BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= kshv-miR-k3_ 1_5
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-23b-3p MIMAT0036857 Ophiophagus hannah miR-23b-3p 14 20
oha-miR-23a-3p MIMAT0036855 Ophiophagus hannah miR-23a-3p 14 20
tch-miR-23b-3p MIMAT0036520 Tupaia chinensis miR-23b-3p 14 20
chi-miR-23b-3p MIMAT0036089 Capra hircus miR-23b-3p 14 20
chi-miR-23a MIMAT0036087 Capra hircus miR-23a 14 20
ppc-miR-8323-3p MIMAT0033191 Pristionchus pacificus miR-8323-3p 14 20
ssa-miR-23b-3p MIMAT0032553 Salmo salar miR-23b-3p 14 20
ssa-miR-23a-3p MIMAT0032549 Salmo salar miR-23a-3p 14 20
hsa-miR-8066 MIMAT0030993 Homo sapiens miR-8066 14 20
prd-miR-7879-5p MIMAT0030514 Panagrellus redivivus miR-7879-5p 14 20
hhi-miR-23a MIMAT0030360 Hippoglossus hippoglossus miR-23a 14 20
oar-miR-23b MIMAT0030049 Ovis aries miR-23b 14 20
oar-miR-23a MIMAT0030048 Ovis aries miR-23a 14 20
ipu-miR-23b MIMAT0029482 Ictalurus punctatus miR-23b 14 20
ipu-miR-23a MIMAT0029481 Ictalurus punctatus miR-23a 14 20
ccr-miR-23b MIMAT0026278 Cyprinus carpio miR-23b 14 20
ccr-miR-23a MIMAT0026277 Cyprinus carpio miR-23a 14 20
rno-miR-6329 MIMAT0025068 Rattus norvegicus miR-6329 14 20
ggo-miR-23c MIMAT0024244 Gorilla gorilla miR-23c 14 20
ggo-miR-23b MIMAT0024095 Gorilla gorilla miR-23b 14 20
ptr-miR-23c MIMAT0024048 Pan troglodytes miR-23c 14 20
cgr-miR-23b-3p MIMAT0023865 Cricetulus griseus miR-23b-3p 14 20
cgr-miR-23a-3p MIMAT0023863 Cricetulus griseus miR-23a-3p 14 20
sha-miR-23b MIMAT0022788 Sarcophilus harrisii miR-23b 14 20
sha-miR-23a MIMAT0022786 Sarcophilus harrisii miR-23a 14 20
ola-miR-23b MIMAT0022588 Oryzias latipes miR-23b 14 20
ola-miR-23a MIMAT0022583 Oryzias latipes miR-23a 14 20
aca-miR-23b-3p MIMAT0021898 Anolis carolinensis miR-23b-3p 14 20
aca-miR-23a-3p MIMAT0021896 Anolis carolinensis miR-23a-3p 14 20
pma-miR-23b MIMAT0019404 Petromyzon marinus miR-23b 14 20
pma-miR-23a-3p MIMAT0019403 Petromyzon marinus miR-23a-3p 14 20
hsa-miR-23c MIMAT0018000 Homo sapiens miR-23c 14 20
aly-miR4232 MIMAT0017921 Arabidopsis lyrata miR4232 14 20
tgu-miR-23-3p MIMAT0014566 Taeniopygia guttata miR-23-3p 14 20
ssc-miR-23b MIMAT0013893 Sus scrofa miR-23b 14 20
eca-miR-23b MIMAT0013113 Equus caballus miR-23b 14 20
eca-miR-23a MIMAT0012986 Equus caballus miR-23a 14 20
xla-miR-23a MIMAT0011145 Xenopus laevis miR-23a 14 20
cfa-miR-23a MIMAT0006640 Canis familiaris miR-23a 14 20
cfa-miR-23b MIMAT0006612 Canis familiaris miR-23b 14 20
mml-miR-23b-3p MIMAT0006165 Macaca mulatta miR-23b-3p 14 20
ptc-miR1444c MIMAT0006001 Populus trichocarpa miR1444c 14 20
ptc-miR1444b MIMAT0006000 Populus trichocarpa miR1444b 14 20
oan-miR-23a-3p MIMAT0007061 Ornithorhynchus anatinus miR-23a-3p 14 20
oan-miR-23b-3p MIMAT0006959 Ornithorhynchus anatinus miR-23b-3p 14 20
mdo-miR-23b-3p MIMAT0004176 Monodelphis domestica miR-23b-3p 14 20
mdo-miR-23a-3p MIMAT0004173 Monodelphis domestica miR-23a-3p 14 20
bta-miR-23b-3p MIMAT0003852 Bos taurus miR-23b-3p 14 20
bta-miR-23a MIMAT0003827 Bos taurus miR-23a 14 20
xtr-miR-23b MIMAT0003673 Xenopus tropicalis miR-23b 14 20
xtr-miR-23a MIMAT0003568 Xenopus tropicalis miR-23a 14 20
tni-miR-23b MIMAT0002954 Tetraodon nigroviridis miR-23b 14 20
fru-miR-23b MIMAT0002953 Fugu rubripes miR-23b 14 20
tni-miR-23a MIMAT0002913 Tetraodon nigroviridis miR-23a 14 20
fru-miR-23a MIMAT0002912 Fugu rubripes miR-23a 14 20
mne-miR-23a MIMAT0002756 Macaca nemestrina miR-23a 14 20
sla-miR-23a MIMAT0002754 Saguinus labiatus miR-23a 14 20
mml-miR-23a-3p MIMAT0002752 Macaca mulatta miR-23a-3p 14 20
ptr-miR-23a MIMAT0002749 Pan troglodytes miR-23a 14 20
ppy-miR-23a MIMAT0002747 Pongo pygmaeus miR-23a 14 20
lca-miR-23a MIMAT0002745 Lemur catta miR-23a 14 20
ppa-miR-23a MIMAT0002743 Pan paniscus miR-23a 14 20
age-miR-23a MIMAT0002741 Ateles geoffroyi miR-23a 14 20
ggo-miR-23a MIMAT0002738 Gorilla gorilla miR-23a 14 20
ppa-miR-23b MIMAT0002212 Pan paniscus miR-23b 14 20
ppy-miR-23b MIMAT0002211 Pongo pygmaeus miR-23b 14 20
ptr-miR-23b MIMAT0002210 Pan troglodytes miR-23b 14 20
kshv-miR-K12-3-5p MIMAT0002193 Kaposi sarcoma-associated miR-K12... 14 20
ssc-miR-23a MIMAT0002133 Sus scrofa miR-23a 14 20
dre-miR-23b MIMAT0001791 Danio rerio miR-23b 14 20
dre-miR-23a-3p MIMAT0001790 Danio rerio miR-23a-3p 14 20
mghv-miR-M1-9 MIMAT0001573 Mouse gammaherpesvirus miR-M1-9 14 20
osa-miR418 MIMAT0001334 Oryza sativa miR418 14 20
ath-miR418 MIMAT0001326 Arabidopsis thaliana miR418 14 20
gga-miR-23b-3p MIMAT0001186 Gallus gallus miR-23b-3p 14 20
rno-miR-23b-3p MIMAT0000793 Rattus norvegicus miR-23b-3p 14 20
rno-miR-23a-3p MIMAT0000792 Rattus norvegicus miR-23a-3p 14 20
mmu-miR-23a-3p MIMAT0000532 Mus musculus miR-23a-3p 14 20
hsa-miR-130a-5p MIMAT0004593 Homo sapiens miR-130a-5p 14 20
hsa-miR-23b-3p MIMAT0000418 Homo sapiens miR-23b-3p 14 20
mmu-miR-23b-3p MIMAT0000125 Mus musculus miR-23b-3p 14 20
hsa-miR-23a-3p MIMAT0000078 Homo sapiens miR-23a-3p 14 20
bta-miR-4657 MIMAT0036970 Bos taurus miR-4657 12 80
gma-miR9741 MIMAT0036361 Glycine max miR9741 12 80
chi-miR-323a-3p MIMAT0036133 Capra hircus miR-323a-3p 12 80
dvi-miR-1003-3p MIMAT0035552 Drosophila virilis miR-1003-3p 12 80
nve-miR-9457 MIMAT0035418 Nematostella vectensis miR-9457 12 80
efu-miR-23a MIMAT0035161 Eptesicus fuscus miR-23a 12 80
efu-miR-23b MIMAT0034899 Eptesicus fuscus miR-23b 12 80
atr-miR8605 MIMAT0033894 Amborella trichopoda miR8605 12 80
ppc-miR-8284-3p MIMAT0033072 Pristionchus pacificus miR-8284-3p 12 80
bbe-miR-135a-3p MIMAT0031588 Branchiostoma belcheri miR-135a-3p 12 80
ppe-miR6291c-5p MIMAT0031544 Prunus persica miR6291c-5p 12 80
hsa-miR-8070 MIMAT0030997 Homo sapiens miR-8070 12 80
stu-miR8007b-5p MIMAT0030911 Solanum tuberosum miR8007b-5p 12 80
prd-miR-7948d-3p MIMAT0030767 Panagrellus redivivus miR-7948d-3p 12 80
prd-miR-7906-3p MIMAT0030625 Panagrellus redivivus miR-7906-3p 12 80
lva-miR-2001-5p MIMAT0032222 Lytechinus variegatus miR-2001-5p 12 80
pmi-miR-2001-5p MIMAT0032175 Patiria miniata miR-2001-5p 12 80
ipu-miR-181c MIMAT0029438 Ictalurus punctatus miR-181c 12 80
mdo-miR-7309-3p MIMAT0028617 Monodelphis domestica miR-7309-3p 12 80
mdo-miR-7275-3p MIMAT0028525 Monodelphis domestica miR-7275-3p 12 80
ccr-miR-181c MIMAT0026240 Cyprinus carpio miR-181c 12 80
ddi-miR-7131d MIMAT0028139 Dictyostelium discoideum miR-7131d 12 80
mmu-miR-6902-3p MIMAT0027705 Mus musculus miR-6902-3p 12 80
gga-miR-6555-3p MIMAT0025620 Gallus gallus miR-6555-3p 12 80
nta-miR6164b MIMAT0024781 Nicotiana tabacum miR6164b 12 80
nta-miR6164a MIMAT0024780 Nicotiana tabacum miR6164a 12 80
nta-miR5303b MIMAT0024762 Nicotiana tabacum miR5303b 12 80
nta-miR5303a MIMAT0024761 Nicotiana tabacum miR5303a 12 80
nta-miR6151e MIMAT0024746 Nicotiana tabacum miR6151e 12 80
nta-miR6151d MIMAT0024745 Nicotiana tabacum miR6151d 12 80
nta-miR6151c MIMAT0024744 Nicotiana tabacum miR6151c 12 80
nta-miR6151b MIMAT0024743 Nicotiana tabacum miR6151b 12 80
nta-miR6151a MIMAT0024742 Nicotiana tabacum miR6151a 12 80
ggo-miR-323a MIMAT0024134 Gorilla gorilla miR-323a 12 80
gma-miR5772 MIMAT0023174 Glycine max miR5772 12 80
bra-miR5723 MIMAT0023022 Brassica rapa miR5723 12 80
mtr-miR5210 MIMAT0021143 Medicago truncatula miR5210 12 80
mmu-miR-5129-3p MIMAT0022987 Mus musculus miR-5129-3p 12 80
sko-miR-4822-3p MIMAT0020026 Saccoglossus kowalevskii miR-4822-3p 12 80
hsa-miR-4657 MIMAT0019724 Homo sapiens miR-4657 12 80
oar-miR-323a-3p MIMAT0019260 Ovis aries miR-323a-3p 12 80
hsa-miR-4491 MIMAT0019026 Homo sapiens miR-4491 12 80
gma-miR1520r MIMAT0018313 Glycine max miR1520r 12 80
tca-miR-3871-3p MIMAT0018835 Tribolium castaneum miR-3871-3p 12 80
tca-miR-3805a-5p MIMAT0018632 Tribolium castaneum miR-3805a-5p 12 80
ame-miR-3767 MIMAT0018541 Apis mellifera miR-3767 12 80
ame-miR-3755 MIMAT0018525 Apis mellifera miR-3755 12 80
pab-miR950-5p MIMAT0018123 Picea abies miR950-5p 12 80
hsa-miR-3607-5p MIMAT0017984 Homo sapiens miR-3607-5p 12 80
cin-miR-4159-3p MIMAT0016765 Ciona intestinalis miR-4159-3p 12 80
ppy-miR-323-3p MIMAT0015826 Pongo pygmaeus miR-323-3p 12 80
bmo-miR-3354 MIMAT0015540 Bombyx mori miR-3354 12 80
api-miR-3043 MIMAT0014781 Acyrthosiphon pisum miR-3043 12 80
hma-miR-3003a-3p MIMAT0014668 Hydra magnipapillata miR-3003a-3p 12 80
osa-miR2874 MIMAT0013824 Oryza sativa miR2874 12 80
eca-miR-323-3p MIMAT0013132 Equus caballus miR-323-3p 12 80
rno-miR-511-3p MIMAT0017358 Rattus norvegicus miR-511-3p 12 80
mtr-miR2658 MIMAT0013459 Medicago truncatula miR2658 12 80
mtr-miR2607 MIMAT0013313 Medicago truncatula miR2607 12 80
dsi-miR-1003-3p MIMAT0012428 Drosophila simulans miR-1003-3p 12 80
dps-miR-2559-3p MIMAT0012381 Drosophila pseudoobscura miR-2559-3p 12 80
bta-miR-2409 MIMAT0011967 Bos taurus miR-2409 12 80
cel-miR-2216-5p MIMAT0011447 Caenorhabditis elegans miR-2216-5p 12 80
gma-miR2108b MIMAT0010085 Glycine max miR2108b 12 80
gma-miR2108a MIMAT0010084 Glycine max miR2108a 12 80
spu-miR-2001 MIMAT0009740 Strongylocentrotus purpuratus miR-2001 12 80
ptr-miR-323 MIMAT0008097 Pan troglodytes miR-323 12 80
cfa-miR-323 MIMAT0006718 Canis familiaris miR-323 12 80
mml-miR-511-3p MIMAT0026893 Macaca mulatta miR-511-3p 12 80
mml-miR-323a-3p MIMAT0006265 Macaca mulatta miR-323a-3p 12 80
ptc-miR1444a MIMAT0005999 Populus trichocarpa miR1444a 12 80
dme-miR-1004-3p MIMAT0005017 Drosophila melanogaster miR-1004-3p 12 80
dme-miR-1003-3p MIMAT0005016 Drosophila melanogaster miR-1003-3p 12 80
mmu-miR-511-3p MIMAT0017281 Mus musculus miR-511-3p 12 80
sme-miR-1c-5p MIMAT0012092 Schmidtea mediterranea miR-1c-5p 12 80
hsa-miR-511-3p MIMAT0026606 Homo sapiens miR-511-3p 12 80
dre-miR-181c-5p MIMAT0001852 Danio rerio miR-181c-5p 12 80
hsa-miR-323a-3p MIMAT0000755 Homo sapiens miR-323a-3p 12 80
mmu-miR-323-3p MIMAT0000551 Mus musculus miR-323-3p 12 80
rno-miR-323-3p MIMAT0000550 Rattus norvegicus miR-323-3p 12 80
>oha-miR-23b-3p MIMAT0036857 Ophiophagus hannah miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>oha-miR-23a-3p MIMAT0036855 Ophiophagus hannah miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>tch-miR-23b-3p MIMAT0036520 Tupaia chinensis miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>chi-miR-23b-3p MIMAT0036089 Capra hircus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>chi-miR-23a MIMAT0036087 Capra hircus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ppc-miR-8323-3p MIMAT0033191 Pristionchus pacificus miR-8323-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ssa-miR-23b-3p MIMAT0032553 Salmo salar miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ssa-miR-23a-3p MIMAT0032549 Salmo salar miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>hsa-miR-8066 MIMAT0030993 Homo sapiens miR-8066
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcacatt 7
|||||||
Sbjct: 8 tcacatt 2
>prd-miR-7879-5p MIMAT0030514 Panagrellus redivivus miR-7879-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcacatt 7
|||||||
Sbjct: 7 tcacatt 1
>hhi-miR-23a MIMAT0030360 Hippoglossus hippoglossus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>oar-miR-23b MIMAT0030049 Ovis aries miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>oar-miR-23a MIMAT0030048 Ovis aries miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ipu-miR-23b MIMAT0029482 Ictalurus punctatus miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ipu-miR-23a MIMAT0029481 Ictalurus punctatus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ccr-miR-23b MIMAT0026278 Cyprinus carpio miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ccr-miR-23a MIMAT0026277 Cyprinus carpio miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>rno-miR-6329 MIMAT0025068 Rattus norvegicus miR-6329
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcacatt 7
|||||||
Sbjct: 7 tcacatt 1
>ggo-miR-23c MIMAT0024244 Gorilla gorilla miR-23c
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ggo-miR-23b MIMAT0024095 Gorilla gorilla miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ptr-miR-23c MIMAT0024048 Pan troglodytes miR-23c
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>cgr-miR-23b-3p MIMAT0023865 Cricetulus griseus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>cgr-miR-23a-3p MIMAT0023863 Cricetulus griseus miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>sha-miR-23b MIMAT0022788 Sarcophilus harrisii miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>sha-miR-23a MIMAT0022786 Sarcophilus harrisii miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ola-miR-23b MIMAT0022588 Oryzias latipes miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ola-miR-23a MIMAT0022583 Oryzias latipes miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>aca-miR-23b-3p MIMAT0021898 Anolis carolinensis miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>aca-miR-23a-3p MIMAT0021896 Anolis carolinensis miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>pma-miR-23b MIMAT0019404 Petromyzon marinus miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>pma-miR-23a-3p MIMAT0019403 Petromyzon marinus miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>hsa-miR-23c MIMAT0018000 Homo sapiens miR-23c
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>aly-miR4232 MIMAT0017921 Arabidopsis lyrata miR4232
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 1 tcacatt 7
>tgu-miR-23-3p MIMAT0014566 Taeniopygia guttata miR-23-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ssc-miR-23b MIMAT0013893 Sus scrofa miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>eca-miR-23b MIMAT0013113 Equus caballus miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>eca-miR-23a MIMAT0012986 Equus caballus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>xla-miR-23a MIMAT0011145 Xenopus laevis miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>cfa-miR-23a MIMAT0006640 Canis familiaris miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>cfa-miR-23b MIMAT0006612 Canis familiaris miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mml-miR-23b-3p MIMAT0006165 Macaca mulatta miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ptc-miR1444c MIMAT0006001 Populus trichocarpa miR1444c
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ptc-miR1444b MIMAT0006000 Populus trichocarpa miR1444b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>oan-miR-23a-3p MIMAT0007061 Ornithorhynchus anatinus miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>oan-miR-23b-3p MIMAT0006959 Ornithorhynchus anatinus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mdo-miR-23b-3p MIMAT0004176 Monodelphis domestica miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mdo-miR-23a-3p MIMAT0004173 Monodelphis domestica miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>bta-miR-23b-3p MIMAT0003852 Bos taurus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>bta-miR-23a MIMAT0003827 Bos taurus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>xtr-miR-23b MIMAT0003673 Xenopus tropicalis miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>xtr-miR-23a MIMAT0003568 Xenopus tropicalis miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>tni-miR-23b MIMAT0002954 Tetraodon nigroviridis miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>fru-miR-23b MIMAT0002953 Fugu rubripes miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>tni-miR-23a MIMAT0002913 Tetraodon nigroviridis miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>fru-miR-23a MIMAT0002912 Fugu rubripes miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mne-miR-23a MIMAT0002756 Macaca nemestrina miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>sla-miR-23a MIMAT0002754 Saguinus labiatus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mml-miR-23a-3p MIMAT0002752 Macaca mulatta miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ptr-miR-23a MIMAT0002749 Pan troglodytes miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ppy-miR-23a MIMAT0002747 Pongo pygmaeus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>lca-miR-23a MIMAT0002745 Lemur catta miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ppa-miR-23a MIMAT0002743 Pan paniscus miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>age-miR-23a MIMAT0002741 Ateles geoffroyi miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ggo-miR-23a MIMAT0002738 Gorilla gorilla miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ppa-miR-23b MIMAT0002212 Pan paniscus miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ppy-miR-23b MIMAT0002211 Pongo pygmaeus miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>ptr-miR-23b MIMAT0002210 Pan troglodytes miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>kshv-miR-K12-3-5p MIMAT0002193 Kaposi sarcoma-associated
miR-K12-3-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 1 tcacatt 7
>ssc-miR-23a MIMAT0002133 Sus scrofa miR-23a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>dre-miR-23b MIMAT0001791 Danio rerio miR-23b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>dre-miR-23a-3p MIMAT0001790 Danio rerio miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mghv-miR-M1-9 MIMAT0001573 Mouse gammaherpesvirus miR-M1-9
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 1 tcacatt 7
>osa-miR418 MIMAT0001334 Oryza sativa miR418
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcacatt 7
|||||||
Sbjct: 8 tcacatt 2
>ath-miR418 MIMAT0001326 Arabidopsis thaliana miR418
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcacatt 7
|||||||
Sbjct: 8 tcacatt 2
>gga-miR-23b-3p MIMAT0001186 Gallus gallus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>rno-miR-23b-3p MIMAT0000793 Rattus norvegicus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>rno-miR-23a-3p MIMAT0000792 Rattus norvegicus miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mmu-miR-23a-3p MIMAT0000532 Mus musculus miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>hsa-miR-130a-5p MIMAT0004593 Homo sapiens miR-130a-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>hsa-miR-23b-3p MIMAT0000418 Homo sapiens miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>mmu-miR-23b-3p MIMAT0000125 Mus musculus miR-23b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>hsa-miR-23a-3p MIMAT0000078 Homo sapiens miR-23a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcacatt 7
|||||||
Sbjct: 2 tcacatt 8
>bta-miR-4657 MIMAT0036970 Bos taurus miR-4657
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>gma-miR9741 MIMAT0036361 Glycine max miR9741
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>chi-miR-323a-3p MIMAT0036133 Capra hircus miR-323a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>dvi-miR-1003-3p MIMAT0035552 Drosophila virilis miR-1003-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>nve-miR-9457 MIMAT0035418 Nematostella vectensis miR-9457
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 3 cacatt 8
>efu-miR-23a MIMAT0035161 Eptesicus fuscus miR-23a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>efu-miR-23b MIMAT0034899 Eptesicus fuscus miR-23b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>atr-miR8605 MIMAT0033894 Amborella trichopoda miR8605
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>ppc-miR-8284-3p MIMAT0033072 Pristionchus pacificus miR-8284-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 1 tcacat 6
>bbe-miR-135a-3p MIMAT0031588 Branchiostoma belcheri miR-135a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>ppe-miR6291c-5p MIMAT0031544 Prunus persica miR6291c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 2 cacatt 7
>hsa-miR-8070 MIMAT0030997 Homo sapiens miR-8070
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>stu-miR8007b-5p MIMAT0030911 Solanum tuberosum miR8007b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>prd-miR-7948d-3p MIMAT0030767 Panagrellus redivivus
miR-7948d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>prd-miR-7906-3p MIMAT0030625 Panagrellus redivivus miR-7906-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>lva-miR-2001-5p MIMAT0032222 Lytechinus variegatus miR-2001-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>pmi-miR-2001-5p MIMAT0032175 Patiria miniata miR-2001-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>ipu-miR-181c MIMAT0029438 Ictalurus punctatus miR-181c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>mdo-miR-7309-3p MIMAT0028617 Monodelphis domestica miR-7309-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>mdo-miR-7275-3p MIMAT0028525 Monodelphis domestica miR-7275-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>ccr-miR-181c MIMAT0026240 Cyprinus carpio miR-181c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>ddi-miR-7131d MIMAT0028139 Dictyostelium discoideum miR-7131d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 3 cacatt 8
>mmu-miR-6902-3p MIMAT0027705 Mus musculus miR-6902-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 8 tcacat 3
>gga-miR-6555-3p MIMAT0025620 Gallus gallus miR-6555-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>nta-miR6164b MIMAT0024781 Nicotiana tabacum miR6164b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 1 tcacat 6
>nta-miR6164a MIMAT0024780 Nicotiana tabacum miR6164a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 1 tcacat 6
>nta-miR5303b MIMAT0024762 Nicotiana tabacum miR5303b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>nta-miR5303a MIMAT0024761 Nicotiana tabacum miR5303a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>nta-miR6151e MIMAT0024746 Nicotiana tabacum miR6151e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>nta-miR6151d MIMAT0024745 Nicotiana tabacum miR6151d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>nta-miR6151c MIMAT0024744 Nicotiana tabacum miR6151c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>nta-miR6151b MIMAT0024743 Nicotiana tabacum miR6151b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>nta-miR6151a MIMAT0024742 Nicotiana tabacum miR6151a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>ggo-miR-323a MIMAT0024134 Gorilla gorilla miR-323a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>gma-miR5772 MIMAT0023174 Glycine max miR5772
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>bra-miR5723 MIMAT0023022 Brassica rapa miR5723
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>mtr-miR5210 MIMAT0021143 Medicago truncatula miR5210
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>mmu-miR-5129-3p MIMAT0022987 Mus musculus miR-5129-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>sko-miR-4822-3p MIMAT0020026 Saccoglossus kowalevskii
miR-4822-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>hsa-miR-4657 MIMAT0019724 Homo sapiens miR-4657
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>oar-miR-323a-3p MIMAT0019260 Ovis aries miR-323a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>hsa-miR-4491 MIMAT0019026 Homo sapiens miR-4491
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>gma-miR1520r MIMAT0018313 Glycine max miR1520r
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>tca-miR-3871-3p MIMAT0018835 Tribolium castaneum miR-3871-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>tca-miR-3805a-5p MIMAT0018632 Tribolium castaneum miR-3805a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>ame-miR-3767 MIMAT0018541 Apis mellifera miR-3767
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 3 cacatt 8
>ame-miR-3755 MIMAT0018525 Apis mellifera miR-3755
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>pab-miR950-5p MIMAT0018123 Picea abies miR950-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 1 tcacat 6
>hsa-miR-3607-5p MIMAT0017984 Homo sapiens miR-3607-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 8 tcacat 3
>cin-miR-4159-3p MIMAT0016765 Ciona intestinalis miR-4159-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>ppy-miR-323-3p MIMAT0015826 Pongo pygmaeus miR-323-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>bmo-miR-3354 MIMAT0015540 Bombyx mori miR-3354
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 1 tcacat 6
>api-miR-3043 MIMAT0014781 Acyrthosiphon pisum miR-3043
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>hma-miR-3003a-3p MIMAT0014668 Hydra magnipapillata miR-3003a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>osa-miR2874 MIMAT0013824 Oryza sativa miR2874
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>eca-miR-323-3p MIMAT0013132 Equus caballus miR-323-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>rno-miR-511-3p MIMAT0017358 Rattus norvegicus miR-511-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>mtr-miR2658 MIMAT0013459 Medicago truncatula miR2658
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>mtr-miR2607 MIMAT0013313 Medicago truncatula miR2607
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>dsi-miR-1003-3p MIMAT0012428 Drosophila simulans miR-1003-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>dps-miR-2559-3p MIMAT0012381 Drosophila pseudoobscura
miR-2559-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 1 tcacat 6
>bta-miR-2409 MIMAT0011967 Bos taurus miR-2409
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>cel-miR-2216-5p MIMAT0011447 Caenorhabditis elegans miR-2216-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 2 cacatt 7
>gma-miR2108b MIMAT0010085 Glycine max miR2108b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>gma-miR2108a MIMAT0010084 Glycine max miR2108a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 8 cacatt 3
>spu-miR-2001 MIMAT0009740 Strongylocentrotus purpuratus
miR-2001
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcacat 6
||||||
Sbjct: 6 tcacat 1
>ptr-miR-323 MIMAT0008097 Pan troglodytes miR-323
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>cfa-miR-323 MIMAT0006718 Canis familiaris miR-323
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>mml-miR-511-3p MIMAT0026893 Macaca mulatta miR-511-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>mml-miR-323a-3p MIMAT0006265 Macaca mulatta miR-323a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>ptc-miR1444a MIMAT0005999 Populus trichocarpa miR1444a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 3 cacatt 8
>dme-miR-1004-3p MIMAT0005017 Drosophila melanogaster
miR-1004-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>dme-miR-1003-3p MIMAT0005016 Drosophila melanogaster
miR-1003-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcacat 6
||||||
Sbjct: 3 tcacat 8
>mmu-miR-511-3p MIMAT0017281 Mus musculus miR-511-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>sme-miR-1c-5p MIMAT0012092 Schmidtea mediterranea miR-1c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>hsa-miR-511-3p MIMAT0026606 Homo sapiens miR-511-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cacatt 7
||||||
Sbjct: 6 cacatt 1
>dre-miR-181c-5p MIMAT0001852 Danio rerio miR-181c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>hsa-miR-323a-3p MIMAT0000755 Homo sapiens miR-323a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>mmu-miR-323-3p MIMAT0000551 Mus musculus miR-323-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
>rno-miR-323-3p MIMAT0000550 Rattus norvegicus miR-323-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cacatt 7
||||||
Sbjct: 1 cacatt 6
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 260
Number of extensions: 178
Number of successful extensions: 162
Number of sequences better than 100.0: 162
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 162
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
