BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wssv-miR154-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ppc-miR-8364t-5p MIMAT0033284 Pristionchus pacificus miR-8364t-5p 14 20
ppc-miR-8364s-5p MIMAT0033270 Pristionchus pacificus miR-8364s-5p 14 20
ppc-miR-8364r-5p MIMAT0033262 Pristionchus pacificus miR-8364r-5p 14 20
ppc-miR-8364e-5p MIMAT0033260 Pristionchus pacificus miR-8364e-5p 14 20
ppc-miR-8364i-5p MIMAT0033216 Pristionchus pacificus miR-8364i-5p 14 20
ppc-miR-8364m-5p MIMAT0033188 Pristionchus pacificus miR-8364m-5p 14 20
ppc-miR-8364a-5p MIMAT0033176 Pristionchus pacificus miR-8364a-5p 14 20
ppc-miR-8364w-5p MIMAT0033161 Pristionchus pacificus miR-8364w-5p 14 20
ppc-miR-8364g-5p MIMAT0033119 Pristionchus pacificus miR-8364g-5p 14 20
ppc-miR-8364f-5p MIMAT0033109 Pristionchus pacificus miR-8364f-5p 14 20
ppc-miR-8364b-5p MIMAT0033081 Pristionchus pacificus miR-8364b-5p 14 20
ppc-miR-8364n-5p MIMAT0033045 Pristionchus pacificus miR-8364n-5p 14 20
ppc-miR-8364c-5p MIMAT0033030 Pristionchus pacificus miR-8364c-5p 14 20
ppc-miR-8364j-5p MIMAT0033026 Pristionchus pacificus miR-8364j-5p 14 20
mml-miR-7186-3p MIMAT0028327 Macaca mulatta miR-7186-3p 14 20
mmu-miR-7013-5p MIMAT0027930 Mus musculus miR-7013-5p 14 20
mtr-miR5293 MIMAT0021359 Medicago truncatula miR5293 14 20
bta-miR-3533 MIMAT0036975 Bos taurus miR-3533 12 80
oha-miR-205b-5p MIMAT0036817 Ophiophagus hannah miR-205b-5p 12 80
oha-miR-205a-5p MIMAT0036815 Ophiophagus hannah miR-205a-5p 12 80
efu-miR-205 MIMAT0035156 Eptesicus fuscus miR-205 12 80
efu-miR-9218 MIMAT0034810 Eptesicus fuscus miR-9218 12 80
eca-miR-8910 MIMAT0034438 Equus caballus miR-8910 12 80
ppc-miR-8345-5p MIMAT0033236 Pristionchus pacificus miR-8345-5p 12 80
ppc-miR-8332-3p MIMAT0033209 Pristionchus pacificus miR-8332-3p 12 80
ppc-miR-8364h-5p MIMAT0033063 Pristionchus pacificus miR-8364h-5p 12 80
ppc-miR-8364d-5p MIMAT0032910 Pristionchus pacificus miR-8364d-5p 12 80
ssa-miR-205b-5p MIMAT0032495 Salmo salar miR-205b-5p 12 80
ssa-miR-205a-5p MIMAT0032492 Salmo salar miR-205a-5p 12 80
hbv-miR-B8-3p MIMAT0031768 Herpes B miR-B8-3p 12 80
osa-miR6249b MIMAT0031378 Oryza sativa miR6249b 12 80
hsa-miR-8060 MIMAT0030987 Homo sapiens miR-8060 12 80
hsa-miR-7843-3p MIMAT0030412 Homo sapiens miR-7843-3p 12 80
bdi-miR7723b-3p MIMAT0030255 Brachypodium distachyon miR7723b-3p 12 80
ipu-miR-205 MIMAT0029460 Ictalurus punctatus miR-205 12 80
mdo-miR-7291-3p MIMAT0028567 Monodelphis domestica miR-7291-3p 12 80
ccr-miR-205 MIMAT0026263 Cyprinus carpio miR-205 12 80
mdm-miR169f MIMAT0026068 Malus domestica miR169f 12 80
mdm-miR169e MIMAT0026067 Malus domestica miR169e 12 80
mmu-miR-7116-5p MIMAT0028129 Mus musculus miR-7116-5p 12 80
mmu-miR-7094-1-5p MIMAT0028094 Mus musculus miR-7094-1-5p 12 80
hsa-miR-6754-3p MIMAT0027409 Homo sapiens miR-6754-3p 12 80
gga-miR-6699-5p MIMAT0025808 Gallus gallus miR-6699-5p 12 80
hsa-miR-6515-3p MIMAT0025487 Homo sapiens miR-6515-3p 12 80
gma-miR395m MIMAT0024925 Glycine max miR395m 12 80
gma-miR395l MIMAT0024924 Glycine max miR395l 12 80
gma-miR395k MIMAT0024923 Glycine max miR395k 12 80
gma-miR395j MIMAT0024922 Glycine max miR395j 12 80
gma-miR395i MIMAT0024921 Glycine max miR395i 12 80
gma-miR395h MIMAT0024920 Glycine max miR395h 12 80
osa-miR6249a MIMAT0024871 Oryza sativa miR6249a 12 80
hvu-miR6202 MIMAT0024830 Hordeum vulgare miR6202 12 80
cgr-miR-205 MIMAT0023845 Cricetulus griseus miR-205 12 80
ath-miR5999 MIMAT0023525 Arabidopsis thaliana miR5999 12 80
hco-miR-5969 MIMAT0023476 Haemonchus contortus miR-5969 12 80
sha-miR-205 MIMAT0022812 Sarcophilus harrisii miR-205 12 80
ath-miR5659 MIMAT0022432 Arabidopsis thaliana miR5659 12 80
aca-miR-205b MIMAT0021856 Anolis carolinensis miR-205b 12 80
aca-miR-205a MIMAT0021855 Anolis carolinensis miR-205a 12 80
gma-miR5376 MIMAT0021617 Glycine max miR5376 12 80
mtr-miR5227 MIMAT0021186 Medicago truncatula miR5227 12 80
pma-miR-205b MIMAT0019519 Petromyzon marinus miR-205b 12 80
pma-miR-205a-5p MIMAT0019517 Petromyzon marinus miR-205a-5p 12 80
hsa-miR-676-5p MIMAT0018203 Homo sapiens miR-676-5p 12 80
hsa-miR-3616-5p MIMAT0017995 Homo sapiens miR-3616-5p 12 80
cin-miR-4079-5p MIMAT0016647 Ciona intestinalis miR-4079-5p 12 80
rno-miR-3551-5p MIMAT0017809 Rattus norvegicus miR-3551-5p 12 80
gga-miR-3533 MIMAT0016384 Gallus gallus miR-3533 12 80
ahy-miR160-3p MIMAT0016323 Arachis hypogaea miR160-3p 12 80
ppy-miR-205 MIMAT0015798 Pongo pygmaeus miR-205 12 80
aly-miR163-3p.1 MIMAT0017680 Arabidopsis lyrata miR163-3p.1 12 80
aly-miR835-3p MIMAT0017620 Arabidopsis lyrata miR835-3p 12 80
bmo-miR-3374-5p MIMAT0015563 Bombyx mori miR-3374-5p 12 80
bmo-miR-3252 MIMAT0015435 Bombyx mori miR-3252 12 80
tgu-miR-205 MIMAT0014616 Taeniopygia guttata miR-205 12 80
eca-miR-205 MIMAT0012962 Equus caballus miR-205 12 80
mdo-miR-205a MIMAT0012749 Monodelphis domestica miR-205a 12 80
iltv-miR-I5-3p MIMAT0012729 Infectious laryngotracheitis miR-I5-3p 12 80
bmo-miR-2842 MIMAT0013761 Bombyx mori miR-2842 12 80
sme-miR-2200-5p MIMAT0011421 Schmidtea mediterranea miR-2200-5p 12 80
cfa-miR-205 MIMAT0009845 Canis familiaris miR-205 12 80
xla-miR-205 MIMAT0011142 Xenopus laevis miR-205 12 80
mml-miR-205 MIMAT0006236 Macaca mulatta miR-205 12 80
oan-miR-1392-5p MIMAT0007187 Ornithorhynchus anatinus miR-1392-5p 12 80
oan-miR-205-5p MIMAT0006866 Ornithorhynchus anatinus miR-205-5p 12 80
ppt-miR902d-3p MIMAT0005072 Physcomitrella patens miR902d-3p 12 80
mdv2-miR-M29-5p MIMAT0004476 Mareks disease miR-M29-5p 12 80
osa-miR814c MIMAT0004057 Oryza sativa miR814c 12 80
osa-miR814b MIMAT0004056 Oryza sativa miR814b 12 80
osa-miR814a MIMAT0004055 Oryza sativa miR814a 12 80
sme-miR-281-5p MIMAT0004012 Schmidtea mediterranea miR-281-5p 12 80
sme-miR-747-3p MIMAT0012117 Schmidtea mediterranea miR-747-3p 12 80
osa-miR395o MIMAT0003872 Oryza sativa miR395o 12 80
mtr-miR395o MIMAT0003868 Medicago truncatula miR395o 12 80
mtr-miR395n MIMAT0003867 Medicago truncatula miR395n 12 80
mtr-miR395m MIMAT0003866 Medicago truncatula miR395m 12 80
mtr-miR395l MIMAT0003865 Medicago truncatula miR395l 12 80
mtr-miR395j MIMAT0003863 Medicago truncatula miR395j 12 80
mtr-miR395i MIMAT0003862 Medicago truncatula miR395i 12 80
mtr-miR395h MIMAT0003861 Medicago truncatula miR395h 12 80
mtr-miR395f MIMAT0003859 Medicago truncatula miR395f 12 80
mtr-miR395e MIMAT0003858 Medicago truncatula miR395e 12 80
mtr-miR395d MIMAT0003857 Medicago truncatula miR395d 12 80
mtr-miR395c MIMAT0003856 Medicago truncatula miR395c 12 80
xtr-miR-205a MIMAT0003697 Xenopus tropicalis miR-205a 12 80
xtr-miR-205b MIMAT0003622 Xenopus tropicalis miR-205b 12 80
bta-miR-205 MIMAT0003545 Bos taurus miR-205 12 80
tni-miR-205 MIMAT0002966 Tetraodon nigroviridis miR-205 12 80
fru-miR-205 MIMAT0002965 Fugu rubripes miR-205 12 80
mne-miR-205 MIMAT0002546 Macaca nemestrina miR-205 12 80
lla-miR-205 MIMAT0002545 Lagothrix lagotricha miR-205 12 80
ptr-miR-205 MIMAT0002544 Pan troglodytes miR-205 12 80
ppa-miR-205 MIMAT0002543 Pan paniscus miR-205 12 80
age-miR-205 MIMAT0002542 Ateles geoffroyi miR-205 12 80
ggo-miR-205 MIMAT0002541 Gorilla gorilla miR-205 12 80
ssc-miR-205 MIMAT0002146 Sus scrofa miR-205 12 80
sbi-miR395f MIMAT0001757 Sorghum bicolor miR395f 12 80
mtr-miR395b MIMAT0001649 Medicago truncatula miR395b 12 80
mtr-miR395a MIMAT0001648 Medicago truncatula miR395a 12 80
dre-miR-205-5p MIMAT0001280 Danio rerio miR-205-5p 12 80
gga-miR-205a MIMAT0001184 Gallus gallus miR-205a 12 80
gga-miR-205b MIMAT0001164 Gallus gallus miR-205b 12 80
rno-miR-205 MIMAT0000878 Rattus norvegicus miR-205 12 80
hsa-miR-205-5p MIMAT0000266 Homo sapiens miR-205-5p 12 80
mmu-miR-205-5p MIMAT0000238 Mus musculus miR-205-5p 12 80
>ppc-miR-8364t-5p MIMAT0033284 Pristionchus pacificus
miR-8364t-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364s-5p MIMAT0033270 Pristionchus pacificus
miR-8364s-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364r-5p MIMAT0033262 Pristionchus pacificus
miR-8364r-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364e-5p MIMAT0033260 Pristionchus pacificus
miR-8364e-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364i-5p MIMAT0033216 Pristionchus pacificus
miR-8364i-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364m-5p MIMAT0033188 Pristionchus pacificus
miR-8364m-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364a-5p MIMAT0033176 Pristionchus pacificus
miR-8364a-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364w-5p MIMAT0033161 Pristionchus pacificus
miR-8364w-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364g-5p MIMAT0033119 Pristionchus pacificus
miR-8364g-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364f-5p MIMAT0033109 Pristionchus pacificus
miR-8364f-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364b-5p MIMAT0033081 Pristionchus pacificus
miR-8364b-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364n-5p MIMAT0033045 Pristionchus pacificus
miR-8364n-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364c-5p MIMAT0033030 Pristionchus pacificus
miR-8364c-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>ppc-miR-8364j-5p MIMAT0033026 Pristionchus pacificus
miR-8364j-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>mml-miR-7186-3p MIMAT0028327 Macaca mulatta miR-7186-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tcttcat 7
|||||||
Sbjct: 1 tcttcat 7
>mmu-miR-7013-5p MIMAT0027930 Mus musculus miR-7013-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcttcat 7
|||||||
Sbjct: 8 tcttcat 2
>mtr-miR5293 MIMAT0021359 Medicago truncatula miR5293
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tcttcat 7
|||||||
Sbjct: 8 tcttcat 2
>bta-miR-3533 MIMAT0036975 Bos taurus miR-3533
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>oha-miR-205b-5p MIMAT0036817 Ophiophagus hannah miR-205b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 2 cttcat 7
>oha-miR-205a-5p MIMAT0036815 Ophiophagus hannah miR-205a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>efu-miR-205 MIMAT0035156 Eptesicus fuscus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>efu-miR-9218 MIMAT0034810 Eptesicus fuscus miR-9218
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 8 tcttca 3
>eca-miR-8910 MIMAT0034438 Equus caballus miR-8910
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>ppc-miR-8345-5p MIMAT0033236 Pristionchus pacificus miR-8345-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>ppc-miR-8332-3p MIMAT0033209 Pristionchus pacificus miR-8332-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>ppc-miR-8364h-5p MIMAT0033063 Pristionchus pacificus
miR-8364h-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 2 cttcat 7
>ppc-miR-8364d-5p MIMAT0032910 Pristionchus pacificus
miR-8364d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ssa-miR-205b-5p MIMAT0032495 Salmo salar miR-205b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ssa-miR-205a-5p MIMAT0032492 Salmo salar miR-205a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>hbv-miR-B8-3p MIMAT0031768 Herpes B miR-B8-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 3 tcttca 8
>osa-miR6249b MIMAT0031378 Oryza sativa miR6249b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 8 tcttca 3
>hsa-miR-8060 MIMAT0030987 Homo sapiens miR-8060
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 8 cttcat 3
>hsa-miR-7843-3p MIMAT0030412 Homo sapiens miR-7843-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>bdi-miR7723b-3p MIMAT0030255 Brachypodium distachyon
miR7723b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>ipu-miR-205 MIMAT0029460 Ictalurus punctatus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>mdo-miR-7291-3p MIMAT0028567 Monodelphis domestica miR-7291-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>ccr-miR-205 MIMAT0026263 Cyprinus carpio miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>mdm-miR169f MIMAT0026068 Malus domestica miR169f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>mdm-miR169e MIMAT0026067 Malus domestica miR169e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>mmu-miR-7116-5p MIMAT0028129 Mus musculus miR-7116-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>mmu-miR-7094-1-5p MIMAT0028094 Mus musculus miR-7094-1-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 8 tcttca 3
>hsa-miR-6754-3p MIMAT0027409 Homo sapiens miR-6754-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>gga-miR-6699-5p MIMAT0025808 Gallus gallus miR-6699-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>hsa-miR-6515-3p MIMAT0025487 Homo sapiens miR-6515-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 3 tcttca 8
>gma-miR395m MIMAT0024925 Glycine max miR395m
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>gma-miR395l MIMAT0024924 Glycine max miR395l
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>gma-miR395k MIMAT0024923 Glycine max miR395k
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>gma-miR395j MIMAT0024922 Glycine max miR395j
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>gma-miR395i MIMAT0024921 Glycine max miR395i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>gma-miR395h MIMAT0024920 Glycine max miR395h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>osa-miR6249a MIMAT0024871 Oryza sativa miR6249a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 8 tcttca 3
>hvu-miR6202 MIMAT0024830 Hordeum vulgare miR6202
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>cgr-miR-205 MIMAT0023845 Cricetulus griseus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ath-miR5999 MIMAT0023525 Arabidopsis thaliana miR5999
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>hco-miR-5969 MIMAT0023476 Haemonchus contortus miR-5969
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>sha-miR-205 MIMAT0022812 Sarcophilus harrisii miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ath-miR5659 MIMAT0022432 Arabidopsis thaliana miR5659
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 8 cttcat 3
>aca-miR-205b MIMAT0021856 Anolis carolinensis miR-205b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>aca-miR-205a MIMAT0021855 Anolis carolinensis miR-205a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>gma-miR5376 MIMAT0021617 Glycine max miR5376
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>mtr-miR5227 MIMAT0021186 Medicago truncatula miR5227
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>pma-miR-205b MIMAT0019519 Petromyzon marinus miR-205b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>pma-miR-205a-5p MIMAT0019517 Petromyzon marinus miR-205a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>hsa-miR-676-5p MIMAT0018203 Homo sapiens miR-676-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>hsa-miR-3616-5p MIMAT0017995 Homo sapiens miR-3616-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>cin-miR-4079-5p MIMAT0016647 Ciona intestinalis miR-4079-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>rno-miR-3551-5p MIMAT0017809 Rattus norvegicus miR-3551-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>gga-miR-3533 MIMAT0016384 Gallus gallus miR-3533
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>ahy-miR160-3p MIMAT0016323 Arachis hypogaea miR160-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 8 cttcat 3
>ppy-miR-205 MIMAT0015798 Pongo pygmaeus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>aly-miR163-3p.1 MIMAT0017680 Arabidopsis lyrata miR163-3p.1
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>aly-miR835-3p MIMAT0017620 Arabidopsis lyrata miR835-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>bmo-miR-3374-5p MIMAT0015563 Bombyx mori miR-3374-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>bmo-miR-3252 MIMAT0015435 Bombyx mori miR-3252
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>tgu-miR-205 MIMAT0014616 Taeniopygia guttata miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>eca-miR-205 MIMAT0012962 Equus caballus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>mdo-miR-205a MIMAT0012749 Monodelphis domestica miR-205a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>iltv-miR-I5-3p MIMAT0012729 Infectious laryngotracheitis
miR-I5-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>bmo-miR-2842 MIMAT0013761 Bombyx mori miR-2842
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>sme-miR-2200-5p MIMAT0011421 Schmidtea mediterranea miR-2200-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>cfa-miR-205 MIMAT0009845 Canis familiaris miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>xla-miR-205 MIMAT0011142 Xenopus laevis miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>mml-miR-205 MIMAT0006236 Macaca mulatta miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>oan-miR-1392-5p MIMAT0007187 Ornithorhynchus anatinus
miR-1392-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>oan-miR-205-5p MIMAT0006866 Ornithorhynchus anatinus miR-205-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ppt-miR902d-3p MIMAT0005072 Physcomitrella patens miR902d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mdv2-miR-M29-5p MIMAT0004476 Mareks disease miR-M29-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tcttca 6
||||||
Sbjct: 1 tcttca 6
>osa-miR814c MIMAT0004057 Oryza sativa miR814c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>osa-miR814b MIMAT0004056 Oryza sativa miR814b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>osa-miR814a MIMAT0004055 Oryza sativa miR814a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>sme-miR-281-5p MIMAT0004012 Schmidtea mediterranea miR-281-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tcttca 6
||||||
Sbjct: 6 tcttca 1
>sme-miR-747-3p MIMAT0012117 Schmidtea mediterranea miR-747-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 1 cttcat 6
>osa-miR395o MIMAT0003872 Oryza sativa miR395o
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395o MIMAT0003868 Medicago truncatula miR395o
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395n MIMAT0003867 Medicago truncatula miR395n
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395m MIMAT0003866 Medicago truncatula miR395m
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395l MIMAT0003865 Medicago truncatula miR395l
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395j MIMAT0003863 Medicago truncatula miR395j
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395i MIMAT0003862 Medicago truncatula miR395i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395h MIMAT0003861 Medicago truncatula miR395h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395f MIMAT0003859 Medicago truncatula miR395f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395e MIMAT0003858 Medicago truncatula miR395e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395d MIMAT0003857 Medicago truncatula miR395d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395c MIMAT0003856 Medicago truncatula miR395c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>xtr-miR-205a MIMAT0003697 Xenopus tropicalis miR-205a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>xtr-miR-205b MIMAT0003622 Xenopus tropicalis miR-205b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>bta-miR-205 MIMAT0003545 Bos taurus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>tni-miR-205 MIMAT0002966 Tetraodon nigroviridis miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>fru-miR-205 MIMAT0002965 Fugu rubripes miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>mne-miR-205 MIMAT0002546 Macaca nemestrina miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>lla-miR-205 MIMAT0002545 Lagothrix lagotricha miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ptr-miR-205 MIMAT0002544 Pan troglodytes miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ppa-miR-205 MIMAT0002543 Pan paniscus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>age-miR-205 MIMAT0002542 Ateles geoffroyi miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ggo-miR-205 MIMAT0002541 Gorilla gorilla miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>ssc-miR-205 MIMAT0002146 Sus scrofa miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>sbi-miR395f MIMAT0001757 Sorghum bicolor miR395f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395b MIMAT0001649 Medicago truncatula miR395b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>mtr-miR395a MIMAT0001648 Medicago truncatula miR395a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 cttcat 7
||||||
Sbjct: 6 cttcat 1
>dre-miR-205-5p MIMAT0001280 Danio rerio miR-205-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>gga-miR-205a MIMAT0001184 Gallus gallus miR-205a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>gga-miR-205b MIMAT0001164 Gallus gallus miR-205b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>rno-miR-205 MIMAT0000878 Rattus norvegicus miR-205
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>hsa-miR-205-5p MIMAT0000266 Homo sapiens miR-205-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
>mmu-miR-205-5p MIMAT0000238 Mus musculus miR-205-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 cttcat 7
||||||
Sbjct: 3 cttcat 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 174
Number of extensions: 157
Number of successful extensions: 125
Number of sequences better than 100.0: 125
Number of HSP's gapped: 125
Number of HSP's successfully gapped: 125
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
