BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mghv-miR-m1-9
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
aly-miR4232 MIMAT0017921 Arabidopsis lyrata miR4232 16 6.9
mghv-miR-M1-9 MIMAT0001573 Mouse gammaherpesvirus miR-M1-9 16 6.9
oha-miR-23b-3p MIMAT0036857 Ophiophagus hannah miR-23b-3p 14 27
oha-miR-23a-3p MIMAT0036855 Ophiophagus hannah miR-23a-3p 14 27
tch-miR-9771n MIMAT0036610 Tupaia chinensis miR-9771n 14 27
tch-miR-23b-3p MIMAT0036520 Tupaia chinensis miR-23b-3p 14 27
chi-miR-23b-3p MIMAT0036089 Capra hircus miR-23b-3p 14 27
chi-miR-23a MIMAT0036087 Capra hircus miR-23a 14 27
ppc-miR-8323-3p MIMAT0033191 Pristionchus pacificus miR-8323-3p 14 27
ssa-miR-23b-3p MIMAT0032553 Salmo salar miR-23b-3p 14 27
ssa-miR-23a-3p MIMAT0032549 Salmo salar miR-23a-3p 14 27
ppe-miR6291c-5p MIMAT0031544 Prunus persica miR6291c-5p 14 27
hsa-miR-8066 MIMAT0030993 Homo sapiens miR-8066 14 27
prd-miR-7879-5p MIMAT0030514 Panagrellus redivivus miR-7879-5p 14 27
hhi-miR-23a MIMAT0030360 Hippoglossus hippoglossus miR-23a 14 27
oar-miR-23b MIMAT0030049 Ovis aries miR-23b 14 27
oar-miR-23a MIMAT0030048 Ovis aries miR-23a 14 27
ipu-miR-23b MIMAT0029482 Ictalurus punctatus miR-23b 14 27
ipu-miR-23a MIMAT0029481 Ictalurus punctatus miR-23a 14 27
ccr-miR-23b MIMAT0026278 Cyprinus carpio miR-23b 14 27
ccr-miR-23a MIMAT0026277 Cyprinus carpio miR-23a 14 27
rno-miR-6329 MIMAT0025068 Rattus norvegicus miR-6329 14 27
nta-miR5303b MIMAT0024762 Nicotiana tabacum miR5303b 14 27
nta-miR5303a MIMAT0024761 Nicotiana tabacum miR5303a 14 27
ggo-miR-23c MIMAT0024244 Gorilla gorilla miR-23c 14 27
ggo-miR-23b MIMAT0024095 Gorilla gorilla miR-23b 14 27
ptr-miR-23c MIMAT0024048 Pan troglodytes miR-23c 14 27
cgr-miR-23b-3p MIMAT0023865 Cricetulus griseus miR-23b-3p 14 27
cgr-miR-23a-3p MIMAT0023863 Cricetulus griseus miR-23a-3p 14 27
sha-miR-23b MIMAT0022788 Sarcophilus harrisii miR-23b 14 27
sha-miR-23a MIMAT0022786 Sarcophilus harrisii miR-23a 14 27
ola-miR-23b MIMAT0022588 Oryzias latipes miR-23b 14 27
ola-miR-23a MIMAT0022583 Oryzias latipes miR-23a 14 27
aca-miR-23b-3p MIMAT0021898 Anolis carolinensis miR-23b-3p 14 27
aca-miR-23a-3p MIMAT0021896 Anolis carolinensis miR-23a-3p 14 27
mtr-miR5210 MIMAT0021143 Medicago truncatula miR5210 14 27
pma-miR-23b MIMAT0019404 Petromyzon marinus miR-23b 14 27
pma-miR-23a-3p MIMAT0019403 Petromyzon marinus miR-23a-3p 14 27
tca-miR-3871-3p MIMAT0018835 Tribolium castaneum miR-3871-3p 14 27
hsa-miR-23c MIMAT0018000 Homo sapiens miR-23c 14 27
hma-miR-3003a-3p MIMAT0014668 Hydra magnipapillata miR-3003a-3p 14 27
tgu-miR-23-3p MIMAT0014566 Taeniopygia guttata miR-23-3p 14 27
ssc-miR-23b MIMAT0013893 Sus scrofa miR-23b 14 27
eca-miR-23b MIMAT0013113 Equus caballus miR-23b 14 27
eca-miR-23a MIMAT0012986 Equus caballus miR-23a 14 27
cel-miR-2216-5p MIMAT0011447 Caenorhabditis elegans miR-2216-5p 14 27
xla-miR-23a MIMAT0011145 Xenopus laevis miR-23a 14 27
cfa-miR-23a MIMAT0006640 Canis familiaris miR-23a 14 27
cfa-miR-23b MIMAT0006612 Canis familiaris miR-23b 14 27
mml-miR-23b-3p MIMAT0006165 Macaca mulatta miR-23b-3p 14 27
ptc-miR1444c MIMAT0006001 Populus trichocarpa miR1444c 14 27
ptc-miR1444b MIMAT0006000 Populus trichocarpa miR1444b 14 27
oan-miR-23a-3p MIMAT0007061 Ornithorhynchus anatinus miR-23a-3p 14 27
oan-miR-23b-3p MIMAT0006959 Ornithorhynchus anatinus miR-23b-3p 14 27
mdo-miR-23b-3p MIMAT0004176 Monodelphis domestica miR-23b-3p 14 27
mdo-miR-23a-3p MIMAT0004173 Monodelphis domestica miR-23a-3p 14 27
bta-miR-23b-3p MIMAT0003852 Bos taurus miR-23b-3p 14 27
bta-miR-23a MIMAT0003827 Bos taurus miR-23a 14 27
xtr-miR-23b MIMAT0003673 Xenopus tropicalis miR-23b 14 27
xtr-miR-23a MIMAT0003568 Xenopus tropicalis miR-23a 14 27
tni-miR-23b MIMAT0002954 Tetraodon nigroviridis miR-23b 14 27
fru-miR-23b MIMAT0002953 Fugu rubripes miR-23b 14 27
tni-miR-23a MIMAT0002913 Tetraodon nigroviridis miR-23a 14 27
fru-miR-23a MIMAT0002912 Fugu rubripes miR-23a 14 27
mne-miR-23a MIMAT0002756 Macaca nemestrina miR-23a 14 27
sla-miR-23a MIMAT0002754 Saguinus labiatus miR-23a 14 27
mml-miR-23a-3p MIMAT0002752 Macaca mulatta miR-23a-3p 14 27
ptr-miR-23a MIMAT0002749 Pan troglodytes miR-23a 14 27
ppy-miR-23a MIMAT0002747 Pongo pygmaeus miR-23a 14 27
lca-miR-23a MIMAT0002745 Lemur catta miR-23a 14 27
ppa-miR-23a MIMAT0002743 Pan paniscus miR-23a
