BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tumv-miR-s23
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gga-miR-6580-3p MIMAT0025668 Gallus gallus miR-6580-3p                 14      20
hbr-miR159b MIMAT0025294 Hevea brasiliensis miR159b                    14      20
ggo-miR-448 MIMAT0024209 Gorilla gorilla miR-448                       14      20
ppy-miR-448 MIMAT0015890 Pongo pygmaeus miR-448                        14      20
eca-miR-448 MIMAT0013218 Equus caballus miR-448                        14      20
bta-miR-448 MIMAT0009319 Bos taurus miR-448                            14      20
ptr-miR-448 MIMAT0008148 Pan troglodytes miR-448                       14      20
mml-miR-448 MIMAT0006329 Macaca mulatta miR-448                        14      20
mmu-miR-669i MIMAT0005840 Mus musculus miR-669i                        14      20
mmu-miR-669j MIMAT0005838 Mus musculus miR-669j                        14      20
cfa-miR-448 MIMAT0001535 Canis familiaris miR-448                      14      20
rno-miR-448-3p MIMAT0001534 Rattus norvegicus miR-448-3p               14      20
mmu-miR-448-3p MIMAT0001533 Mus musculus miR-448-3p                    14      20
hsa-miR-448 MIMAT0001532 Homo sapiens miR-448                          14      20
tae-miR9779 MIMAT0036993 Triticum aestivum miR9779                     12      80
chi-miR-491-3p MIMAT0036252 Capra hircus miR-491-3p                    12      80
bra-miR9562-5p MIMAT0035681 Brassica rapa miR9562-5p                   12      80
efu-miR-9363 MIMAT0035177 Eptesicus fuscus miR-9363                    12      80
cfa-miR-8908e MIMAT0034426 Canis familiaris miR-8908e                  12      80
pxy-miR-8507-3p MIMAT0033725 Plutella xylostella miR-8507-3p           12      80
ppc-miR-84d-3p MIMAT0032921 Pristionchus pacificus miR-84d-3p          12      80
prd-miR-7874-3p MIMAT0030493 Panagrellus redivivus miR-7874-3p         12      80
mtr-miR2652m MIMAT0029965 Medicago truncatula miR2652m                 12      80
nta-miR6160 MIMAT0024772 Nicotiana tabacum miR6160                     12      80
cgr-miR-300 MIMAT0023889 Cricetulus griseus miR-300                    12      80
mmu-miR-5136 MIMAT0020647 Mus musculus miR-5136                        12      80
hsa-miR-4633-5p MIMAT0019689 Homo sapiens miR-4633-5p                  12      80
pma-miR-4618 MIMAT0019652 Petromyzon marinus miR-4618                  12      80
ppy-miR-586 MIMAT0016028 Pongo pygmaeus miR-586                        12      80
ppy-miR-491-3p MIMAT0015912 Pongo pygmaeus miR-491-3p                  12      80
bmo-miR-3371 MIMAT0015558 Bombyx mori miR-3371                         12      80
bmo-miR-3249 MIMAT0015431 Bombyx mori miR-3249                         12      80
mmu-miR-3088-5p MIMAT0014897 Mus musculus miR-3088-5p                  12      80
eca-miR-491-3p MIMAT0013117 Equus caballus miR-491-3p                  12      80
mtr-miR2652l MIMAT0013435 Medicago truncatula miR2652l                 12      80
mtr-miR2652k MIMAT0013434 Medicago truncatula miR2652k                 12      80
mtr-miR2652j MIMAT0013433 Medicago truncatula miR2652j                 12      80
mtr-miR2652i MIMAT0013432 Medicago truncatula miR2652i                 12      80
mtr-miR2652h MIMAT0013431 Medicago truncatula miR2652h                 12      80
mtr-miR2652g MIMAT0013430 Medicago truncatula miR2652g                 12      80
mtr-miR2652f MIMAT0013429 Medicago truncatula miR2652f                 12      80
mtr-miR2652e MIMAT0013428 Medicago truncatula miR2652e                 12      80
mtr-miR2652d MIMAT0013427 Medicago truncatula miR2652d                 12      80
mtr-miR2652c MIMAT0013426 Medicago truncatula miR2652c                 12      80
mtr-miR2652b MIMAT0013425 Medicago truncatula miR2652b                 12      80
mtr-miR2652a MIMAT0013424 Medicago truncatula miR2652a                 12      80
dps-miR-2543a-3p MIMAT0012345 Drosophila pseudoobscura miR-2543a-3p    12      80
spu-miR-22 MIMAT0009655 Strongylocentrotus purpuratus miR-22           12      80
ptr-miR-586 MIMAT0008258 Pan troglodytes miR-586                       12      80
ptr-miR-491 MIMAT0008166 Pan troglodytes miR-491                       12      80
cfa-miR-491 MIMAT0006601 Canis familiaris miR-491                      12      80
mml-miR-586 MIMAT0006447 Macaca mulatta miR-586                        12      80
mml-miR-491-3p MIMAT0006353 Macaca mulatta miR-491-3p                  12      80
gga-miR-1734 MIMAT0007636 Gallus gallus miR-1734                       12      80
oan-miR-1421ak-3p MIMAT0007310 Ornithorhynchus anatinus miR-1421...    12      80
oan-miR-1421ah-3p MIMAT0007304 Ornithorhynchus anatinus miR-1421...    12      80
mdv1-miR-M12-3p MIMAT0005984 Mareks disease miR-M12-3p                 12      80
oan-miR-1421w-3p MIMAT0007239 Ornithorhynchus anatinus miR-1421w-3p    12      80
oan-miR-1421p-3p MIMAT0007079 Ornithorhynchus anatinus miR-1421p-3p    12      80
oan-miR-1421f-3p MIMAT0006974 Ornithorhynchus anatinus miR-1421f-3p    12      80
mmu-miR-669h-3p MIMAT0005842 Mus musculus miR-669h-3p                  12      80
mmu-miR-669k-3p MIMAT0005831 Mus musculus miR-669k-3p                  12      80
ath-miR862-3p MIMAT0004308 Arabidopsis thaliana miR862-3p              12      80
xtr-miR-20a-3p MIMAT0003670 Xenopus tropicalis miR-20a-3p              12      80
mmu-miR-491-3p MIMAT0017255 Mus musculus miR-491-3p                    12      80
hsa-miR-586 MIMAT0003252 Homo sapiens miR-586                          12      80
hsa-miR-491-3p MIMAT0004765 Homo sapiens miR-491-3p                    12      80
rno-miR-300-3p MIMAT0000902 Rattus norvegicus miR-300-3p               12      80
mmu-miR-300-3p MIMAT0000378 Mus musculus miR-300-3p                    12      80
>gga-miR-6580-3p MIMAT0025668 Gallus gallus miR-6580-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>hbr-miR159b MIMAT0025294 Hevea brasiliensis miR159b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>ggo-miR-448 MIMAT0024209 Gorilla gorilla miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>ppy-miR-448 MIMAT0015890 Pongo pygmaeus miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>eca-miR-448 MIMAT0013218 Equus caballus miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>bta-miR-448 MIMAT0009319 Bos taurus miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>ptr-miR-448 MIMAT0008148 Pan troglodytes miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>mml-miR-448 MIMAT0006329 Macaca mulatta miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>mmu-miR-669i MIMAT0005840 Mus musculus miR-669i
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 1 tgcatat 7
>mmu-miR-669j MIMAT0005838 Mus musculus miR-669j
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 1 tgcatat 7
>cfa-miR-448 MIMAT0001535 Canis familiaris miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>rno-miR-448-3p MIMAT0001534 Rattus norvegicus miR-448-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>mmu-miR-448-3p MIMAT0001533 Mus musculus miR-448-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>hsa-miR-448 MIMAT0001532 Homo sapiens miR-448
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tgcatat 7
         |||||||
Sbjct: 2 tgcatat 8
>tae-miR9779 MIMAT0036993 Triticum aestivum miR9779
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>chi-miR-491-3p MIMAT0036252 Capra hircus miR-491-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>bra-miR9562-5p MIMAT0035681 Brassica rapa miR9562-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>efu-miR-9363 MIMAT0035177 Eptesicus fuscus miR-9363
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 8 gcatat 3
>cfa-miR-8908e MIMAT0034426 Canis familiaris miR-8908e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>pxy-miR-8507-3p MIMAT0033725 Plutella xylostella miR-8507-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 3 gcatat 8
>ppc-miR-84d-3p MIMAT0032921 Pristionchus pacificus miR-84d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 1 gcatat 6
>prd-miR-7874-3p MIMAT0030493 Panagrellus redivivus miR-7874-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 2 gcatat 7
>mtr-miR2652m MIMAT0029965 Medicago truncatula miR2652m
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>nta-miR6160 MIMAT0024772 Nicotiana tabacum miR6160
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 1 gcatat 6
>cgr-miR-300 MIMAT0023889 Cricetulus griseus miR-300
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mmu-miR-5136 MIMAT0020647 Mus musculus miR-5136
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 6 gcatat 1
>hsa-miR-4633-5p MIMAT0019689 Homo sapiens miR-4633-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 6 gcatat 1
>pma-miR-4618 MIMAT0019652 Petromyzon marinus miR-4618
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 3 tgcata 8
>ppy-miR-586 MIMAT0016028 Pongo pygmaeus miR-586
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>ppy-miR-491-3p MIMAT0015912 Pongo pygmaeus miR-491-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>bmo-miR-3371 MIMAT0015558 Bombyx mori miR-3371
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>bmo-miR-3249 MIMAT0015431 Bombyx mori miR-3249
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mmu-miR-3088-5p MIMAT0014897 Mus musculus miR-3088-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>eca-miR-491-3p MIMAT0013117 Equus caballus miR-491-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>mtr-miR2652l MIMAT0013435 Medicago truncatula miR2652l
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652k MIMAT0013434 Medicago truncatula miR2652k
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652j MIMAT0013433 Medicago truncatula miR2652j
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652i MIMAT0013432 Medicago truncatula miR2652i
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652h MIMAT0013431 Medicago truncatula miR2652h
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652g MIMAT0013430 Medicago truncatula miR2652g
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652f MIMAT0013429 Medicago truncatula miR2652f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652e MIMAT0013428 Medicago truncatula miR2652e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652d MIMAT0013427 Medicago truncatula miR2652d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652c MIMAT0013426 Medicago truncatula miR2652c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652b MIMAT0013425 Medicago truncatula miR2652b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mtr-miR2652a MIMAT0013424 Medicago truncatula miR2652a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>dps-miR-2543a-3p MIMAT0012345 Drosophila pseudoobscura
         miR-2543a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>spu-miR-22 MIMAT0009655 Strongylocentrotus purpuratus miR-22
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 7 gcatat 2
>ptr-miR-586 MIMAT0008258 Pan troglodytes miR-586
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>ptr-miR-491 MIMAT0008166 Pan troglodytes miR-491
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>cfa-miR-491 MIMAT0006601 Canis familiaris miR-491
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>mml-miR-586 MIMAT0006447 Macaca mulatta miR-586
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 3 tgcata 8
>mml-miR-491-3p MIMAT0006353 Macaca mulatta miR-491-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>gga-miR-1734 MIMAT0007636 Gallus gallus miR-1734
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 6 gcatat 1
>oan-miR-1421ak-3p MIMAT0007310 Ornithorhynchus anatinus
         miR-1421ak-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 3 tgcata 8
>oan-miR-1421ah-3p MIMAT0007304 Ornithorhynchus anatinus
         miR-1421ah-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>mdv1-miR-M12-3p MIMAT0005984 Mareks disease miR-M12-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>oan-miR-1421w-3p MIMAT0007239 Ornithorhynchus anatinus
         miR-1421w-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>oan-miR-1421p-3p MIMAT0007079 Ornithorhynchus anatinus
         miR-1421p-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>oan-miR-1421f-3p MIMAT0006974 Ornithorhynchus anatinus
         miR-1421f-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 1 tgcata 6
>mmu-miR-669h-3p MIMAT0005842 Mus musculus miR-669h-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 3 tgcata 8
>mmu-miR-669k-3p MIMAT0005831 Mus musculus miR-669k-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 3 tgcata 8
>ath-miR862-3p MIMAT0004308 Arabidopsis thaliana miR862-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 gcatat 7
         ||||||
Sbjct: 6 gcatat 1
>xtr-miR-20a-3p MIMAT0003670 Xenopus tropicalis miR-20a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 3 tgcata 8
>mmu-miR-491-3p MIMAT0017255 Mus musculus miR-491-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>hsa-miR-586 MIMAT0003252 Homo sapiens miR-586
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>hsa-miR-491-3p MIMAT0004765 Homo sapiens miR-491-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 8 tgcata 3
>rno-miR-300-3p MIMAT0000902 Rattus norvegicus miR-300-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
>mmu-miR-300-3p MIMAT0000378 Mus musculus miR-300-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgcata 6
         ||||||
Sbjct: 6 tgcata 1
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 146
Number of extensions: 132
Number of successful extensions: 72
Number of sequences better than 100.0: 69
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 72
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)