BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= dev-miR-d6-3p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ppc-miR-8329-5p MIMAT0033202 Pristionchus pacificus miR-8329-5p        14      20
mmu-miR-7668-5p MIMAT0029842 Mus musculus miR-7668-5p                  14      20
dev-miR-D6-3p MIMAT0028176 Duck enteritis miR-D6-3p                    14      20
pde-miR1311 MIMAT0025348 Pinus densata miR1311                         14      20
hsa-miR-4714-5p MIMAT0019822 Homo sapiens miR-4714-5p                  14      20
pab-miR1311 MIMAT0018162 Picea abies miR1311                           14      20
ath-miR3434-3p MIMAT0017738 Arabidopsis thaliana miR3434-3p            14      20
aly-miR3442-3p MIMAT0017718 Arabidopsis lyrata miR3442-3p              14      20
osa-miR2090 MIMAT0010045 Oryza sativa miR2090                          14      20
pta-miR1311 MIMAT0009128 Pinus taeda miR1311                           14      20
ssc-miR-9842-5p MIMAT0037060 Sus scrofa miR-9842-5p                    12      80
bdi-miR845 MIMAT0035529 Brachypodium distachyon miR845                 12      80
efu-miR-9255 MIMAT0034873 Eptesicus fuscus miR-9255                    12      80
eca-miR-9062 MIMAT0034607 Equus caballus miR-9062                      12      80
pxy-miR-283 MIMAT0033786 Plutella xylostella miR-283                   12      80
cel-miR-2217b-5p MIMAT0032841 Caenorhabditis elegans miR-2217b-5p      12      80
ssa-miR-8157-3p MIMAT0032737 Salmo salar miR-8157-3p                   12      80
ssa-miR-301d-5p MIMAT0032598 Salmo salar miR-301d-5p                   12      80
mmu-miR-8106 MIMAT0031411 Mus musculus miR-8106                        12      80
prd-miR-240-5p MIMAT0030592 Panagrellus redivivus miR-240-5p           12      80
prd-miR-7888-3p MIMAT0030549 Panagrellus redivivus miR-7888-3p         12      80
bdi-miR7783-3p MIMAT0030321 Brachypodium distachyon miR7783-3p         12      80
bta-miR-6529b MIMAT0029947 Bos taurus miR-6529b                        12      80
ipu-miR-7563c MIMAT0029562 Ictalurus punctatus miR-7563c               12      80
oan-miR-7403-5p MIMAT0028948 Ornithorhynchus anatinus miR-7403-5p      12      80
oan-miR-7400-3p MIMAT0028943 Ornithorhynchus anatinus miR-7400-3p      12      80
mdo-miR-7386d-5p MIMAT0028850 Monodelphis domestica miR-7386d-5p       12      80
mdo-miR-7326-5p MIMAT0028654 Monodelphis domestica miR-7326-5p         12      80
mmu-miR-7215-3p MIMAT0028399 Mus musculus miR-7215-3p                  12      80
cme-miR1863 MIMAT0026101 Cucumis melo miR1863                          12      80
mmu-miR-7094-3p MIMAT0028095 Mus musculus miR-7094-3p                  12      80
mmu-miR-7090-5p MIMAT0028086 Mus musculus miR-7090-5p                  12      80
mmu-miR-7084-3p MIMAT0028075 Mus musculus miR-7084-3p                  12      80
mmu-miR-7064-5p MIMAT0028032 Mus musculus miR-7064-5p                  12      80
gga-miR-6683-3p MIMAT0025788 Gallus gallus miR-6683-3p                 12      80
bta-miR-6524 MIMAT0025553 Bos taurus miR-6524                          12      80
ptc-miR6470 MIMAT0025209 Populus trichocarpa miR6470                   12      80
hsa-miR-5586-3p MIMAT0022288 Homo sapiens miR-5586-3p                  12      80
mtr-miR5213-3p MIMAT0021147 Medicago truncatula miR5213-3p             12      80
hsa-miR-4797-5p MIMAT0019972 Homo sapiens miR-4797-5p                  12      80
pma-miR-222-5p MIMAT0019533 Petromyzon marinus miR-222-5p              12      80
hsa-miR-4522 MIMAT0019060 Homo sapiens miR-4522                        12      80
tca-miR-3829-5p MIMAT0018688 Tribolium castaneum miR-3829-5p           12      80
pab-miR1863 MIMAT0018163 Picea abies miR1863                           12      80
mmu-miR-3470b MIMAT0015641 Mus musculus miR-3470b                      12      80
aly-miR402-3p MIMAT0017682 Arabidopsis lyrata miR402-3p                12      80
bmo-miR-3239 MIMAT0015422 Bombyx mori miR-3239                         12      80
bmo-miR-3217 MIMAT0015397 Bombyx mori miR-3217                         12      80
hsa-miR-3192-3p MIMAT0027027 Homo sapiens miR-3192-3p                  12      80
mmu-miR-3082-5p MIMAT0014872 Mus musculus miR-3082-5p                  12      80
osa-miR1863b MIMAT0013836 Oryza sativa miR1863b                        12      80
bmo-miR-2778b-3p MIMAT0013676 Bombyx mori miR-2778b-3p                 12      80
bmo-miR-2778d-3p MIMAT0013674 Bombyx mori miR-2778d-3p                 12      80
bmo-miR-2778c-3p MIMAT0013667 Bombyx mori miR-2778c-3p                 12      80
bmo-miR-2778a-3p MIMAT0013665 Bombyx mori miR-2778a-3p                 12      80
bta-miR-2461-5p MIMAT0012047 Bos taurus miR-2461-5p                    12      80
bta-miR-2319b MIMAT0011843 Bos taurus miR-2319b                        12      80
bta-miR-2319a MIMAT0011842 Bos taurus miR-2319a                        12      80
cel-miR-2217a-5p MIMAT0011451 Caenorhabditis elegans miR-2217a-5p      12      80
mmu-miR-1896 MIMAT0007873 Mus musculus miR-1896                        12      80
osa-miR1863a MIMAT0007813 Oryza sativa miR1863a                        12      80
cfa-miR-1837 MIMAT0006630 Canis familiaris miR-1837                    12      80
gga-miR-1756b MIMAT0007712 Gallus gallus miR-1756b                     12      80
gga-miR-1783 MIMAT0007695 Gallus gallus miR-1783                       12      80
gga-miR-1757 MIMAT0007664 Gallus gallus miR-1757                       12      80
gga-miR-1700 MIMAT0007592 Gallus gallus miR-1700                       12      80
gga-miR-1650 MIMAT0007528 Gallus gallus miR-1650                       12      80
mdo-miR-1547-5p MIMAT0006147 Monodelphis domestica miR-1547-5p         12      80
gga-miR-1465 MIMAT0007343 Gallus gallus miR-1465                       12      80
mml-miR-514a-5p MIMAT0026748 Macaca mulatta miR-514a-5p                12      80
ath-miR829-3p.1 MIMAT0004245 Arabidopsis thaliana miR829-3p.1          12      80
hsa-miR-514a-5p MIMAT0022702 Homo sapiens miR-514a-5p                  12      80
>ppc-miR-8329-5p MIMAT0033202 Pristionchus pacificus miR-8329-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 7 tcagagt 1
>mmu-miR-7668-5p MIMAT0029842 Mus musculus miR-7668-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 8 tcagagt 2
>dev-miR-D6-3p MIMAT0028176 Duck enteritis miR-D6-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 2 tcagagt 8
>pde-miR1311 MIMAT0025348 Pinus densata miR1311
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 1 tcagagt 7
>hsa-miR-4714-5p MIMAT0019822 Homo sapiens miR-4714-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 8 tcagagt 2
>pab-miR1311 MIMAT0018162 Picea abies miR1311
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 1 tcagagt 7
>ath-miR3434-3p MIMAT0017738 Arabidopsis thaliana miR3434-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 1 tcagagt 7
>aly-miR3442-3p MIMAT0017718 Arabidopsis lyrata miR3442-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 2 tcagagt 8
>osa-miR2090 MIMAT0010045 Oryza sativa miR2090
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 8 tcagagt 2
>pta-miR1311 MIMAT0009128 Pinus taeda miR1311
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tcagagt 7
         |||||||
Sbjct: 1 tcagagt 7
>ssc-miR-9842-5p MIMAT0037060 Sus scrofa miR-9842-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>bdi-miR845 MIMAT0035529 Brachypodium distachyon miR845
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>efu-miR-9255 MIMAT0034873 Eptesicus fuscus miR-9255
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>eca-miR-9062 MIMAT0034607 Equus caballus miR-9062
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>pxy-miR-283 MIMAT0033786 Plutella xylostella miR-283
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>cel-miR-2217b-5p MIMAT0032841 Caenorhabditis elegans
         miR-2217b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>ssa-miR-8157-3p MIMAT0032737 Salmo salar miR-8157-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 6 cagagt 1
>ssa-miR-301d-5p MIMAT0032598 Salmo salar miR-301d-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 6 tcagag 1
>mmu-miR-8106 MIMAT0031411 Mus musculus miR-8106
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>prd-miR-240-5p MIMAT0030592 Panagrellus redivivus miR-240-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 3 cagagt 8
>prd-miR-7888-3p MIMAT0030549 Panagrellus redivivus miR-7888-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>bdi-miR7783-3p MIMAT0030321 Brachypodium distachyon miR7783-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>bta-miR-6529b MIMAT0029947 Bos taurus miR-6529b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 6 cagagt 1
>ipu-miR-7563c MIMAT0029562 Ictalurus punctatus miR-7563c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>oan-miR-7403-5p MIMAT0028948 Ornithorhynchus anatinus
         miR-7403-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 1 tcagag 6
>oan-miR-7400-3p MIMAT0028943 Ornithorhynchus anatinus
         miR-7400-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 6 tcagag 1
>mdo-miR-7386d-5p MIMAT0028850 Monodelphis domestica
         miR-7386d-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 6 cagagt 1
>mdo-miR-7326-5p MIMAT0028654 Monodelphis domestica miR-7326-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 1 tcagag 6
>mmu-miR-7215-3p MIMAT0028399 Mus musculus miR-7215-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>cme-miR1863 MIMAT0026101 Cucumis melo miR1863
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>mmu-miR-7094-3p MIMAT0028095 Mus musculus miR-7094-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 7 cagagt 2
>mmu-miR-7090-5p MIMAT0028086 Mus musculus miR-7090-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>mmu-miR-7084-3p MIMAT0028075 Mus musculus miR-7084-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>mmu-miR-7064-5p MIMAT0028032 Mus musculus miR-7064-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 1 tcagag 6
>gga-miR-6683-3p MIMAT0025788 Gallus gallus miR-6683-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 1 tcagag 6
>bta-miR-6524 MIMAT0025553 Bos taurus miR-6524
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>ptc-miR6470 MIMAT0025209 Populus trichocarpa miR6470
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 6 tcagag 1
>hsa-miR-5586-3p MIMAT0022288 Homo sapiens miR-5586-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>mtr-miR5213-3p MIMAT0021147 Medicago truncatula miR5213-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>hsa-miR-4797-5p MIMAT0019972 Homo sapiens miR-4797-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 3 cagagt 8
>pma-miR-222-5p MIMAT0019533 Petromyzon marinus miR-222-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>hsa-miR-4522 MIMAT0019060 Homo sapiens miR-4522
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>tca-miR-3829-5p MIMAT0018688 Tribolium castaneum miR-3829-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>pab-miR1863 MIMAT0018163 Picea abies miR1863
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>mmu-miR-3470b MIMAT0015641 Mus musculus miR-3470b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>aly-miR402-3p MIMAT0017682 Arabidopsis lyrata miR402-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 2 cagagt 7
>bmo-miR-3239 MIMAT0015422 Bombyx mori miR-3239
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 1 tcagag 6
>bmo-miR-3217 MIMAT0015397 Bombyx mori miR-3217
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>hsa-miR-3192-3p MIMAT0027027 Homo sapiens miR-3192-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 6 tcagag 1
>mmu-miR-3082-5p MIMAT0014872 Mus musculus miR-3082-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 3 cagagt 8
>osa-miR1863b MIMAT0013836 Oryza sativa miR1863b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>bmo-miR-2778b-3p MIMAT0013676 Bombyx mori miR-2778b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>bmo-miR-2778d-3p MIMAT0013674 Bombyx mori miR-2778d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>bmo-miR-2778c-3p MIMAT0013667 Bombyx mori miR-2778c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>bmo-miR-2778a-3p MIMAT0013665 Bombyx mori miR-2778a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>bta-miR-2461-5p MIMAT0012047 Bos taurus miR-2461-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>bta-miR-2319b MIMAT0011843 Bos taurus miR-2319b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 7 cagagt 2
>bta-miR-2319a MIMAT0011842 Bos taurus miR-2319a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 8 cagagt 3
>cel-miR-2217a-5p MIMAT0011451 Caenorhabditis elegans
         miR-2217a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 1 cagagt 6
>mmu-miR-1896 MIMAT0007873 Mus musculus miR-1896
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>osa-miR1863a MIMAT0007813 Oryza sativa miR1863a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>cfa-miR-1837 MIMAT0006630 Canis familiaris miR-1837
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>gga-miR-1756b MIMAT0007712 Gallus gallus miR-1756b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>gga-miR-1783 MIMAT0007695 Gallus gallus miR-1783
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>gga-miR-1757 MIMAT0007664 Gallus gallus miR-1757
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 1 tcagag 6
>gga-miR-1700 MIMAT0007592 Gallus gallus miR-1700
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>gga-miR-1650 MIMAT0007528 Gallus gallus miR-1650
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>mdo-miR-1547-5p MIMAT0006147 Monodelphis domestica miR-1547-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>gga-miR-1465 MIMAT0007343 Gallus gallus miR-1465
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 3 tcagag 8
>mml-miR-514a-5p MIMAT0026748 Macaca mulatta miR-514a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 7 cagagt 2
>ath-miR829-3p.1 MIMAT0004245 Arabidopsis thaliana miR829-3p.1
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tcagag 6
         ||||||
Sbjct: 8 tcagag 3
>hsa-miR-514a-5p MIMAT0022702 Homo sapiens miR-514a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 cagagt 7
         ||||||
Sbjct: 7 cagagt 2
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 122
Number of extensions: 112
Number of successful extensions: 72
Number of sequences better than 100.0: 72
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 72
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)