BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= kshv-miR-k10a_ 1_5
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tch-miR-142 MIMAT0036470 Tupaia chinensis miR-142 14 20
ppc-miR-8299-5p MIMAT0033115 Pristionchus pacificus miR-8299-5p 14 20
ipu-miR-142 MIMAT0029419 Ictalurus punctatus miR-142 14 20
ccr-miR-142-3p MIMAT0026223 Cyprinus carpio miR-142-3p 14 20
gga-miR-6553-3p MIMAT0025614 Gallus gallus miR-6553-3p 14 20
mmu-miR-6360 MIMAT0025103 Mus musculus miR-6360 14 20
cgr-miR-142-3p MIMAT0023771 Cricetulus griseus miR-142-3p 14 20
gma-miR5785 MIMAT0023191 Glycine max miR5785 14 20
tgu-miR-142-3p MIMAT0026999 Taeniopygia guttata miR-142-3p 14 20
tgu-miR-338-5p MIMAT0017389 Taeniopygia guttata miR-338-5p 14 20
kshv-miR-K12-10a-3p MIMAT0002179 Kaposi sarcoma-associated miR-K... 14 20
ata-miR2275c-5p MIMAT0037226 Aegilops tauschii miR2275c-5p 12 80
ata-miR395b-3p MIMAT0037151 Aegilops tauschii miR395b-3p 12 80
ata-miR2275a-5p MIMAT0037110 Aegilops tauschii miR2275a-5p 12 80
oha-miR-200a MIMAT0036807 Ophiophagus hannah miR-200a 12 80
oha-miR-142-3p MIMAT0036722 Ophiophagus hannah miR-142-3p 12 80
tch-miR-141-3p MIMAT0036489 Tupaia chinensis miR-141-3p 12 80
tch-miR-200a-3p MIMAT0036466 Tupaia chinensis miR-200a-3p 12 80
gma-miR9746i MIMAT0036383 Glycine max miR9746i 12 80
gma-miR9746h MIMAT0036373 Glycine max miR9746h 12 80
gma-miR9746g MIMAT0036372 Glycine max miR9746g 12 80
gma-miR9746f MIMAT0036371 Glycine max miR9746f 12 80
gma-miR9746e MIMAT0036370 Glycine max miR9746e 12 80
gma-miR9746d MIMAT0036369 Glycine max miR9746d 12 80
gma-miR9746c MIMAT0036368 Glycine max miR9746c 12 80
gma-miR9746b MIMAT0036367 Glycine max miR9746b 12 80
gma-miR9746a MIMAT0036366 Glycine max miR9746a 12 80
chi-miR-505-3p MIMAT0036269 Capra hircus miR-505-3p 12 80
chi-miR-200a MIMAT0036045 Capra hircus miR-200a 12 80
chi-miR-141 MIMAT0035962 Capra hircus miR-141 12 80
efu-miR-142 MIMAT0035200 Eptesicus fuscus miR-142 12 80
efu-miR-141 MIMAT0035097 Eptesicus fuscus miR-141 12 80
efu-miR-200a MIMAT0035013 Eptesicus fuscus miR-200a 12 80
efu-miR-9215b MIMAT0034807 Eptesicus fuscus miR-9215b 12 80
efu-miR-9215a MIMAT0034806 Eptesicus fuscus miR-9215a 12 80
eca-miR-9158 MIMAT0034735 Equus caballus miR-9158 12 80
eca-miR-9004 MIMAT0034544 Equus caballus miR-9004 12 80
eca-miR-8986a MIMAT0034523 Equus caballus miR-8986a 12 80
sma-miR-8410-3p MIMAT0033525 Schistosoma mansoni miR-8410-3p 12 80
ssa-miR-200b-3p MIMAT0032480 Salmo salar miR-200b-3p 12 80
ssa-miR-142b-3p MIMAT0032364 Salmo salar miR-142b-3p 12 80
ssa-miR-142a-3p MIMAT0032362 Salmo salar miR-142a-3p 12 80
bbe-miR-200c-3p MIMAT0031610 Branchiostoma belcheri miR-200c-3p 12 80
bbe-miR-124-5p MIMAT0031577 Branchiostoma belcheri miR-124-5p 12 80
stu-miR7987 MIMAT0030860 Solanum tuberosum miR7987 12 80
prd-miR-7937-3p MIMAT0030733 Panagrellus redivivus miR-7937-3p 12 80
oar-miR-200a MIMAT0030042 Ovis aries miR-200a 12 80
ipu-miR-200a MIMAT0029453 Ictalurus punctatus miR-200a 12 80
ipu-miR-141 MIMAT0029418 Ictalurus punctatus miR-141 12 80
aja-miR-142 MIMAT0031136 Artibeus jamaicensis miR-142 12 80
gga-miR-7444-3p MIMAT0029043 Gallus gallus miR-7444-3p 12 80
oan-miR-7436-5p MIMAT0029026 Ornithorhynchus anatinus miR-7436-5p 12 80
mdo-miR-1545b-5p MIMAT0028750 Monodelphis domestica miR-1545b-5p 12 80
mdo-miR-199b-3-5p MIMAT0031066 Monodelphis domestica miR-199b-3-5p 12 80
mdo-miR-199b-2-5p MIMAT0031065 Monodelphis domestica miR-199b-2-5p 12 80
mmu-miR-7228-3p MIMAT0028425 Mus musculus miR-7228-3p 12 80
mml-miR-7168-3p MIMAT0028271 Macaca mulatta miR-7168-3p 12 80
ccr-miR-200a MIMAT0026258 Cyprinus carpio miR-200a 12 80
hsa-miR-6757-3p MIMAT0027415 Homo sapiens miR-6757-3p 12 80
ggo-miR-200a MIMAT0024300 Gorilla gorilla miR-200a 12 80
cgr-miR-141 MIMAT0023769 Cricetulus griseus miR-141 12 80
sha-miR-141 MIMAT0022826 Sarcophilus harrisii miR-141 12 80
sha-miR-200a MIMAT0022805 Sarcophilus harrisii miR-200a 12 80
ola-miR-200a MIMAT0022571 Oryzias latipes miR-200a 12 80
aca-miR-200a-3p MIMAT0021845 Anolis carolinensis miR-200a-3p 12 80
aca-miR-142-3p MIMAT0021768 Anolis carolinensis miR-142-3p 12 80
bdi-miR395d-3p MIMAT0020723 Brachypodium distachyon miR395d-3p 12 80
hsa-miR-3591-5p MIMAT0019876 Homo sapiens miR-3591-5p 12 80
pma-miR-4595 MIMAT0019628 Petromyzon marinus miR-4595 12 80
hsa-miR-3659 MIMAT0018080 Homo sapiens miR-3659 12 80
cin-miR-4139-3p MIMAT0016737 Ciona intestinalis miR-4139-3p 12 80
cin-miR-4061-3p MIMAT0016611 Ciona intestinalis miR-4061-3p 12 80
rno-miR-3587 MIMAT0017883 Rattus norvegicus miR-3587 12 80
ppy-miR-609 MIMAT0016050 Pongo pygmaeus miR-609 12 80
ppy-miR-200a MIMAT0015796 Pongo pygmaeus miR-200a 12 80
ppy-miR-142-3p MIMAT0015766 Pongo pygmaeus miR-142-3p 12 80
aly-miR840-5p MIMAT0017625 Arabidopsis lyrata miR840-5p 12 80
hsa-miR-3117-5p MIMAT0019197 Homo sapiens miR-3117-5p 12 80
tgu-miR-200a-3p MIMAT0014545 Taeniopygia guttata miR-200a-3p 12 80
ssc-miR-505 MIMAT0013961 Sus scrofa miR-505 12 80
ssc-miR-142-3p MIMAT0020362 Sus scrofa miR-142-3p 12 80
eca-miR-142-3p MIMAT0013023 Equus caballus miR-142-3p 12 80
eca-miR-141 MIMAT0012970 Equus caballus miR-141 12 80
eca-miR-200a MIMAT0012909 Equus caballus miR-200a 12 80
mtr-miR2617b MIMAT0013336 Medicago truncatula miR2617b 12 80
mtr-miR2617c MIMAT0013335 Medicago truncatula miR2617c 12 80
mtr-miR2617a MIMAT0013334 Medicago truncatula miR2617a 12 80
mtr-miR2588b MIMAT0013259 Medicago truncatula miR2588b 12 80
mtr-miR2588a MIMAT0013258 Medicago truncatula miR2588a 12 80
dsi-miR-975 MIMAT0012501 Drosophila simulans miR-975 12 80
cfa-miR-141 MIMAT0009876 Canis familiaris miR-141 12 80
sko-miR-124-5p MIMAT0009624 Saccoglossus kowalevskii miR-124-5p 12 80
bfl-miR-200c MIMAT0009493 Branchiostoma floridae miR-200c 12 80
bfl-miR-124-5p MIMAT0019146 Branchiostoma floridae miR-124-5p 12 80
bta-miR-141 MIMAT0009232 Bos taurus miR-141 12 80
tca-miR-124-5p MIMAT0019114 Tribolium castaneum miR-124-5p 12 80
ptr-miR-200a MIMAT0008063 Pan troglodytes miR-200a 12 80
ptr-miR-142 MIMAT0008037 Pan troglodytes miR-142 12 80
ptr-miR-141 MIMAT0008036 Pan troglodytes miR-141 12 80
mml-miR-200a-3p MIMAT0006233 Macaca mulatta miR-200a-3p 12 80
mml-miR-142-3p MIMAT0006200 Macaca mulatta miR-142-3p 12 80
gma-miR1519 MIMAT0007378 Glycine max miR1519 12 80
csa-miR-141 MIMAT0006129 Ciona savignyi miR-141 12 80
cin-miR-141-3p MIMAT0006103 Ciona intestinalis miR-141-3p 12 80
oan-miR-1398-3p MIMAT0026760 Ornithorhynchus anatinus miR-1398-3p 12 80
oan-miR-142-3p MIMAT0006983 Ornithorhynchus anatinus miR-142-3p 12 80
oan-miR-200a-3p MIMAT0006936 Ornithorhynchus anatinus miR-200a-3p 12 80
dme-miR-1007-5p MIMAT0020904 Drosophila melanogaster miR-1007-5p 12 80
dme-miR-975-5p MIMAT0005491 Drosophila melanogaster miR-975-5p 12 80
mdo-miR-200a-3p MIMAT0004158 Monodelphis domestica miR-200a-3p 12 80
mdo-miR-141-3p MIMAT0004151 Monodelphis domestica miR-141-3p 12 80
mdo-miR-142 MIMAT0004112 Monodelphis domestica miR-142 12 80
sme-miR-87a-5p MIMAT0012109 Schmidtea mediterranea miR-87a-5p 12 80
bta-miR-200a MIMAT0003822 Bos taurus miR-200a 12 80
bta-miR-142-3p MIMAT0003791 Bos taurus miR-142-3p 12 80
xtr-miR-200a MIMAT0003693 Xenopus tropicalis miR-200a 12 80
xtr-miR-142-3p MIMAT0003603 Xenopus tropicalis miR-142-3p 12 80
ebv-miR-BART9-3p MIMAT0003419 Epstein Barr miR-BART9-3p 12 80
tni-miR-200a MIMAT0002982 Tetraodon nigroviridis miR-200a 12 80
fru-miR-200a MIMAT0002981 Fugu rubripes miR-200a 12 80
ppa-miR-141 MIMAT0002201 Pan paniscus miR-141 12 80
ppy-miR-141 MIMAT0002200 Pongo pygmaeus miR-141 12 80
ggo-miR-141 MIMAT0002198 Gorilla gorilla miR-141 12 80
mml-miR-141-3p MIMAT0002196 Macaca mulatta miR-141-3p 12 80
dre-miR-200a-3p MIMAT0001861 Danio rerio miR-200a-3p 12 80
dre-miR-142a-3p MIMAT0003160 Danio rerio miR-142a-3p 12 80
dre-miR-141-3p MIMAT0001837 Danio rerio miR-141-3p 12 80
gga-miR-142-3p MIMAT0001194 Gallus gallus miR-142-3p 12 80
gga-miR-200a-3p MIMAT0001171 Gallus gallus miR-200a-3p 12 80
rno-miR-200a-3p MIMAT0000874 Rattus norvegicus miR-200a-3p 12 80
rno-miR-142-3p MIMAT0000848 Rattus norvegicus miR-142-3p 12 80
rno-miR-141-3p MIMAT0000846 Rattus norvegicus miR-141-3p 12 80
hsa-miR-200a-3p MIMAT0000682 Homo sapiens miR-200a-3p 12 80
mmu-miR-200a-3p MIMAT0000519 Mus musculus miR-200a-3p 12 80
hsa-miR-142-3p MIMAT0000434 Homo sapiens miR-142-3p 12 80
hsa-miR-141-3p MIMAT0000432 Homo sapiens miR-141-3p 12 80
mmu-miR-142a-3p MIMAT0000155 Mus musculus miR-142a-3p 12 80
mmu-miR-141-3p MIMAT0000153 Mus musculus miR-141-3p 12 80
>tch-miR-142 MIMAT0036470 Tupaia chinensis miR-142
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 2 tagtgtt 8
>ppc-miR-8299-5p MIMAT0033115 Pristionchus pacificus miR-8299-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 1 tagtgtt 7
>ipu-miR-142 MIMAT0029419 Ictalurus punctatus miR-142
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 2 tagtgtt 8
>ccr-miR-142-3p MIMAT0026223 Cyprinus carpio miR-142-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 2 tagtgtt 8
>gga-miR-6553-3p MIMAT0025614 Gallus gallus miR-6553-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tagtgtt 7
|||||||
Sbjct: 7 tagtgtt 1
>mmu-miR-6360 MIMAT0025103 Mus musculus miR-6360
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 1 tagtgtt 7
>cgr-miR-142-3p MIMAT0023771 Cricetulus griseus miR-142-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 2 tagtgtt 8
>gma-miR5785 MIMAT0023191 Glycine max miR5785
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 1 tagtgtt 7
>tgu-miR-142-3p MIMAT0026999 Taeniopygia guttata miR-142-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 2 tagtgtt 8
>tgu-miR-338-5p MIMAT0017389 Taeniopygia guttata miR-338-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tagtgtt 7
|||||||
Sbjct: 7 tagtgtt 1
>kshv-miR-K12-10a-3p MIMAT0002179 Kaposi sarcoma-associated
miR-K12-10a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tagtgtt 7
|||||||
Sbjct: 1 tagtgtt 7
>ata-miR2275c-5p MIMAT0037226 Aegilops tauschii miR2275c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>ata-miR395b-3p MIMAT0037151 Aegilops tauschii miR395b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 2 agtgtt 7
>ata-miR2275a-5p MIMAT0037110 Aegilops tauschii miR2275a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>oha-miR-200a MIMAT0036807 Ophiophagus hannah miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>oha-miR-142-3p MIMAT0036722 Ophiophagus hannah miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>tch-miR-141-3p MIMAT0036489 Tupaia chinensis miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>tch-miR-200a-3p MIMAT0036466 Tupaia chinensis miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>gma-miR9746i MIMAT0036383 Glycine max miR9746i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746h MIMAT0036373 Glycine max miR9746h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746g MIMAT0036372 Glycine max miR9746g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746f MIMAT0036371 Glycine max miR9746f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746e MIMAT0036370 Glycine max miR9746e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746d MIMAT0036369 Glycine max miR9746d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746c MIMAT0036368 Glycine max miR9746c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746b MIMAT0036367 Glycine max miR9746b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>gma-miR9746a MIMAT0036366 Glycine max miR9746a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>chi-miR-505-3p MIMAT0036269 Capra hircus miR-505-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 8 agtgtt 3
>chi-miR-200a MIMAT0036045 Capra hircus miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>chi-miR-141 MIMAT0035962 Capra hircus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>efu-miR-142 MIMAT0035200 Eptesicus fuscus miR-142
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>efu-miR-141 MIMAT0035097 Eptesicus fuscus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>efu-miR-200a MIMAT0035013 Eptesicus fuscus miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>efu-miR-9215b MIMAT0034807 Eptesicus fuscus miR-9215b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tagtgt 6
||||||
Sbjct: 6 tagtgt 1
>efu-miR-9215a MIMAT0034806 Eptesicus fuscus miR-9215a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tagtgt 6
||||||
Sbjct: 8 tagtgt 3
>eca-miR-9158 MIMAT0034735 Equus caballus miR-9158
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>eca-miR-9004 MIMAT0034544 Equus caballus miR-9004
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>eca-miR-8986a MIMAT0034523 Equus caballus miR-8986a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 1 tagtgt 6
>sma-miR-8410-3p MIMAT0033525 Schistosoma mansoni miR-8410-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>ssa-miR-200b-3p MIMAT0032480 Salmo salar miR-200b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ssa-miR-142b-3p MIMAT0032364 Salmo salar miR-142b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>ssa-miR-142a-3p MIMAT0032362 Salmo salar miR-142a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>bbe-miR-200c-3p MIMAT0031610 Branchiostoma belcheri miR-200c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>bbe-miR-124-5p MIMAT0031577 Branchiostoma belcheri miR-124-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>stu-miR7987 MIMAT0030860 Solanum tuberosum miR7987
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tagtgt 6
||||||
Sbjct: 6 tagtgt 1
>prd-miR-7937-3p MIMAT0030733 Panagrellus redivivus miR-7937-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>oar-miR-200a MIMAT0030042 Ovis aries miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>ipu-miR-200a MIMAT0029453 Ictalurus punctatus miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ipu-miR-141 MIMAT0029418 Ictalurus punctatus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>aja-miR-142 MIMAT0031136 Artibeus jamaicensis miR-142
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>gga-miR-7444-3p MIMAT0029043 Gallus gallus miR-7444-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>oan-miR-7436-5p MIMAT0029026 Ornithorhynchus anatinus
miR-7436-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 2 agtgtt 7
>mdo-miR-1545b-5p MIMAT0028750 Monodelphis domestica
miR-1545b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>mdo-miR-199b-3-5p MIMAT0031066 Monodelphis domestica
miR-199b-3-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>mdo-miR-199b-2-5p MIMAT0031065 Monodelphis domestica
miR-199b-2-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>mmu-miR-7228-3p MIMAT0028425 Mus musculus miR-7228-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>mml-miR-7168-3p MIMAT0028271 Macaca mulatta miR-7168-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>ccr-miR-200a MIMAT0026258 Cyprinus carpio miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>hsa-miR-6757-3p MIMAT0027415 Homo sapiens miR-6757-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>ggo-miR-200a MIMAT0024300 Gorilla gorilla miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>cgr-miR-141 MIMAT0023769 Cricetulus griseus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>sha-miR-141 MIMAT0022826 Sarcophilus harrisii miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>sha-miR-200a MIMAT0022805 Sarcophilus harrisii miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ola-miR-200a MIMAT0022571 Oryzias latipes miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>aca-miR-200a-3p MIMAT0021845 Anolis carolinensis miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>aca-miR-142-3p MIMAT0021768 Anolis carolinensis miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>bdi-miR395d-3p MIMAT0020723 Brachypodium distachyon miR395d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 2 agtgtt 7
>hsa-miR-3591-5p MIMAT0019876 Homo sapiens miR-3591-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>pma-miR-4595 MIMAT0019628 Petromyzon marinus miR-4595
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 2 agtgtt 7
>hsa-miR-3659 MIMAT0018080 Homo sapiens miR-3659
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>cin-miR-4139-3p MIMAT0016737 Ciona intestinalis miR-4139-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>cin-miR-4061-3p MIMAT0016611 Ciona intestinalis miR-4061-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>rno-miR-3587 MIMAT0017883 Rattus norvegicus miR-3587
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>ppy-miR-609 MIMAT0016050 Pongo pygmaeus miR-609
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>ppy-miR-200a MIMAT0015796 Pongo pygmaeus miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ppy-miR-142-3p MIMAT0015766 Pongo pygmaeus miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>aly-miR840-5p MIMAT0017625 Arabidopsis lyrata miR840-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tagtgt 6
||||||
Sbjct: 6 tagtgt 1
>hsa-miR-3117-5p MIMAT0019197 Homo sapiens miR-3117-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tagtgt 6
||||||
Sbjct: 8 tagtgt 3
>tgu-miR-200a-3p MIMAT0014545 Taeniopygia guttata miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ssc-miR-505 MIMAT0013961 Sus scrofa miR-505
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 8 agtgtt 3
>ssc-miR-142-3p MIMAT0020362 Sus scrofa miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>eca-miR-142-3p MIMAT0013023 Equus caballus miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>eca-miR-141 MIMAT0012970 Equus caballus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>eca-miR-200a MIMAT0012909 Equus caballus miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mtr-miR2617b MIMAT0013336 Medicago truncatula miR2617b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>mtr-miR2617c MIMAT0013335 Medicago truncatula miR2617c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>mtr-miR2617a MIMAT0013334 Medicago truncatula miR2617a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>mtr-miR2588b MIMAT0013259 Medicago truncatula miR2588b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mtr-miR2588a MIMAT0013258 Medicago truncatula miR2588a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>dsi-miR-975 MIMAT0012501 Drosophila simulans miR-975
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 8 agtgtt 3
>cfa-miR-141 MIMAT0009876 Canis familiaris miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>sko-miR-124-5p MIMAT0009624 Saccoglossus kowalevskii miR-124-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>bfl-miR-200c MIMAT0009493 Branchiostoma floridae miR-200c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>bfl-miR-124-5p MIMAT0019146 Branchiostoma floridae miR-124-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>bta-miR-141 MIMAT0009232 Bos taurus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>tca-miR-124-5p MIMAT0019114 Tribolium castaneum miR-124-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>ptr-miR-200a MIMAT0008063 Pan troglodytes miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ptr-miR-142 MIMAT0008037 Pan troglodytes miR-142
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>ptr-miR-141 MIMAT0008036 Pan troglodytes miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mml-miR-200a-3p MIMAT0006233 Macaca mulatta miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mml-miR-142-3p MIMAT0006200 Macaca mulatta miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>gma-miR1519 MIMAT0007378 Glycine max miR1519
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>csa-miR-141 MIMAT0006129 Ciona savignyi miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>cin-miR-141-3p MIMAT0006103 Ciona intestinalis miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>oan-miR-1398-3p MIMAT0026760 Ornithorhynchus anatinus
miR-1398-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>oan-miR-142-3p MIMAT0006983 Ornithorhynchus anatinus miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>oan-miR-200a-3p MIMAT0006936 Ornithorhynchus anatinus
miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>dme-miR-1007-5p MIMAT0020904 Drosophila melanogaster
miR-1007-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 3 agtgtt 8
>dme-miR-975-5p MIMAT0005491 Drosophila melanogaster miR-975-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 8 agtgtt 3
>mdo-miR-200a-3p MIMAT0004158 Monodelphis domestica miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mdo-miR-141-3p MIMAT0004151 Monodelphis domestica miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mdo-miR-142 MIMAT0004112 Monodelphis domestica miR-142
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>sme-miR-87a-5p MIMAT0012109 Schmidtea mediterranea miR-87a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>bta-miR-200a MIMAT0003822 Bos taurus miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>bta-miR-142-3p MIMAT0003791 Bos taurus miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtgtt 7
||||||
Sbjct: 1 agtgtt 6
>xtr-miR-200a MIMAT0003693 Xenopus tropicalis miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>xtr-miR-142-3p MIMAT0003603 Xenopus tropicalis miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>ebv-miR-BART9-3p MIMAT0003419 Epstein Barr miR-BART9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>tni-miR-200a MIMAT0002982 Tetraodon nigroviridis miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>fru-miR-200a MIMAT0002981 Fugu rubripes miR-200a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>ppa-miR-141 MIMAT0002201 Pan paniscus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>ppy-miR-141 MIMAT0002200 Pongo pygmaeus miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>ggo-miR-141 MIMAT0002198 Gorilla gorilla miR-141
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>mml-miR-141-3p MIMAT0002196 Macaca mulatta miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 6 agtgtt 1
>dre-miR-200a-3p MIMAT0001861 Danio rerio miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>dre-miR-142a-3p MIMAT0003160 Danio rerio miR-142a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>dre-miR-141-3p MIMAT0001837 Danio rerio miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>gga-miR-142-3p MIMAT0001194 Gallus gallus miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>gga-miR-200a-3p MIMAT0001171 Gallus gallus miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>rno-miR-200a-3p MIMAT0000874 Rattus norvegicus miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>rno-miR-142-3p MIMAT0000848 Rattus norvegicus miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>rno-miR-141-3p MIMAT0000846 Rattus norvegicus miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>hsa-miR-200a-3p MIMAT0000682 Homo sapiens miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mmu-miR-200a-3p MIMAT0000519 Mus musculus miR-200a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>hsa-miR-142-3p MIMAT0000434 Homo sapiens miR-142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
||||||
Sbjct: 3 tagtgt 8
>hsa-miR-141-3p MIMAT0000432 Homo sapiens miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
>mmu-miR-142a-3p MIMAT0000155 Mus musculus miR-142a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tagtgt 6
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Sbjct: 3 tagtgt 8
>mmu-miR-141-3p MIMAT0000153 Mus musculus miR-141-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtgtt 7
||||||
Sbjct: 7 agtgtt 2
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 160
Number of extensions: 149
Number of successful extensions: 138
Number of sequences better than 100.0: 138
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 138
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
