BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ohv2-miR-61-1
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mmu-miR-6989-5p MIMAT0027880 Mus musculus miR-6989-5p                  14      20
hsa-miR-6810-5p MIMAT0027520 Homo sapiens miR-6810-5p                  14      20
gga-miR-6615-5p MIMAT0025710 Gallus gallus miR-6615-5p                 14      20
hsa-miR-3191-3p MIMAT0015075 Homo sapiens miR-3191-3p                  14      20
peu-miR2916 MIMAT0012884 Populus euphratica miR2916                    14      20
tca-miR-317-5p MIMAT0019130 Tribolium castaneum miR-317-5p             14      20
ath-miR447c-3p MIMAT0002115 Arabidopsis thaliana miR447c-3p            14      20
ath-miR447b MIMAT0002114 Arabidopsis thaliana miR447b                  14      20
ath-miR447a-3p MIMAT0002113 Arabidopsis thaliana miR447a-3p            14      20
tch-miR-491-5p MIMAT0036566 Tupaia chinensis miR-491-5p                12      80
chi-miR-491-5p MIMAT0036251 Capra hircus miR-491-5p                    12      80
rno-miR-450b-3p MIMAT0035747 Rattus norvegicus miR-450b-3p             12      80
efu-miR-9272 MIMAT0034905 Eptesicus fuscus miR-9272                    12      80
gra-miR8735 MIMAT0034147 Gossypium raimondii miR8735                   12      80
ssa-miR-204-4-3p MIMAT0032491 Salmo salar miR-204-4-3p                 12      80
ssa-miR-204-3-3p MIMAT0032490 Salmo salar miR-204-3-3p                 12      80
mmu-miR-8108 MIMAT0031413 Mus musculus miR-8108                        12      80
stu-miR408b-5p MIMAT0031339 Solanum tuberosum miR408b-5p               12      80
hsa-miR-8089 MIMAT0031016 Homo sapiens miR-8089                        12      80
tgu-miR-7645-5p MIMAT0029790 Taeniopygia guttata miR-7645-5p           12      80
mmu-miR-7118-5p MIMAT0028133 Mus musculus miR-7118-5p                  12      80
mmu-miR-7053-5p MIMAT0028010 Mus musculus miR-7053-5p                  12      80
mmu-miR-7030-5p MIMAT0027964 Mus musculus miR-7030-5p                  12      80
mmu-miR-7005-5p MIMAT0027914 Mus musculus miR-7005-5p                  12      80
mmu-miR-7003-5p MIMAT0027910 Mus musculus miR-7003-5p                  12      80
mmu-miR-6975-5p MIMAT0027852 Mus musculus miR-6975-5p                  12      80
hsa-miR-6780b-5p MIMAT0027572 Homo sapiens miR-6780b-5p                12      80
hsa-miR-6825-5p MIMAT0027550 Homo sapiens miR-6825-5p                  12      80
hsa-miR-6793-3p MIMAT0027487 Homo sapiens miR-6793-3p                  12      80
gga-miR-6622-3p MIMAT0025825 Gallus gallus miR-6622-3p                 12      80
mmu-miR-6356 MIMAT0025099 Mus musculus miR-6356                        12      80
hme-miR-133 MIMAT0024938 Heliconius melpomene miR-133                  12      80
hvu-miR6194 MIMAT0024820 Hordeum vulgare miR6194                       12      80
mml-miR-4667 MIMAT0024333 Macaca mulatta miR-4667                      12      80
ggo-miR-491 MIMAT0024196 Gorilla gorilla miR-491                       12      80
ptr-miR-4667 MIMAT0024060 Pan troglodytes miR-4667                     12      80
hco-miR-5910 MIMAT0023366 Haemonchus contortus miR-5910                12      80
ola-miR-133-3p MIMAT0022560 Oryzias latipes miR-133-3p                 12      80
rgl-miR164 MIMAT0023004 Rehmannia glutinosa miR164                     12      80
sbi-miR5564a MIMAT0022241 Sorghum bicolor miR5564a                     12      80
sly-miR5300 MIMAT0020764 Solanum lycopersicum miR5300                  12      80
bdi-miR5054 MIMAT0020763 Brachypodium distachyon miR5054               12      80
mmu-miR-3572-5p MIMAT0022986 Mus musculus miR-3572-5p                  12      80
ssc-miR-491 MIMAT0020592 Sus scrofa miR-491                            12      80
gma-miR5043 MIMAT0021074 Glycine max miR5043                           12      80
sko-miR-4825-5p MIMAT0020030 Saccoglossus kowalevskii miR-4825-5p      12      80
hsa-miR-4725-3p MIMAT0019844 Homo sapiens miR-4725-3p                  12      80
hsa-miR-4700-5p MIMAT0019796 Homo sapiens miR-4700-5p                  12      80
hsa-miR-1343-5p MIMAT0027038 Homo sapiens miR-1343-5p                  12      80
hsa-miR-4667-5p MIMAT0019743 Homo sapiens miR-4667-5p                  12      80
hsa-miR-4450 MIMAT0018971 Homo sapiens miR-4450                        12      80
ppy-miR-939 MIMAT0016139 Pongo pygmaeus miR-939                        12      80
ppy-miR-612 MIMAT0016053 Pongo pygmaeus miR-612                        12      80
ppy-miR-491-5p MIMAT0015911 Pongo pygmaeus miR-491-5p                  12      80
tgu-miR-2954-3p MIMAT0014474 Taeniopygia guttata miR-2954-3p           12      80
gga-miR-2954 MIMAT0014448 Gallus gallus miR-2954                       12      80
bta-miR-2889 MIMAT0013847 Bos taurus miR-2889                          12      80
eca-miR-491-5p MIMAT0013116 Equus caballus miR-491-5p                  12      80
bta-miR-2389 MIMAT0011942 Bos taurus miR-2389                          12      80
bta-miR-1343-5p MIMAT0011839 Bos taurus miR-1343-5p                    12      80
ppc-miR-2247 MIMAT0011735 Pristionchus pacificus miR-2247              12      80
bfl-miR-133 MIMAT0009484 Branchiostoma floridae miR-133                12      80
bta-miR-491 MIMAT0009332 Bos taurus miR-491                            12      80
ptr-miR-939 MIMAT0008346 Pan troglodytes miR-939                       12      80
cel-miR-1829a-5p MIMAT0015267 Caenorhabditis elegans miR-1829a-5p      12      80
mml-miR-939 MIMAT0006540 Macaca mulatta miR-939                        12      80
mml-miR-491-5p MIMAT0006352 Macaca mulatta miR-491-5p                  12      80
mml-miR-450a-2-3p MIMAT0031019 Macaca mulatta miR-450a-2-3p            12      80
oan-miR-1343-5p MIMAT0006874 Ornithorhynchus anatinus miR-1343-5p      12      80
hsa-miR-939-5p MIMAT0004982 Homo sapiens miR-939-5p                    12      80
rrv-miR-rR1-4-5p MIMAT0004410 Rhesus monkey miR-rR1-4-5p               12      80
mmu-miR-491-5p MIMAT0003486 Mus musculus miR-491-5p                    12      80
dre-miR-139-3p MIMAT0032008 Danio rerio miR-139-3p                     12      80
mmu-miR-450a-2-3p MIMAT0004789 Mus musculus miR-450a-2-3p              12      80
hsa-miR-450a-2-3p MIMAT0031074 Homo sapiens miR-450a-2-3p              12      80
hsa-miR-491-5p MIMAT0002807 Homo sapiens miR-491-5p                    12      80
mml-miR-133a MIMAT0002244 Macaca mulatta miR-133a                      12      80
ppy-miR-133a MIMAT0002242 Pongo pygmaeus miR-133a                      12      80
>mmu-miR-6989-5p MIMAT0027880 Mus musculus miR-6989-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 2 tggggac 8
>hsa-miR-6810-5p MIMAT0027520 Homo sapiens miR-6810-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 2 tggggac 8
>gga-miR-6615-5p MIMAT0025710 Gallus gallus miR-6615-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 2 tggggac 8
>hsa-miR-3191-3p MIMAT0015075 Homo sapiens miR-3191-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 1 tggggac 7
>peu-miR2916 MIMAT0012884 Populus euphratica miR2916
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 1 tggggac 7
>tca-miR-317-5p MIMAT0019130 Tribolium castaneum miR-317-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 1 tggggac 7
>ath-miR447c-3p MIMAT0002115 Arabidopsis thaliana miR447c-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 2 tggggac 8
>ath-miR447b MIMAT0002114 Arabidopsis thaliana miR447b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 2 tggggac 8
>ath-miR447a-3p MIMAT0002113 Arabidopsis thaliana miR447a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tggggac 7
         |||||||
Sbjct: 2 tggggac 8
>tch-miR-491-5p MIMAT0036566 Tupaia chinensis miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>chi-miR-491-5p MIMAT0036251 Capra hircus miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>rno-miR-450b-3p MIMAT0035747 Rattus norvegicus miR-450b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>efu-miR-9272 MIMAT0034905 Eptesicus fuscus miR-9272
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 6 tgggga 1
>gra-miR8735 MIMAT0034147 Gossypium raimondii miR8735
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 1 ggggac 6
>ssa-miR-204-4-3p MIMAT0032491 Salmo salar miR-204-4-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>ssa-miR-204-3-3p MIMAT0032490 Salmo salar miR-204-3-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mmu-miR-8108 MIMAT0031413 Mus musculus miR-8108
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>stu-miR408b-5p MIMAT0031339 Solanum tuberosum miR408b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 3 ggggac 8
>hsa-miR-8089 MIMAT0031016 Homo sapiens miR-8089
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>tgu-miR-7645-5p MIMAT0029790 Taeniopygia guttata miR-7645-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 6 ggggac 1
>mmu-miR-7118-5p MIMAT0028133 Mus musculus miR-7118-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>mmu-miR-7053-5p MIMAT0028010 Mus musculus miR-7053-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>mmu-miR-7030-5p MIMAT0027964 Mus musculus miR-7030-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>mmu-miR-7005-5p MIMAT0027914 Mus musculus miR-7005-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mmu-miR-7003-5p MIMAT0027910 Mus musculus miR-7003-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mmu-miR-6975-5p MIMAT0027852 Mus musculus miR-6975-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>hsa-miR-6780b-5p MIMAT0027572 Homo sapiens miR-6780b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>hsa-miR-6825-5p MIMAT0027550 Homo sapiens miR-6825-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>hsa-miR-6793-3p MIMAT0027487 Homo sapiens miR-6793-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 6 tgggga 1
>gga-miR-6622-3p MIMAT0025825 Gallus gallus miR-6622-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mmu-miR-6356 MIMAT0025099 Mus musculus miR-6356
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 6 tgggga 1
>hme-miR-133 MIMAT0024938 Heliconius melpomene miR-133
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 8 ggggac 3
>hvu-miR6194 MIMAT0024820 Hordeum vulgare miR6194
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mml-miR-4667 MIMAT0024333 Macaca mulatta miR-4667
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>ggo-miR-491 MIMAT0024196 Gorilla gorilla miR-491
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>ptr-miR-4667 MIMAT0024060 Pan troglodytes miR-4667
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>hco-miR-5910 MIMAT0023366 Haemonchus contortus miR-5910
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 8 tgggga 3
>ola-miR-133-3p MIMAT0022560 Oryzias latipes miR-133-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 8 ggggac 3
>rgl-miR164 MIMAT0023004 Rehmannia glutinosa miR164
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>sbi-miR5564a MIMAT0022241 Sorghum bicolor miR5564a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>sly-miR5300 MIMAT0020764 Solanum lycopersicum miR5300
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 6 tgggga 1
>bdi-miR5054 MIMAT0020763 Brachypodium distachyon miR5054
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 6 tgggga 1
>mmu-miR-3572-5p MIMAT0022986 Mus musculus miR-3572-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>ssc-miR-491 MIMAT0020592 Sus scrofa miR-491
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>gma-miR5043 MIMAT0021074 Glycine max miR5043
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 7 ggggac 2
>sko-miR-4825-5p MIMAT0020030 Saccoglossus kowalevskii
         miR-4825-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 1 ggggac 6
>hsa-miR-4725-3p MIMAT0019844 Homo sapiens miR-4725-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>hsa-miR-4700-5p MIMAT0019796 Homo sapiens miR-4700-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>hsa-miR-1343-5p MIMAT0027038 Homo sapiens miR-1343-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>hsa-miR-4667-5p MIMAT0019743 Homo sapiens miR-4667-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>hsa-miR-4450 MIMAT0018971 Homo sapiens miR-4450
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>ppy-miR-939 MIMAT0016139 Pongo pygmaeus miR-939
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>ppy-miR-612 MIMAT0016053 Pongo pygmaeus miR-612
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>ppy-miR-491-5p MIMAT0015911 Pongo pygmaeus miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>tgu-miR-2954-3p MIMAT0014474 Taeniopygia guttata miR-2954-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 8 tgggga 3
>gga-miR-2954 MIMAT0014448 Gallus gallus miR-2954
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 8 tgggga 3
>bta-miR-2889 MIMAT0013847 Bos taurus miR-2889
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 6 ggggac 1
>eca-miR-491-5p MIMAT0013116 Equus caballus miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>bta-miR-2389 MIMAT0011942 Bos taurus miR-2389
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 3 ggggac 8
>bta-miR-1343-5p MIMAT0011839 Bos taurus miR-1343-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>ppc-miR-2247 MIMAT0011735 Pristionchus pacificus miR-2247
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 8 tgggga 3
>bfl-miR-133 MIMAT0009484 Branchiostoma floridae miR-133
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 8 ggggac 3
>bta-miR-491 MIMAT0009332 Bos taurus miR-491
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>ptr-miR-939 MIMAT0008346 Pan troglodytes miR-939
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>cel-miR-1829a-5p MIMAT0015267 Caenorhabditis elegans
         miR-1829a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 3 ggggac 8
>mml-miR-939 MIMAT0006540 Macaca mulatta miR-939
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>mml-miR-491-5p MIMAT0006352 Macaca mulatta miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mml-miR-450a-2-3p MIMAT0031019 Macaca mulatta miR-450a-2-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>oan-miR-1343-5p MIMAT0006874 Ornithorhynchus anatinus
         miR-1343-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 3 ggggac 8
>hsa-miR-939-5p MIMAT0004982 Homo sapiens miR-939-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>rrv-miR-rR1-4-5p MIMAT0004410 Rhesus monkey miR-rR1-4-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>mmu-miR-491-5p MIMAT0003486 Mus musculus miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>dre-miR-139-3p MIMAT0032008 Danio rerio miR-139-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 1 tgggga 6
>mmu-miR-450a-2-3p MIMAT0004789 Mus musculus miR-450a-2-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>hsa-miR-450a-2-3p MIMAT0031074 Homo sapiens miR-450a-2-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>hsa-miR-491-5p MIMAT0002807 Homo sapiens miR-491-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tgggga 6
         ||||||
Sbjct: 3 tgggga 8
>mml-miR-133a MIMAT0002244 Macaca mulatta miR-133a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 8 ggggac 3
>ppy-miR-133a MIMAT0002242 Pongo pygmaeus miR-133a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ggggac 7
         ||||||
Sbjct: 8 ggggac 3
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 112
Number of extensions: 103
Number of successful extensions: 78
Number of sequences better than 100.0: 78
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 78
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)