BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tumv-miR-s3
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

efu-miR-9189f MIMAT0034887 Eptesicus fuscus miR-9189f                  14      20
mmu-miR-7673-5p MIMAT0029852 Mus musculus miR-7673-5p                  14      20
sma-miR-2a-5p MIMAT0025029 Schistosoma mansoni miR-2a-5p               14      20
sja-miR-2a-5p MIMAT0016245 Schistosoma japonicum miR-2a-5p             14      20
cte-miR-2692 MIMAT0013549 Capitella teleta miR-2692                    14      20
tca-miR-13b-5p MIMAT0019104 Tribolium castaneum miR-13b-5p             14      20
oan-miR-1422p-5p MIMAT0007314 Ornithorhynchus anatinus miR-1422p-5p    14      20
oha-miR-2970-5p MIMAT0036869 Ophiophagus hannah miR-2970-5p            12      80
chi-miR-134 MIMAT0035951 Capra hircus miR-134                          12      80
efu-miR-9285 MIMAT0034936 Eptesicus fuscus miR-9285                    12      80
efu-miR-9189e MIMAT0034769 Eptesicus fuscus miR-9189e                  12      80
eca-miR-8990 MIMAT0034527 Equus caballus miR-8990                      12      80
eca-miR-8956 MIMAT0034488 Equus caballus miR-8956                      12      80
eca-miR-8936 MIMAT0034465 Equus caballus miR-8936                      12      80
cfa-miR-508b MIMAT0034425 Canis familiaris miR-508b                    12      80
cfa-miR-2483 MIMAT0034421 Canis familiaris miR-2483                    12      80
pxy-miR-8535-5p MIMAT0033783 Plutella xylostella miR-8535-5p           12      80
ppc-miR-8245b-5p MIMAT0033186 Pristionchus pacificus miR-8245b-5p      12      80
ppc-miR-8229b-3p MIMAT0033143 Pristionchus pacificus miR-8229b-3p      12      80
ppc-miR-2238k-3p MIMAT0033038 Pristionchus pacificus miR-2238k-3p      12      80
ppc-miR-8246-5p MIMAT0032956 Pristionchus pacificus miR-8246-5p        12      80
ppc-miR-2238f-3p MIMAT0032857 Pristionchus pacificus miR-2238f-3p      12      80
ath-miR8179 MIMAT0032778 Arabidopsis thaliana miR8179                  12      80
ssa-miR-725-3p MIMAT0032674 Salmo salar miR-725-3p                     12      80
ssa-miR-29b-2-5p MIMAT0032587 Salmo salar miR-29b-2-5p                 12      80
cpa-miR8148 MIMAT0031845 Carica papaya miR8148                         12      80
prd-miR-7927e-3p MIMAT0030703 Panagrellus redivivus miR-7927e-3p       12      80
prd-miR-7927b-3p MIMAT0030645 Panagrellus redivivus miR-7927b-3p       12      80
prd-miR-7939d-3p MIMAT0030643 Panagrellus redivivus miR-7939d-3p       12      80
prd-miR-7927d-3p MIMAT0030613 Panagrellus redivivus miR-7927d-3p       12      80
prd-miR-7927a-3p MIMAT0030547 Panagrellus redivivus miR-7927a-3p       12      80
prd-miR-7940c-3p MIMAT0030537 Panagrellus redivivus miR-7940c-3p       12      80
bdi-miR7771-5p MIMAT0030292 Brachypodium distachyon miR7771-5p         12      80
pmi-miR-2011-5p MIMAT0032185 Patiria miniata miR-2011-5p               12      80
mmu-miR-7661-3p MIMAT0029829 Mus musculus miR-7661-3p                  12      80
gga-miR-7460-3p MIMAT0029075 Gallus gallus miR-7460-3p                 12      80
mdo-miR-7347-5p MIMAT0028706 Monodelphis domestica miR-7347-5p         12      80
mdo-miR-2970-5p MIMAT0028670 Monodelphis domestica miR-2970-5p         12      80
mdo-miR-449b-3p MIMAT0028583 Monodelphis domestica miR-449b-3p         12      80
mmu-miR-7221-3p MIMAT0028411 Mus musculus miR-7221-3p                  12      80
sbi-miR437x-3p MIMAT0026407 Sorghum bicolor miR437x-3p                 12      80
ccr-miR-725 MIMAT0026312 Cyprinus carpio miR-725                       12      80
cme-miR7129 MIMAT0026183 Cucumis melo miR7129                          12      80
mmu-miR-6961-5p MIMAT0027822 Mus musculus miR-6961-5p                  12      80
hsa-miR-6857-3p MIMAT0027615 Homo sapiens miR-6857-3p                  12      80
gga-miR-6562-3p MIMAT0025833 Gallus gallus miR-6562-3p                 12      80
bta-miR-378b MIMAT0025535 Bos taurus miR-378b                          12      80
pgi-miR6135j MIMAT0027251 Panax ginseng miR6135j                       12      80
pgi-miR6135e.2-5p MIMAT0027246 Panax ginseng miR6135e.2-5p             12      80
ppy-miR-4667 MIMAT0024386 Pongo pygmaeus miR-4667                      12      80
cgr-miR-134 MIMAT0023760 Cricetulus griseus miR-134                    12      80
osa-miR5789 MIMAT0023256 Oryza sativa miR5789                          12      80
ath-miR5664 MIMAT0022442 Arabidopsis thaliana miR5664                  12      80
osa-miR5531 MIMAT0022166 Oryza sativa miR5531                          12      80
aca-miR-5460 MIMAT0022088 Anolis carolinensis miR-5460                 12      80
aca-miR-2970-5p MIMAT0021909 Anolis carolinensis miR-2970-5p           12      80
mtr-miR5241c MIMAT0021237 Medicago truncatula miR5241c                 12      80
mtr-miR5241b MIMAT0021236 Medicago truncatula miR5241b                 12      80
mtr-miR5241a MIMAT0021235 Medicago truncatula miR5241a                 12      80
bdi-miR169h-3p MIMAT0027071 Brachypodium distachyon miR169h-3p         12      80
hsa-miR-5002-3p MIMAT0021024 Homo sapiens miR-5002-3p                  12      80
tcc-miR169n MIMAT0020404 Theobroma cacao miR169n                       12      80
hsa-miR-4704-3p MIMAT0019804 Homo sapiens miR-4704-3p                  12      80
pma-miR-4629 MIMAT0019663 Petromyzon marinus miR-4629                  12      80
oar-miR-134-5p MIMAT0019308 Ovis aries miR-134-5p                      12      80
cin-miR-4007-5p MIMAT0016486 Ciona intestinalis miR-4007-5p            12      80
sja-miR-3505 MIMAT0016314 Schistosoma japonicum miR-3505               12      80
bmo-miR-3385-3p MIMAT0015582 Bombyx mori miR-3385-3p                   12      80
bmo-miR-3282 MIMAT0015468 Bombyx mori miR-3282                         12      80
hsa-miR-3118 MIMAT0014980 Homo sapiens miR-3118                        12      80
tgu-miR-2970-5p MIMAT0014479 Taeniopygia guttata miR-2970-5p           12      80
tgu-miR-1677-3p MIMAT0026959 Taeniopygia guttata miR-1677-3p           12      80
eca-miR-134 MIMAT0013127 Equus caballus miR-134                        12      80
dsi-miR-1012-3p MIMAT0012426 Drosophila simulans miR-1012-3p           12      80
cfa-miR-134 MIMAT0009883 Canis familiaris miR-134                      12      80
bta-miR-134 MIMAT0009227 Bos taurus miR-134                            12      80
tca-miR-929-5p MIMAT0008395 Tribolium castaneum miR-929-5p             12      80
ptr-miR-134 MIMAT0008031 Pan troglodytes miR-134                       12      80
mml-miR-134-5p MIMAT0006190 Macaca mulatta miR-134-5p                  12      80
gga-miR-449b-3p MIMAT0007744 Gallus gallus miR-449b-3p                 12      80
gga-miR-1738 MIMAT0007641 Gallus gallus miR-1738                       12      80
gga-miR-1731-5p MIMAT0007633 Gallus gallus miR-1731-5p                 12      80
gga-miR-1586 MIMAT0007448 Gallus gallus miR-1586                       12      80
vvi-miR169u MIMAT0005690 Vitis vinifera miR169u                        12      80
vvi-miR169t MIMAT0005689 Vitis vinifera miR169t                        12      80
vvi-miR169r MIMAT0005687 Vitis vinifera miR169r                        12      80
rno-miR-871-3p MIMAT0017289 Rattus norvegicus miR-871-3p               12      80
dme-miR-1012-3p MIMAT0005025 Drosophila melanogaster miR-1012-3p       12      80
mmu-miR-871-3p MIMAT0017265 Mus musculus miR-871-3p                    12      80
dre-miR-725-3p MIMAT0003753 Danio rerio miR-725-3p                     12      80
mmu-miR-707 MIMAT0003497 Mus musculus miR-707                          12      80
ppa-miR-134 MIMAT0002291 Pan paniscus miR-134                          12      80
mne-miR-134 MIMAT0002290 Macaca nemestrina miR-134                     12      80
ppy-miR-134 MIMAT0002289 Pongo pygmaeus miR-134                        12      80
ggo-miR-134 MIMAT0002288 Gorilla gorilla miR-134                       12      80
mmu-miR-468-3p MIMAT0002109 Mus musculus miR-468-3p                    12      80
zma-miR171g-5p MIMAT0015202 Zea mays miR171g-5p                        12      80
zma-miR171c-3p MIMAT0001737 Zea mays miR171c-3p                        12      80
rno-miR-134-5p MIMAT0000840 Rattus norvegicus miR-134-5p               12      80
hsa-miR-134-5p MIMAT0000447 Homo sapiens miR-134-5p                    12      80
mmu-miR-134-5p MIMAT0000146 Mus musculus miR-134-5p                    12      80
>efu-miR-9189f MIMAT0034887 Eptesicus fuscus miR-9189f
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 1 ttgactg 7
>mmu-miR-7673-5p MIMAT0029852 Mus musculus miR-7673-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 2 ttgactg 8
>sma-miR-2a-5p MIMAT0025029 Schistosoma mansoni miR-2a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 7 ttgactg 1
>sja-miR-2a-5p MIMAT0016245 Schistosoma japonicum miR-2a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 7 ttgactg 1
>cte-miR-2692 MIMAT0013549 Capitella teleta miR-2692
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 8 ttgactg 2
>tca-miR-13b-5p MIMAT0019104 Tribolium castaneum miR-13b-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 7 ttgactg 1
>oan-miR-1422p-5p MIMAT0007314 Ornithorhynchus anatinus
         miR-1422p-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgactg 7
         |||||||
Sbjct: 8 ttgactg 2
>oha-miR-2970-5p MIMAT0036869 Ophiophagus hannah miR-2970-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>chi-miR-134 MIMAT0035951 Capra hircus miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>efu-miR-9285 MIMAT0034936 Eptesicus fuscus miR-9285
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 1 ttgact 6
>efu-miR-9189e MIMAT0034769 Eptesicus fuscus miR-9189e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>eca-miR-8990 MIMAT0034527 Equus caballus miR-8990
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>eca-miR-8956 MIMAT0034488 Equus caballus miR-8956
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 1 ttgact 6
>eca-miR-8936 MIMAT0034465 Equus caballus miR-8936
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>cfa-miR-508b MIMAT0034425 Canis familiaris miR-508b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>cfa-miR-2483 MIMAT0034421 Canis familiaris miR-2483
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 6 ttgact 1
>pxy-miR-8535-5p MIMAT0033783 Plutella xylostella miR-8535-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>ppc-miR-8245b-5p MIMAT0033186 Pristionchus pacificus
         miR-8245b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>ppc-miR-8229b-3p MIMAT0033143 Pristionchus pacificus
         miR-8229b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 1 ttgact 6
>ppc-miR-2238k-3p MIMAT0033038 Pristionchus pacificus
         miR-2238k-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>ppc-miR-8246-5p MIMAT0032956 Pristionchus pacificus miR-8246-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>ppc-miR-2238f-3p MIMAT0032857 Pristionchus pacificus
         miR-2238f-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>ath-miR8179 MIMAT0032778 Arabidopsis thaliana miR8179
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>ssa-miR-725-3p MIMAT0032674 Salmo salar miR-725-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>ssa-miR-29b-2-5p MIMAT0032587 Salmo salar miR-29b-2-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>cpa-miR8148 MIMAT0031845 Carica papaya miR8148
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>prd-miR-7927e-3p MIMAT0030703 Panagrellus redivivus
         miR-7927e-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 7 tgactg 2
>prd-miR-7927b-3p MIMAT0030645 Panagrellus redivivus
         miR-7927b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 7 tgactg 2
>prd-miR-7939d-3p MIMAT0030643 Panagrellus redivivus
         miR-7939d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>prd-miR-7927d-3p MIMAT0030613 Panagrellus redivivus
         miR-7927d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 7 tgactg 2
>prd-miR-7927a-3p MIMAT0030547 Panagrellus redivivus
         miR-7927a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 7 tgactg 2
>prd-miR-7940c-3p MIMAT0030537 Panagrellus redivivus
         miR-7940c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>bdi-miR7771-5p MIMAT0030292 Brachypodium distachyon miR7771-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>pmi-miR-2011-5p MIMAT0032185 Patiria miniata miR-2011-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 6 tgactg 1
>mmu-miR-7661-3p MIMAT0029829 Mus musculus miR-7661-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 1 ttgact 6
>gga-miR-7460-3p MIMAT0029075 Gallus gallus miR-7460-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>mdo-miR-7347-5p MIMAT0028706 Monodelphis domestica miR-7347-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>mdo-miR-2970-5p MIMAT0028670 Monodelphis domestica miR-2970-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>mdo-miR-449b-3p MIMAT0028583 Monodelphis domestica miR-449b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 6 tgactg 1
>mmu-miR-7221-3p MIMAT0028411 Mus musculus miR-7221-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>sbi-miR437x-3p MIMAT0026407 Sorghum bicolor miR437x-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>ccr-miR-725 MIMAT0026312 Cyprinus carpio miR-725
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>cme-miR7129 MIMAT0026183 Cucumis melo miR7129
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 6 ttgact 1
>mmu-miR-6961-5p MIMAT0027822 Mus musculus miR-6961-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>hsa-miR-6857-3p MIMAT0027615 Homo sapiens miR-6857-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>gga-miR-6562-3p MIMAT0025833 Gallus gallus miR-6562-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 7 tgactg 2
>bta-miR-378b MIMAT0025535 Bos taurus miR-378b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>pgi-miR6135j MIMAT0027251 Panax ginseng miR6135j
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>pgi-miR6135e.2-5p MIMAT0027246 Panax ginseng miR6135e.2-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>ppy-miR-4667 MIMAT0024386 Pongo pygmaeus miR-4667
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>cgr-miR-134 MIMAT0023760 Cricetulus griseus miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>osa-miR5789 MIMAT0023256 Oryza sativa miR5789
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>ath-miR5664 MIMAT0022442 Arabidopsis thaliana miR5664
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>osa-miR5531 MIMAT0022166 Oryza sativa miR5531
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>aca-miR-5460 MIMAT0022088 Anolis carolinensis miR-5460
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>aca-miR-2970-5p MIMAT0021909 Anolis carolinensis miR-2970-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>mtr-miR5241c MIMAT0021237 Medicago truncatula miR5241c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>mtr-miR5241b MIMAT0021236 Medicago truncatula miR5241b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>mtr-miR5241a MIMAT0021235 Medicago truncatula miR5241a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>bdi-miR169h-3p MIMAT0027071 Brachypodium distachyon miR169h-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>hsa-miR-5002-3p MIMAT0021024 Homo sapiens miR-5002-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>tcc-miR169n MIMAT0020404 Theobroma cacao miR169n
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>hsa-miR-4704-3p MIMAT0019804 Homo sapiens miR-4704-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 7 tgactg 2
>pma-miR-4629 MIMAT0019663 Petromyzon marinus miR-4629
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>oar-miR-134-5p MIMAT0019308 Ovis aries miR-134-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>cin-miR-4007-5p MIMAT0016486 Ciona intestinalis miR-4007-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 1 ttgact 6
>sja-miR-3505 MIMAT0016314 Schistosoma japonicum miR-3505
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>bmo-miR-3385-3p MIMAT0015582 Bombyx mori miR-3385-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>bmo-miR-3282 MIMAT0015468 Bombyx mori miR-3282
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 6 tgactg 1
>hsa-miR-3118 MIMAT0014980 Homo sapiens miR-3118
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>tgu-miR-2970-5p MIMAT0014479 Taeniopygia guttata miR-2970-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>tgu-miR-1677-3p MIMAT0026959 Taeniopygia guttata miR-1677-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 1 ttgact 6
>eca-miR-134 MIMAT0013127 Equus caballus miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>dsi-miR-1012-3p MIMAT0012426 Drosophila simulans miR-1012-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>cfa-miR-134 MIMAT0009883 Canis familiaris miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>bta-miR-134 MIMAT0009227 Bos taurus miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>tca-miR-929-5p MIMAT0008395 Tribolium castaneum miR-929-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>ptr-miR-134 MIMAT0008031 Pan troglodytes miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>mml-miR-134-5p MIMAT0006190 Macaca mulatta miR-134-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>gga-miR-449b-3p MIMAT0007744 Gallus gallus miR-449b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 6 tgactg 1
>gga-miR-1738 MIMAT0007641 Gallus gallus miR-1738
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>gga-miR-1731-5p MIMAT0007633 Gallus gallus miR-1731-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>gga-miR-1586 MIMAT0007448 Gallus gallus miR-1586
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 6 tgactg 1
>vvi-miR169u MIMAT0005690 Vitis vinifera miR169u
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>vvi-miR169t MIMAT0005689 Vitis vinifera miR169t
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>vvi-miR169r MIMAT0005687 Vitis vinifera miR169r
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>rno-miR-871-3p MIMAT0017289 Rattus norvegicus miR-871-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>dme-miR-1012-3p MIMAT0005025 Drosophila melanogaster
         miR-1012-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 8 ttgact 3
>mmu-miR-871-3p MIMAT0017265 Mus musculus miR-871-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>dre-miR-725-3p MIMAT0003753 Danio rerio miR-725-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 8 tgactg 3
>mmu-miR-707 MIMAT0003497 Mus musculus miR-707
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 6 tgactg 1
>ppa-miR-134 MIMAT0002291 Pan paniscus miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>mne-miR-134 MIMAT0002290 Macaca nemestrina miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>ppy-miR-134 MIMAT0002289 Pongo pygmaeus miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>ggo-miR-134 MIMAT0002288 Gorilla gorilla miR-134
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>mmu-miR-468-3p MIMAT0002109 Mus musculus miR-468-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>zma-miR171g-5p MIMAT0015202 Zea mays miR171g-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 ttgact 6
         ||||||
Sbjct: 3 ttgact 8
>zma-miR171c-3p MIMAT0001737 Zea mays miR171c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 1 tgactg 6
>rno-miR-134-5p MIMAT0000840 Rattus norvegicus miR-134-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>hsa-miR-134-5p MIMAT0000447 Homo sapiens miR-134-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
>mmu-miR-134-5p MIMAT0000146 Mus musculus miR-134-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 tgactg 7
         ||||||
Sbjct: 3 tgactg 8
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 135
Number of extensions: 128
Number of successful extensions: 101
Number of sequences better than 100.0: 101
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 101
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)