VIRmiRNA

BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= dev-miR-d1-5p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ssa-miR-205a-2-3p MIMAT0032494 Salmo salar miR-205a-2-3p               14      20
ssa-miR-205a-3p MIMAT0032493 Salmo salar miR-205a-3p                   14      20
dev-miR-D1-5p MIMAT0028169 Duck enteritis miR-D1-5p                    14      20
hsa-miR-6716-5p MIMAT0025844 Homo sapiens miR-6716-5p                  14      20
ptc-miR6427-3p MIMAT0025228 Populus trichocarpa miR6427-3p             14      20
ata-miR2118b-3p MIMAT0037221 Aegilops tauschii miR2118b-3p             12      80
ata-miR2118a-3p MIMAT0037181 Aegilops tauschii miR2118a-3p             12      80
ata-miR166b-5p MIMAT0037126 Aegilops tauschii miR166b-5p               12      80
oha-miR-204-1-3p MIMAT0036813 Ophiophagus hannah miR-204-1-3p          12      80
chi-miR-450-3p MIMAT0036236 Capra hircus miR-450-3p                    12      80
chi-miR-204-3p MIMAT0036051 Capra hircus miR-204-3p                    12      80
eca-miR-8965 MIMAT0034500 Equus caballus miR-8965                      12      80
cfa-miR-8808 MIMAT0034298 Canis familiaris miR-8808                    12      80
gra-miR482c MIMAT0034205 Gossypium raimondii miR482c                   12      80
ppc-miR-8297-5p MIMAT0033111 Pristionchus pacificus miR-8297-5p        12      80
ppc-miR-8263-3p MIMAT0033011 Pristionchus pacificus miR-8263-3p        12      80
cel-miR-8187-5p MIMAT0032787 Caenorhabditis elegans miR-8187-5p        12      80
ssa-miR-459-3p MIMAT0032650 Salmo salar miR-459-3p                     12      80
cpa-miR172b MIMAT0031811 Carica papaya miR172b                         12      80
cpa-miR172a MIMAT0031810 Carica papaya miR172a                         12      80
bbe-miR-4873-5p MIMAT0031696 Branchiostoma belcheri miR-4873-5p        12      80
hsa-miR-7977 MIMAT0031180 Homo sapiens miR-7977                        12      80
bdi-miR7763-3p MIMAT0030273 Brachypodium distachyon miR7763-3p         12      80
bdi-miR395o-5p MIMAT0030093 Brachypodium distachyon miR395o-5p         12      80
mmu-miR-7684-5p MIMAT0029890 Mus musculus miR-7684-5p                  12      80
gga-miR-7451-5p MIMAT0029056 Gallus gallus miR-7451-5p                 12      80
mdo-miR-7249-3p MIMAT0028465 Monodelphis domestica miR-7249-3p         12      80
mdo-miR-7244-5p MIMAT0028454 Monodelphis domestica miR-7244-5p         12      80
ccr-miR-459-3p MIMAT0026305 Cyprinus carpio miR-459-3p                 12      80
mmu-miR-7074-5p MIMAT0028054 Mus musculus miR-7074-5p                  12      80
mmu-miR-7052-5p MIMAT0028008 Mus musculus miR-7052-5p