac 8
>hsa-miR-5571-3p MIMAT0022258 Homo sapiens miR-5571-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taggac 6
||||||
Sbjct: 6 taggac 1
>aca-miR-5433 MIMAT0022054 Anolis carolinensis miR-5433
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 3 taggac 8
>asu-miR-236-5p MIMAT0021505 Ascaris suum miR-236-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taggac 6
||||||
Sbjct: 6 taggac 1
>hsa-miR-5004-5p MIMAT0021027 Homo sapiens miR-5004-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>hsa-miR-5000-3p MIMAT0021020 Homo sapiens miR-5000-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>bfl-miR-4898 MIMAT0020490 Branchiostoma floridae miR-4898
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>hsa-miR-4759 MIMAT0019905 Homo sapiens miR-4759
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 1 taggac 6
>pma-miR-26a-1-3p MIMAT0019409 Petromyzon marinus miR-26a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>hsa-miR-4436a MIMAT0018952 Homo sapiens miR-4436a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>hsa-miR-3909 MIMAT0018183 Homo sapiens miR-3909
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>ame-miR-3786 MIMAT0018565 Apis mellifera miR-3786
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>hsa-miR-2355-3p MIMAT0017950 Homo sapiens miR-2355-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>rno-miR-3569 MIMAT0017849 Rattus norvegicus miR-3569
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>hsa-miR-3169 MIMAT0015044 Homo sapiens miR-3169
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 1 taggac 6
>ssc-miR-676-3p MIMAT0013943 Sus scrofa miR-676-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 taggac 6
||||||
Sbjct: 8 taggac 3
>bmo-miR-2775b MIMAT0013745 Bombyx mori miR-2775b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 taggac 6
||||||
Sbjct: 3 taggac 8
>bta-miR-2441 MIMAT0012016 Bos taurus miR-2441
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
>bta-miR-2355-3p MIMAT0011892 Bos taurus miR-2355-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>oan-miR-26-1-3p MIMAT0006992 Ornithorhynchus anatinus
miR-26-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 8 aggaca 3
>mmu-miR-877-3p MIMAT0004862 Mus musculus miR-877-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aggaca 7
||||||
Sbjct: 6 aggaca 1
>osa-miR169f.2 MIMAT0020916 Oryza sativa miR169f.2
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aggaca 7
||||||
Sbjct: 3 aggaca 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 96
Number of extensions: 81
Number of successful extensions: 62
Number of sequences better than 100.0: 62
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 62
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
