BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tumv-miR-s23
         (8 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

hbr-miR159b MIMAT0025294 Hevea brasiliensis miR159b                    16   6.9  
ggo-miR-448 MIMAT0024209 Gorilla gorilla miR-448                       16   6.9  
ppy-miR-448 MIMAT0015890 Pongo pygmaeus miR-448                        16   6.9  
eca-miR-448 MIMAT0013218 Equus caballus miR-448                        16   6.9  
bta-miR-448 MIMAT0009319 Bos taurus miR-448                            16   6.9  
ptr-miR-448 MIMAT0008148 Pan troglodytes miR-448                       16   6.9  
mml-miR-448 MIMAT0006329 Macaca mulatta miR-448                        16   6.9  
cfa-miR-448 MIMAT0001535 Canis familiaris miR-448                      16   6.9  
rno-miR-448-3p MIMAT0001534 Rattus norvegicus miR-448-3p               16   6.9  
mmu-miR-448-3p MIMAT0001533 Mus musculus miR-448-3p                    16   6.9  
hsa-miR-448 MIMAT0001532 Homo sapiens miR-448                          16   6.9  
oha-miR-153-3p MIMAT0036738 Ophiophagus hannah miR-153-3p              14      27
chi-miR-153 MIMAT0035983 Capra hircus miR-153                          14      27
gsa-miR-153-3p MIMAT0035317 Gyrodactylus salaris miR-153-3p            14      27
efu-miR-153 MIMAT0035106 Eptesicus fuscus miR-153                      14      27
ssa-miR-153b-3p MIMAT0032391 Salmo salar miR-153b-3p                   14      27
ssa-miR-153a-3p MIMAT0032388 Salmo salar miR-153a-3p                   14      27
bbe-miR-2061-5p MIMAT0031622 Branchiostoma belcheri miR-2061-5p        14      27
bbe-miR-153-3p MIMAT0031593 Branchiostoma belcheri miR-153-3p          14      27
lva-miR-153-3p MIMAT0032208 Lytechinus variegatus miR-153-3p           14      27
pmi-miR-153-3p MIMAT0032161 Patiria miniata miR-153-3p                 14      27
ipu-miR-153b MIMAT0029428 Ictalurus punctatus miR-153b                 14      27
ccr-miR-153c MIMAT0026230 Cyprinus carpio miR-153c                     14      27
ccr-miR-153b MIMAT0026229 Cyprinus carpio miR-153b                     14      27
gga-miR-6580-3p MIMAT0025668 Gallus gallus miR-6580-3p                 14      27
bfl-miR-153 MIMAT0025391 Branchiostoma floridae miR-153                14      27
cgr-miR-300 MIMAT0023889 Cricetulus griseus miR-300                    14      27
aca-miR-153-3p MIMAT0021786 Anolis carolinensis miR-153-3p             14      27
mtr-miR5231 MIMAT0021216 Medicago truncatula miR5231                   14      27
emu-miR-153 MIMAT0020269 Echinococcus multilocularis miR-153           14      27
egr-miR-153 MIMAT0020244 Echinococcus granulosus miR-153               14      27
pma-miR-153-3p MIMAT0019484 Petromyzon marinus miR-153-3p              14      27
cin-miR-4043-3p MIMAT0016576 Ciona intestinalis miR-4043-3p            14      27
tgu-miR-153-3p MIMAT0014552 Taeniopygia guttata miR-153-3p             14      27
cqu-let-7-3p MIMAT0014367 Culex quinquefasciatus let-7-3p              14      27
bma-miR-153 MIMAT0014119 Brugia malayi miR-153                         14      27
eca-miR-153 MIMAT0012936 Equus caballus miR-153                        14      27
mdo-miR-153-3p MIMAT0012738 Monodelphis domestica miR-153-3p           14      27
isc-miR-153 MIMAT0012688 Ixodes scapularis miR-153                     14      27
dpu-miR-153 MIMAT0012642 Daphnia pulex miR-153                         14      27
dps-miR-2543a-3p MIMAT0012345 Drosophila pseudoobscura miR-2543a-3p    14      27
sme-miR-2163-3p MIMAT0011257 Schmidtea mediterranea miR-2163-3p        14      27
bfl-miR-2061 MIMAT0009987 Branchiostoma floridae miR-2061              14      27
cfa-miR-153 MIMAT0009840 Canis familiaris miR-153                      14      27
spu-miR-153-3p MIMAT0009669 Strongylocentrotus purpuratus miR-15...    14      27
sko-miR-153 MIMAT0009629 Saccoglossus kowalevskii miR-153              14      27
lgi-miR-153 MIMAT0009582 Lottia gigantea miR-153                       14      27
cte-miR-153 MIMAT0009528 Capitella teleta miR-153                      14      27
bta-miR-153 MIMAT0009239 Bos taurus miR-153                            14      27
ptr-miR-153 MIMAT0008047 Pan troglodytes miR-153                       14      27
csa-miR-153 MIMAT0006130 Ciona savignyi miR-153                        14      27
cin-miR-153-3p MIMAT0006104 Ciona intestinalis miR-153-3p              14      27
oan-miR-153-3p MIMAT0007005 Ornithorhynchus anatinus miR-153-3p        14      27
mmu-miR-669i MIMAT0005840 Mus musculus miR-669i                        14      27
mmu-miR-669j MIMAT0005838 Mus musculus miR-669j                        14      27
xtr-miR-153 MIMAT0003607 Xenopus tropicalis miR-153                    14      27
tni-miR-153a MIMAT0003012 Tetraodon nigroviridis miR-153a              14      27
fru-miR-153a MIMAT0003011 Fugu rubripes miR-153a                       14      27
tni-miR-153b MIMAT0003002 Tetraodon nigroviridis miR-153b              14      27
fru-miR-153b MIMAT0003001 Fugu rubripes miR-153b                       14      27
ggo-miR-153 MIMAT0002274 Gorilla gorilla miR-153                       14      27
mne-miR-153 MIMAT0002273 Macaca nemestrina miR-153                     14      27
ppy-miR-153 MIMAT0002272 Pongo pygmaeus miR-153                        14      27
mml-miR-153-3p MIMAT0002271 Macaca mulatta miR-153-3p                  14      27
ssc-miR-153 MIMAT0002160 Sus scrofa miR-153                            14      27
dre-miR-153c-3p MIMAT0001850 Danio rerio miR-153c-3p                   14      27
dre-miR-153a-3p MIMAT0001849 Danio rerio miR-153a-3p                   14      27
dre-miR-153b-3p MIMAT0001848 Danio rerio miR-153b-3p                   14      27
gga-miR-153-3p MIMAT0001119 Gallus gallus miR-153-3p                   14      27
rno-miR-300-3p MIMAT0000902 Rattus norvegicus miR-300-3p               14      27
rno-miR-153-3p MIMAT0000855 Rattus norvegicus miR-153-3p               14      27
hsa-miR-153-3p MIMAT0000439 Homo sapiens miR-153-3p                    14      27
mmu-miR-300-3p MIMAT0000378 Mus musculus miR-300-3p                    14      27
mmu-miR-153-3p MIMAT0000163 Mus musculus miR-153-3p                    14      27
cel-let-7-3p MIMAT0015091 Caenorhabditis elegans let-7-3p              14      27
>hbr-miR159b MIMAT0025294 Hevea brasiliensis miR159b
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>ggo-miR-448 MIMAT0024209 Gorilla gorilla miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>ppy-miR-448 MIMAT0015890 Pongo pygmaeus miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>eca-miR-448 MIMAT0013218 Equus caballus miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>bta-miR-448 MIMAT0009319 Bos taurus miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>ptr-miR-448 MIMAT0008148 Pan troglodytes miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>mml-miR-448 MIMAT0006329 Macaca mulatta miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>cfa-miR-448 MIMAT0001535 Canis familiaris miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>rno-miR-448-3p MIMAT0001534 Rattus norvegicus miR-448-3p
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>mmu-miR-448-3p MIMAT0001533 Mus musculus miR-448-3p
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>hsa-miR-448 MIMAT0001532 Homo sapiens miR-448
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 ttgcatat 8
         ||||||||
Sbjct: 1 ttgcatat 8
>oha-miR-153-3p MIMAT0036738 Ophiophagus hannah miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>chi-miR-153 MIMAT0035983 Capra hircus miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>gsa-miR-153-3p MIMAT0035317 Gyrodactylus salaris miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>efu-miR-153 MIMAT0035106 Eptesicus fuscus miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ssa-miR-153b-3p MIMAT0032391 Salmo salar miR-153b-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ssa-miR-153a-3p MIMAT0032388 Salmo salar miR-153a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>bbe-miR-2061-5p MIMAT0031622 Branchiostoma belcheri miR-2061-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>bbe-miR-153-3p MIMAT0031593 Branchiostoma belcheri miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>lva-miR-153-3p MIMAT0032208 Lytechinus variegatus miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>pmi-miR-153-3p MIMAT0032161 Patiria miniata miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ipu-miR-153b MIMAT0029428 Ictalurus punctatus miR-153b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ccr-miR-153c MIMAT0026230 Cyprinus carpio miR-153c
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ccr-miR-153b MIMAT0026229 Cyprinus carpio miR-153b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>gga-miR-6580-3p MIMAT0025668 Gallus gallus miR-6580-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgcatat 8
         |||||||
Sbjct: 2 tgcatat 8
>bfl-miR-153 MIMAT0025391 Branchiostoma floridae miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cgr-miR-300 MIMAT0023889 Cricetulus griseus miR-300
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 7 ttgcata 1
>aca-miR-153-3p MIMAT0021786 Anolis carolinensis miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>mtr-miR5231 MIMAT0021216 Medicago truncatula miR5231
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 8 ttgcata 2
>emu-miR-153 MIMAT0020269 Echinococcus multilocularis miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>egr-miR-153 MIMAT0020244 Echinococcus granulosus miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>pma-miR-153-3p MIMAT0019484 Petromyzon marinus miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cin-miR-4043-3p MIMAT0016576 Ciona intestinalis miR-4043-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>tgu-miR-153-3p MIMAT0014552 Taeniopygia guttata miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cqu-let-7-3p MIMAT0014367 Culex quinquefasciatus let-7-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 8 ttgcata 2
>bma-miR-153 MIMAT0014119 Brugia malayi miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>eca-miR-153 MIMAT0012936 Equus caballus miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>mdo-miR-153-3p MIMAT0012738 Monodelphis domestica miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>isc-miR-153 MIMAT0012688 Ixodes scapularis miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>dpu-miR-153 MIMAT0012642 Daphnia pulex miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>dps-miR-2543a-3p MIMAT0012345 Drosophila pseudoobscura
         miR-2543a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 7 ttgcata 1
>sme-miR-2163-3p MIMAT0011257 Schmidtea mediterranea miR-2163-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>bfl-miR-2061 MIMAT0009987 Branchiostoma floridae miR-2061
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cfa-miR-153 MIMAT0009840 Canis familiaris miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>spu-miR-153-3p MIMAT0009669 Strongylocentrotus purpuratus
         miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>sko-miR-153 MIMAT0009629 Saccoglossus kowalevskii miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>lgi-miR-153 MIMAT0009582 Lottia gigantea miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cte-miR-153 MIMAT0009528 Capitella teleta miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>bta-miR-153 MIMAT0009239 Bos taurus miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ptr-miR-153 MIMAT0008047 Pan troglodytes miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>csa-miR-153 MIMAT0006130 Ciona savignyi miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cin-miR-153-3p MIMAT0006104 Ciona intestinalis miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>oan-miR-153-3p MIMAT0007005 Ornithorhynchus anatinus miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>mmu-miR-669i MIMAT0005840 Mus musculus miR-669i
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgcatat 8
         |||||||
Sbjct: 1 tgcatat 7
>mmu-miR-669j MIMAT0005838 Mus musculus miR-669j
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 2 tgcatat 8
         |||||||
Sbjct: 1 tgcatat 7
>xtr-miR-153 MIMAT0003607 Xenopus tropicalis miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>tni-miR-153a MIMAT0003012 Tetraodon nigroviridis miR-153a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>fru-miR-153a MIMAT0003011 Fugu rubripes miR-153a
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>tni-miR-153b MIMAT0003002 Tetraodon nigroviridis miR-153b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>fru-miR-153b MIMAT0003001 Fugu rubripes miR-153b
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ggo-miR-153 MIMAT0002274 Gorilla gorilla miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>mne-miR-153 MIMAT0002273 Macaca nemestrina miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ppy-miR-153 MIMAT0002272 Pongo pygmaeus miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>mml-miR-153-3p MIMAT0002271 Macaca mulatta miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>ssc-miR-153 MIMAT0002160 Sus scrofa miR-153
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>dre-miR-153c-3p MIMAT0001850 Danio rerio miR-153c-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>dre-miR-153a-3p MIMAT0001849 Danio rerio miR-153a-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>dre-miR-153b-3p MIMAT0001848 Danio rerio miR-153b-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>gga-miR-153-3p MIMAT0001119 Gallus gallus miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>rno-miR-300-3p MIMAT0000902 Rattus norvegicus miR-300-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 7 ttgcata 1
>rno-miR-153-3p MIMAT0000855 Rattus norvegicus miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>hsa-miR-153-3p MIMAT0000439 Homo sapiens miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>mmu-miR-300-3p MIMAT0000378 Mus musculus miR-300-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 7 ttgcata 1
>mmu-miR-153-3p MIMAT0000163 Mus musculus miR-153-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 1 ttgcata 7
>cel-let-7-3p MIMAT0015091 Caenorhabditis elegans let-7-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 ttgcata 7
         |||||||
Sbjct: 8 ttgcata 2
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 255
Number of extensions: 169
Number of successful extensions: 160
Number of sequences better than 100.0: 75
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 75
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space:   573248
Effective search space used:   573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)