BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wssv-miR158
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ata-miR395c-5p MIMAT0037210 Aegilops tauschii miR395c-5p               14      20
gra-miR7504m MIMAT0034227 Gossypium raimondii miR7504m                 14      20
gra-miR7504l MIMAT0034226 Gossypium raimondii miR7504l                 14      20
gra-miR7504k MIMAT0034225 Gossypium raimondii miR7504k                 14      20
gra-miR7504f MIMAT0034068 Gossypium raimondii miR7504f                 14      20
gra-miR7504e MIMAT0034067 Gossypium raimondii miR7504e                 14      20
gga-miR-6706-5p MIMAT0025816 Gallus gallus miR-6706-5p                 14      20
gga-miR-6619-5p MIMAT0025715 Gallus gallus miR-6619-5p                 14      20
hvu-miR6204 MIMAT0024832 Hordeum vulgare miR6204                       14      20
hsa-miR-5703 MIMAT0022496 Homo sapiens miR-5703                        14      20
bdi-miR395e-5p MIMAT0027089 Brachypodium distachyon miR395e-5p         14      20
hsa-miR-4434 MIMAT0018950 Homo sapiens miR-4434                        14      20
esi-miR3453-5p MIMAT0017779 Ectocarpus siliculosus miR3453-5p          14      20
gga-miR-1596-5p MIMAT0007460 Gallus gallus miR-1596-5p                 14      20
rno-miR-207 MIMAT0003115 Rattus norvegicus miR-207                     14      20
zma-miR395a-5p MIMAT0015166 Zea mays miR395a-5p                        14      20
ata-miR1432-5p MIMAT0037214 Aegilops tauschii miR1432-5p               12      80
ssc-miR-9788-3p MIMAT0037005 Sus scrofa miR-9788-3p                    12      80
ggo-miR-519e-5p MIMAT0036407 Gorilla gorilla miR-519e-5p               12      80
ggo-miR-515-5p MIMAT0036405 Gorilla gorilla miR-515-5p                 12      80
nve-miR-9449 MIMAT0035410 Nematostella vectensis miR-9449              12      80
efu-miR-9348 MIMAT0035118 Eptesicus fuscus miR-9348                    12      80
efu-miR-9306 MIMAT0034979 Eptesicus fuscus miR-9306                    12      80
efu-miR-9280 MIMAT0034918 Eptesicus fuscus miR-9280                    12      80
efu-miR-9268 MIMAT0034898 Eptesicus fuscus miR-9268                    12      80
eca-miR-9076 MIMAT0034621 Equus caballus miR-9076                      12      80
atr-miR8602 MIMAT0033891 Amborella trichopoda miR8602                  12      80
sma-miR-8475-5p MIMAT0033671 Schistosoma mansoni miR-8475-5p           12      80
str-miR-47-5p MIMAT0033404 Strongyloides ratti miR-47-5p               12      80
ppc-miR-8324-5p MIMAT0033192 Pristionchus pacificus miR-8324-5p        12      80
mmu-miR-8103 MIMAT0031407 Mus musculus miR-8103                        12      80
hhi-miR-7795 MIMAT0030342 Hippoglossus hippoglossus miR-7795           12      80
bdi-miR7722-5p MIMAT0030170 Brachypodium distachyon miR7722-5p         12      80
gga-miR-7439-3p MIMAT0029033 Gallus gallus miR-7439-3p                 12      80
mdo-miR-30c-1-3p MIMAT0028503 Monodelphis domestica miR-30c-1-3p       12      80
mmu-miR-7050-5p MIMAT0028004 Mus musculus miR-7050-5p                  12      80
mmu-miR-7037-3p MIMAT0027979 Mus musculus miR-7037-3p                  12      80
mmu-miR-6975-3p MIMAT0027853 Mus musculus miR-6975-3p                  12      80
hsa-miR-6878-5p MIMAT0027656 Homo sapiens miR-6878-5p                  12      80
hsa-miR-6845-3p MIMAT0027591 Homo sapiens miR-6845-3p                  12      80
gga-miR-6698-3p MIMAT0025805 Gallus gallus miR-6698-3p                 12      80
gga-miR-6626-5p MIMAT0025722 Gallus gallus miR-6626-5p                 12      80
gga-miR-6570-3p MIMAT0025648 Gallus gallus miR-6570-3p                 12      80
gga-miR-6559-5p MIMAT0025625 Gallus gallus miR-6559-5p                 12      80
hvu-miR6192 MIMAT0024818 Hordeum vulgare miR6192                       12      80
mml-miR-519e MIMAT0024353 Macaca mulatta miR-519e                      12      80
ptr-miR-4428 MIMAT0024069 Pan troglodytes miR-4428                     12      80
mtr-miR5239 MIMAT0021233 Medicago truncatula miR5239                   12      80
mtr-miR5221 MIMAT0021178 Medicago truncatula miR5221                   12      80
hsa-miR-5192 MIMAT0021123 Homo sapiens miR-5192                        12      80
osa-miR5144-3p MIMAT0021089 Oryza sativa miR5144-3p                    12      80
osa-miR5075 MIMAT0020561 Oryza sativa miR5075                          12      80
egr-miR-4990 MIMAT0020251 Echinococcus granulosus miR-4990             12      80
bfl-miR-4882b MIMAT0020467 Branchiostoma floridae miR-4882b            12      80
sko-miR-4830b-3p MIMAT0020043 Saccoglossus kowalevskii miR-4830b-3p    12      80
hsa-miR-4784 MIMAT0019948 Homo sapiens miR-4784                        12      80
hsa-miR-4768-3p MIMAT0019921 Homo sapiens miR-4768-3p                  12      80
hsa-miR-4713-5p MIMAT0019820 Homo sapiens miR-4713-5p                  12      80
hsa-miR-4531 MIMAT0019070 Homo sapiens miR-4531                        12      80
hsa-miR-4428 MIMAT0018943 Homo sapiens miR-4428                        12      80
hsa-miR-3150b-3p MIMAT0018194 Homo sapiens miR-3150b-3p                12      80
sja-miR-3500 MIMAT0016309 Schistosoma japonicum miR-3500               12      80
ppy-miR-1253 MIMAT0016178 Pongo pygmaeus miR-1253                      12      80
ppy-miR-539 MIMAT0015989 Pongo pygmaeus miR-539                        12      80
ppy-miR-515-5p MIMAT0015943 Pongo pygmaeus miR-515-5p                  12      80
mmu-miR-3062-5p MIMAT0014830 Mus musculus miR-3062-5p                  12      80
eca-miR-539 MIMAT0013167 Equus caballus miR-539                        12      80
hvt-miR-H13 MIMAT0012865 Herpesvirus of miR-H13                        12      80
aqc-miR477f MIMAT0012583 Aquilegia caerulea miR477f                    12      80
dps-miR-2556-3p MIMAT0012375 Drosophila pseudoobscura miR-2556-3p      12      80
bta-miR-2486-5p MIMAT0012081 Bos taurus miR-2486-5p                    12      80
bta-miR-2454-3p MIMAT0012036 Bos taurus miR-2454-3p                    12      80
bta-miR-2394 MIMAT0011947 Bos taurus miR-2394                          12      80
bmo-miR-965-5p MIMAT0015295 Bombyx mori miR-965-5p                     12      80
cfa-miR-207 MIMAT0009935 Canis familiaris miR-207                      12      80
cfa-miR-539 MIMAT0009909 Canis familiaris miR-539                      12      80
bta-miR-539 MIMAT0009342 Bos taurus miR-539                            12      80
ptr-miR-539 MIMAT0008214 Pan troglodytes miR-539                       12      80
mml-miR-936 MIMAT0006537 Macaca mulatta miR-936                        12      80
mml-miR-650d MIMAT0006491 Macaca mulatta miR-650d                      12      80
mml-miR-539 MIMAT0006405 Macaca mulatta miR-539                        12      80
mml-miR-30c-2-3p MIMAT0031117 Macaca mulatta miR-30c-2-3p              12      80
mdv1-miR-M9-5p MIMAT0005979 Mareks disease miR-M9-5p                   12      80
oan-miR-1402 MIMAT0007209 Ornithorhynchus anatinus miR-1402            12      80
oan-miR-1355-3p MIMAT0006952 Ornithorhynchus anatinus miR-1355-3p      12      80
mcmv-miR-m01-1 MIMAT0005533 Mouse cytomegalovirus miR-m01-1            12      80
mmu-miR-882 MIMAT0004847 Mus musculus miR-882                          12      80
ath-miR830-5p MIMAT0004247 Arabidopsis thaliana miR830-5p              12      80
rno-miR-539-5p MIMAT0003176 Rattus norvegicus miR-539-5p               12      80
mmu-miR-539-5p MIMAT0003169 Mus musculus miR-539-5p                    12      80
hsa-miR-539-5p MIMAT0003163 Homo sapiens miR-539-5p                    12      80
hsa-miR-519e-5p MIMAT0002828 Homo sapiens miR-519e-5p                  12      80
hsa-miR-515-5p MIMAT0002826 Homo sapiens miR-515-5p                    12      80
gga-miR-30c-2-3p MIMAT0026515 Gallus gallus miR-30c-2-3p               12      80
mmu-miR-207 MIMAT0000240 Mus musculus miR-207                          12      80
>ata-miR395c-5p MIMAT0037210 Aegilops tauschii miR395c-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>gra-miR7504m MIMAT0034227 Gossypium raimondii miR7504m
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>gra-miR7504l MIMAT0034226 Gossypium raimondii miR7504l
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>gra-miR7504k MIMAT0034225 Gossypium raimondii miR7504k
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>gra-miR7504f MIMAT0034068 Gossypium raimondii miR7504f
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>gra-miR7504e MIMAT0034067 Gossypium raimondii miR7504e
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>gga-miR-6706-5p MIMAT0025816 Gallus gallus miR-6706-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>gga-miR-6619-5p MIMAT0025715 Gallus gallus miR-6619-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>hvu-miR6204 MIMAT0024832 Hordeum vulgare miR6204
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>hsa-miR-5703 MIMAT0022496 Homo sapiens miR-5703
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>bdi-miR395e-5p MIMAT0027089 Brachypodium distachyon miR395e-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>hsa-miR-4434 MIMAT0018950 Homo sapiens miR-4434
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 7 ttctcct 1
>esi-miR3453-5p MIMAT0017779 Ectocarpus siliculosus miR3453-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 1 ttctcct 7
>gga-miR-1596-5p MIMAT0007460 Gallus gallus miR-1596-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>rno-miR-207 MIMAT0003115 Rattus norvegicus miR-207
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>zma-miR395a-5p MIMAT0015166 Zea mays miR395a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttctcct 7
         |||||||
Sbjct: 2 ttctcct 8
>ata-miR1432-5p MIMAT0037214 Aegilops tauschii miR1432-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>ssc-miR-9788-3p MIMAT0037005 Sus scrofa miR-9788-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>ggo-miR-519e-5p MIMAT0036407 Gorilla gorilla miR-519e-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>ggo-miR-515-5p MIMAT0036405 Gorilla gorilla miR-515-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>nve-miR-9449 MIMAT0035410 Nematostella vectensis miR-9449
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 3 tctcct 8
>efu-miR-9348 MIMAT0035118 Eptesicus fuscus miR-9348
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>efu-miR-9306 MIMAT0034979 Eptesicus fuscus miR-9306
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>efu-miR-9280 MIMAT0034918 Eptesicus fuscus miR-9280
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>efu-miR-9268 MIMAT0034898 Eptesicus fuscus miR-9268
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>eca-miR-9076 MIMAT0034621 Equus caballus miR-9076
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>atr-miR8602 MIMAT0033891 Amborella trichopoda miR8602
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>sma-miR-8475-5p MIMAT0033671 Schistosoma mansoni miR-8475-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 3 tctcct 8
>str-miR-47-5p MIMAT0033404 Strongyloides ratti miR-47-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 7 tctcct 2
>ppc-miR-8324-5p MIMAT0033192 Pristionchus pacificus miR-8324-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>mmu-miR-8103 MIMAT0031407 Mus musculus miR-8103
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>hhi-miR-7795 MIMAT0030342 Hippoglossus hippoglossus miR-7795
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>bdi-miR7722-5p MIMAT0030170 Brachypodium distachyon miR7722-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>gga-miR-7439-3p MIMAT0029033 Gallus gallus miR-7439-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>mdo-miR-30c-1-3p MIMAT0028503 Monodelphis domestica
         miR-30c-1-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>mmu-miR-7050-5p MIMAT0028004 Mus musculus miR-7050-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>mmu-miR-7037-3p MIMAT0027979 Mus musculus miR-7037-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 3 tctcct 8
>mmu-miR-6975-3p MIMAT0027853 Mus musculus miR-6975-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 3 tctcct 8
>hsa-miR-6878-5p MIMAT0027656 Homo sapiens miR-6878-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>hsa-miR-6845-3p MIMAT0027591 Homo sapiens miR-6845-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 3 tctcct 8
>gga-miR-6698-3p MIMAT0025805 Gallus gallus miR-6698-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>gga-miR-6626-5p MIMAT0025722 Gallus gallus miR-6626-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>gga-miR-6570-3p MIMAT0025648 Gallus gallus miR-6570-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>gga-miR-6559-5p MIMAT0025625 Gallus gallus miR-6559-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>hvu-miR6192 MIMAT0024818 Hordeum vulgare miR6192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 7 tctcct 2
>mml-miR-519e MIMAT0024353 Macaca mulatta miR-519e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>ptr-miR-4428 MIMAT0024069 Pan troglodytes miR-4428
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>mtr-miR5239 MIMAT0021233 Medicago truncatula miR5239
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>mtr-miR5221 MIMAT0021178 Medicago truncatula miR5221
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>hsa-miR-5192 MIMAT0021123 Homo sapiens miR-5192
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>osa-miR5144-3p MIMAT0021089 Oryza sativa miR5144-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>osa-miR5075 MIMAT0020561 Oryza sativa miR5075
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>egr-miR-4990 MIMAT0020251 Echinococcus granulosus miR-4990
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>bfl-miR-4882b MIMAT0020467 Branchiostoma floridae miR-4882b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>sko-miR-4830b-3p MIMAT0020043 Saccoglossus kowalevskii
         miR-4830b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>hsa-miR-4784 MIMAT0019948 Homo sapiens miR-4784
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>hsa-miR-4768-3p MIMAT0019921 Homo sapiens miR-4768-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>hsa-miR-4713-5p MIMAT0019820 Homo sapiens miR-4713-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>hsa-miR-4531 MIMAT0019070 Homo sapiens miR-4531
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>hsa-miR-4428 MIMAT0018943 Homo sapiens miR-4428
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>hsa-miR-3150b-3p MIMAT0018194 Homo sapiens miR-3150b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>sja-miR-3500 MIMAT0016309 Schistosoma japonicum miR-3500
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>ppy-miR-1253 MIMAT0016178 Pongo pygmaeus miR-1253
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>ppy-miR-539 MIMAT0015989 Pongo pygmaeus miR-539
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>ppy-miR-515-5p MIMAT0015943 Pongo pygmaeus miR-515-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>mmu-miR-3062-5p MIMAT0014830 Mus musculus miR-3062-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>eca-miR-539 MIMAT0013167 Equus caballus miR-539
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>hvt-miR-H13 MIMAT0012865 Herpesvirus of miR-H13
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>aqc-miR477f MIMAT0012583 Aquilegia caerulea miR477f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 2 tctcct 7
>dps-miR-2556-3p MIMAT0012375 Drosophila pseudoobscura
         miR-2556-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>bta-miR-2486-5p MIMAT0012081 Bos taurus miR-2486-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>bta-miR-2454-3p MIMAT0012036 Bos taurus miR-2454-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>bta-miR-2394 MIMAT0011947 Bos taurus miR-2394
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>bmo-miR-965-5p MIMAT0015295 Bombyx mori miR-965-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>cfa-miR-207 MIMAT0009935 Canis familiaris miR-207
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>cfa-miR-539 MIMAT0009909 Canis familiaris miR-539
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>bta-miR-539 MIMAT0009342 Bos taurus miR-539
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>ptr-miR-539 MIMAT0008214 Pan troglodytes miR-539
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>mml-miR-936 MIMAT0006537 Macaca mulatta miR-936
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>mml-miR-650d MIMAT0006491 Macaca mulatta miR-650d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>mml-miR-539 MIMAT0006405 Macaca mulatta miR-539
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>mml-miR-30c-2-3p MIMAT0031117 Macaca mulatta miR-30c-2-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>mdv1-miR-M9-5p MIMAT0005979 Mareks disease miR-M9-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>oan-miR-1402 MIMAT0007209 Ornithorhynchus anatinus miR-1402
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>oan-miR-1355-3p MIMAT0006952 Ornithorhynchus anatinus
         miR-1355-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 1 tctcct 6
>mcmv-miR-m01-1 MIMAT0005533 Mouse cytomegalovirus miR-m01-1
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 8 tctcct 3
>mmu-miR-882 MIMAT0004847 Mus musculus miR-882
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tctcct 7
         ||||||
Sbjct: 6 tctcct 1
>ath-miR830-5p MIMAT0004247 Arabidopsis thaliana miR830-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
>rno-miR-539-5p MIMAT0003176 Rattus norvegicus miR-539-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>mmu-miR-539-5p MIMAT0003169 Mus musculus miR-539-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>hsa-miR-539-5p MIMAT0003163 Homo sapiens miR-539-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 6 ttctcc 1
>hsa-miR-519e-5p MIMAT0002828 Homo sapiens miR-519e-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>hsa-miR-515-5p MIMAT0002826 Homo sapiens miR-515-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 1 ttctcc 6
>gga-miR-30c-2-3p MIMAT0026515 Gallus gallus miR-30c-2-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 8 ttctcc 3
>mmu-miR-207 MIMAT0000240 Mus musculus miR-207
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttctcc 6
         ||||||
Sbjct: 3 ttctcc 8
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 248
Number of extensions: 232
Number of successful extensions: 95
Number of sequences better than 100.0: 95
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 95
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)