BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mdv1-miR-m2-5p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
eca-miR-9023 MIMAT0034565 Equus caballus miR-9023 14 20
mmu-miR-6951-5p MIMAT0027802 Mus musculus miR-6951-5p 14 20
stu-miR6026-5p MIMAT0031164 Solanum tuberosum miR6026-5p 14 20
mtr-miR5260 MIMAT0021260 Medicago truncatula miR5260 14 20
cel-miR-4809-3p MIMAT0019994 Caenorhabditis elegans miR-4809-3p 14 20
dps-miR-2574a-3p MIMAT0012419 Drosophila pseudoobscura miR-2574a-3p 14 20
dps-miR-2574b MIMAT0012305 Drosophila pseudoobscura miR-2574b 14 20
bta-miR-2480 MIMAT0012072 Bos taurus miR-2480 14 20
dvi-miR-33-3p MIMAT0032067 Drosophila virilis miR-33-3p 14 20
mdv1-miR-M2-5p MIMAT0003921 Mareks disease miR-M2-5p 14 20
dme-miR-33-3p MIMAT0020808 Drosophila melanogaster miR-33-3p 14 20
oha-miR-223-5p MIMAT0036852 Ophiophagus hannah miR-223-5p 12 80
oha-miR-1805-3p MIMAT0036756 Ophiophagus hannah miR-1805-3p 12 80
oha-let-7f-2-3p MIMAT0036638 Ophiophagus hannah let-7f-2-3p 12 80
oha-let-7d-3p MIMAT0036637 Ophiophagus hannah let-7d-3p 12 80
oha-let-7b-3p MIMAT0036635 Ophiophagus hannah let-7b-3p 12 80
tch-let-7a-3p MIMAT0036484 Tupaia chinensis let-7a-3p 12 80
gma-miR9765 MIMAT0036402 Glycine max miR9765 12 80
chi-miR-98-3p MIMAT0036311 Capra hircus miR-98-3p 12 80
chi-miR-655 MIMAT0036282 Capra hircus miR-655 12 80
chi-miR-223-5p MIMAT0036071 Capra hircus miR-223-5p 12 80
chi-let-7f-3p MIMAT0035891 Capra hircus let-7f-3p 12 80
chi-let-7b-3p MIMAT0035883 Capra hircus let-7b-3p 12 80
chi-let-7a-3p MIMAT0035881 Capra hircus let-7a-3p 12 80
bra-miR860-3p MIMAT0035861 Brassica rapa miR860-3p 12 80
nve-miR-9420 MIMAT0035376 Nematostella vectensis miR-9420 12 80
efu-miR-381 MIMAT0035093 Eptesicus fuscus miR-381 12 80
gra-miR8638 MIMAT0034266 Gossypium raimondii miR8638 12 80
atr-miR8553b MIMAT0033828 Amborella trichopoda miR8553b 12 80
str-miR-8381-3p MIMAT0033419 Strongyloides ratti miR-8381-3p 12 80
ppc-miR-8353-5p MIMAT0033266 Pristionchus pacificus miR-8353-5p 12 80
ppc-miR-8345-3p MIMAT0033237 Pristionchus pacificus miR-8345-3p 12 80
ssa-let-7e-3p MIMAT0032706 Salmo salar let-7e-3p 12 80
ssa-let-7a-3-3p MIMAT0032690 Salmo salar let-7a-3-3p 12 80
ssa-let-7h-3p MIMAT0032273 Salmo salar let-7h-3p 12 80
ssa-let-7f-3p MIMAT0032269 Salmo salar let-7f-3p 12 80
ppe-miR7122b-5p MIMAT0031529 Prunus persica miR7122b-5p 12 80
ppe-miR7122a-5p MIMAT0031527 Prunus persica miR7122a-5p 12 80
prd-miR-7965-3p MIMAT0030831 Panagrellus redivivus miR-7965-3p 12 80
lva-miR-2002-3p MIMAT0032223 Lytechinus variegatus miR-2002-3p 12 80
pmi-miR-2002-3p MIMAT0032176 Patiria miniata miR-2002-3p 12 80
aja-miR-3596 MIMAT0031134 Artibeus jamaicensis miR-3596 12 80
mdo-miR-7371g-5p MIMAT0028786 Monodelphis domestica miR-7371g-5p 12 80
mdo-miR-1805-3p MIMAT0028691 Monodelphis domestica miR-1805-3p 12 80
pol-let-7a-3p MIMAT0025417 Paralichthys olivaceus let-7a-3p 12 80
pol-let-7b-3p MIMAT0025415 Paralichthys olivaceus let-7b-3p 12 80
ppe-miR6297b MIMAT0027336 Prunus persica miR6297b 12 80
nta-miR6152b MIMAT0024752 Nicotiana tabacum miR6152b 12 80
nta-miR6152a MIMAT0024751 Nicotiana tabacum miR6152a 12 80
pgi-miR6136b MIMAT0027255 Panax ginseng miR6136b 12 80
ggo-miR-655 MIMAT0024154 Gorilla gorilla miR-655 12 80
ptr-miR-655 MIMAT0024033 Pan troglodytes miR-655 12 80
bna-miR860 MIMAT0023645 Brassica napus miR860 12 80
hco-miR-5897c MIMAT0023380 Haemonchus contortus miR-5897c 12 80
hco-miR-5897b MIMAT0023364 Haemonchus contortus miR-5897b 12 80
hco-miR-5897a MIMAT0023341 Haemonchus contortus miR-5897a 12 80
ola-let-7a-3p MIMAT0022550 Oryzias latipes let-7a-3p 12 80
cel-miR-5592-3p MIMAT0022306 Caenorhabditis elegans miR-5592-3p 12 80
aca-miR-223-5p MIMAT0021893 Anolis carolinensis miR-223-5p 12 80
aca-miR-1805-3p MIMAT0021808 Anolis carolinensis miR-1805-3p 12 80
aca-let-7f-2-3p MIMAT0021705 Anolis carolinensis let-7f-2-3p 12 80
aca-let-7f-1-3p MIMAT0021704 Anolis carolinensis let-7f-1-3p 12 80
aca-let-7d-3p MIMAT0021700 Anolis carolinensis let-7d-3p 12 80
aca-let-7b-3p MIMAT0021695 Anolis carolinensis let-7b-3p 12 80
asu-miR-228-3p MIMAT0021504 Ascaris suum miR-228-3p 12 80
rmi-miR-5318 MIMAT0021390 Rhipicephalus microplus miR-5318 12 80
dme-miR-4910-5p MIMAT0020503 Drosophila melanogaster miR-4910-5p 12 80
hsa-miR-4742-3p MIMAT0019873 Homo sapiens miR-4742-3p 12 80
oar-miR-655-3p MIMAT0019301 Ovis aries miR-655-3p 12 80
oar-miR-381-3p MIMAT0019293 Ovis aries miR-381-3p 12 80
hsa-miR-374c-5p MIMAT0018443 Homo sapiens miR-374c-5p 12 80
cin-miR-4185-3p MIMAT0016803 Ciona intestinalis miR-4185-3p 12 80
rno-miR-3596d MIMAT0017823 Rattus norvegicus miR-3596d 12 80
sja-miR-3484-3p MIMAT0016289 Schistosoma japonicum miR-3484-3p 12 80
ppy-miR-655 MIMAT0016089 Pongo pygmaeus miR-655 12 80
aly-miR857-3p MIMAT0017644 Arabidopsis lyrata miR857-3p 12 80
bmo-miR-3329 MIMAT0015517 Bombyx mori miR-3329 12 80
bmo-miR-3203-5p MIMAT0015379 Bombyx mori miR-3203-5p 12 80
mmu-miR-374c-5p MIMAT0014953 Mus musculus miR-374c-5p 12 80
tgu-let-7d-3p MIMAT0026992 Taeniopygia guttata let-7d-3p 12 80
tgu-let-7f-3p MIMAT0026988 Taeniopygia guttata let-7f-3p 12 80
tgu-let-7a-1-3p MIMAT0031085 Taeniopygia guttata let-7a-1-3p 12 80
tgu-let-7e-3p MIMAT0026982 Taeniopygia guttata let-7e-3p 12 80
tgu-let-7b-3p MIMAT0026975 Taeniopygia guttata let-7b-3p 12 80
tgu-miR-1805-3p MIMAT0014453 Taeniopygia guttata miR-1805-3p 12 80
bhv1-miR-B8-3p MIMAT0013971 Bovine herpesvirus miR-B8-3p 12 80
eca-miR-655 MIMAT0013171 Equus caballus miR-655 12 80
dsi-miR-2489 MIMAT0012510 Drosophila simulans miR-2489 12 80
dps-miR-2539-3p MIMAT0012335 Drosophila pseudoobscura miR-2539-3p 12 80
dme-miR-2489-3p MIMAT0012196 Drosophila melanogaster miR-2489-3p 12 80
sme-miR-2205-3p MIMAT0011409 Schmidtea mediterranea miR-2205-3p 12 80
spu-miR-2002-3p MIMAT0009743 Strongylocentrotus purpuratus miR-2... 12 80
bta-miR-655 MIMAT0009360 Bos taurus miR-655 12 80
dya-miR-280 MIMAT0009065 Drosophila yakuba miR-280 12 80
dwi-miR-280 MIMAT0009028 Drosophila willistoni miR-280 12 80
dvi-miR-280 MIMAT0008965 Drosophila virilis miR-280 12 80
dse-miR-280 MIMAT0008767 Drosophila sechellia miR-280 12 80
dpe-miR-280 MIMAT0008722 Drosophila persimilis miR-280 12 80
dmo-miR-280 MIMAT0008663 Drosophila mojavensis miR-280 12 80
dgr-miR-280 MIMAT0008616 Drosophila grimshawi miR-280 12 80
der-miR-280 MIMAT0008492 Drosophila erecta miR-280 12 80
dan-miR-280 MIMAT0008438 Drosophila ananassae miR-280 12 80
ptr-miR-643 MIMAT0008297 Pan troglodytes miR-643 12 80
mml-miR-643 MIMAT0006484 Macaca mulatta miR-643 12 80
mml-let-7f-3p MIMAT0026793 Macaca mulatta let-7f-3p 12 80
mml-let-7b-3p MIMAT0026790 Macaca mulatta let-7b-3p 12 80
mml-let-7a-3p MIMAT0026789 Macaca mulatta let-7a-3p 12 80
gga-miR-1805-3p MIMAT0007723 Gallus gallus miR-1805-3p 12 80
oan-let-7f-1-3p MIMAT0007180 Ornithorhynchus anatinus let-7f-1-3p 12 80
oan-let-7d-3p MIMAT0007235 Ornithorhynchus anatinus let-7d-3p 12 80
oan-miR-223-5p MIMAT0007019 Ornithorhynchus anatinus miR-223-5p 12 80
oan-let-7e-3p MIMAT0006985 Ornithorhynchus anatinus let-7e-3p 12 80
bta-let-7a-3p MIMAT0004330 Bos taurus let-7a-3p 12 80
ath-miR857 MIMAT0004301 Arabidopsis thaliana miR857 12 80
mdo-let-7f-1-3p MIMAT0026702 Monodelphis domestica let-7f-1-3p 12 80
mdo-miR-223-5p MIMAT0026682 Monodelphis domestica miR-223-5p 12 80
mmu-miR-374b-3p MIMAT0003728 Mus musculus miR-374b-3p 12 80
hsa-miR-655-3p MIMAT0003331 Homo sapiens miR-655-3p 12 80
hsa-miR-643 MIMAT0003313 Homo sapiens miR-643 12 80
dps-miR-280 MIMAT0001244 Drosophila pseudoobscura miR-280 12 80
gga-let-7k-3p MIMAT0026543 Gallus gallus let-7k-3p 12 80
gga-let-7f-3p MIMAT0026528 Gallus gallus let-7f-3p 12 80
gga-let-7a-3p MIMAT0026491 Gallus gallus let-7a-3p 12 80
rno-miR-223-5p MIMAT0017165 Rattus norvegicus miR-223-5p 12 80
rno-miR-98-3p MIMAT0017111 Rattus norvegicus miR-98-3p 12 80
rno-let-7f-1-3p MIMAT0017089 Rattus norvegicus let-7f-1-3p 12 80
rno-let-7c-2-3p MIMAT0017088 Rattus norvegicus let-7c-2-3p 12 80
rno-let-7b-3p MIMAT0004705 Rattus norvegicus let-7b-3p 12 80
rno-let-7a-1-3p MIMAT0017085 Rattus norvegicus let-7a-1-3p 12 80
cbr-lsy-6 MIMAT0000767 Caenorhabditis briggsae lsy-6 12 80
cel-lsy-6-3p MIMAT0000749 Caenorhabditis elegans lsy-6-3p 12 80
mmu-miR-223-5p MIMAT0017056 Mus musculus miR-223-5p 12 80
mmu-miR-98-3p MIMAT0017023 Mus musculus miR-98-3p 12 80
mmu-let-7f-1-3p MIMAT0004623 Mus musculus let-7f-1-3p 12 80
mmu-let-7c-2-3p MIMAT0005439 Mus musculus let-7c-2-3p 12 80
mmu-let-7b-3p MIMAT0004621 Mus musculus let-7b-3p 12 80
mmu-let-7a-1-3p MIMAT0004620 Mus musculus let-7a-1-3p 12 80
dme-let-7-3p MIMAT0020830 Drosophila melanogaster let-7-3p 12 80
dme-miR-280-5p MIMAT0000343 Drosophila melanogaster miR-280-5p 12 80
hsa-miR-223-5p MIMAT0004570 Homo sapiens miR-223-5p 12 80
hsa-miR-98-3p MIMAT0022842 Homo sapiens miR-98-3p 12 80
hsa-let-7f-1-3p MIMAT0004486 Homo sapiens let-7f-1-3p 12 80
hsa-let-7b-3p MIMAT0004482 Homo sapiens let-7b-3p 12 80
hsa-let-7a-3p MIMAT0004481 Homo sapiens let-7a-3p 12 80
>eca-miR-9023 MIMAT0034565 Equus caballus miR-9023
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ttgtatt 7
|||||||
Sbjct: 1 ttgtatt 7
>mmu-miR-6951-5p MIMAT0027802 Mus musculus miR-6951-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ttgtatt 7
|||||||
Sbjct: 1 ttgtatt 7
>stu-miR6026-5p MIMAT0031164 Solanum tuberosum miR6026-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ttgtatt 7
|||||||
Sbjct: 7 ttgtatt 1
>mtr-miR5260 MIMAT0021260 Medicago truncatula miR5260
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ttgtatt 7
|||||||
Sbjct: 2 ttgtatt 8
>cel-miR-4809-3p MIMAT0019994 Caenorhabditis elegans miR-4809-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ttgtatt 7
|||||||
Sbjct: 8 ttgtatt 2
>dps-miR-2574a-3p MIMAT0012419 Drosophila pseudoobscura
miR-2574a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ttgtatt 7
|||||||
Sbjct: 8 ttgtatt 2
>dps-miR-2574b MIMAT0012305 Drosophila pseudoobscura miR-2574b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ttgtatt 7
|||||||
Sbjct: 8 ttgtatt 2
>bta-miR-2480 MIMAT0012072 Bos taurus miR-2480
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ttgtatt 7
|||||||
Sbjct: 2 ttgtatt 8
>dvi-miR-33-3p MIMAT0032067 Drosophila virilis miR-33-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ttgtatt 7
|||||||
Sbjct: 8 ttgtatt 2
>mdv1-miR-M2-5p MIMAT0003921 Mareks disease miR-M2-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ttgtatt 7
|||||||
Sbjct: 2 ttgtatt 8
>dme-miR-33-3p MIMAT0020808 Drosophila melanogaster miR-33-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ttgtatt 7
|||||||
Sbjct: 8 ttgtatt 2
>oha-miR-223-5p MIMAT0036852 Ophiophagus hannah miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 2 tgtatt 7
>oha-miR-1805-3p MIMAT0036756 Ophiophagus hannah miR-1805-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>oha-let-7f-2-3p MIMAT0036638 Ophiophagus hannah let-7f-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>oha-let-7d-3p MIMAT0036637 Ophiophagus hannah let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>oha-let-7b-3p MIMAT0036635 Ophiophagus hannah let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>tch-let-7a-3p MIMAT0036484 Tupaia chinensis let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>gma-miR9765 MIMAT0036402 Glycine max miR9765
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 7 tgtatt 2
>chi-miR-98-3p MIMAT0036311 Capra hircus miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>chi-miR-655 MIMAT0036282 Capra hircus miR-655
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>chi-miR-223-5p MIMAT0036071 Capra hircus miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>chi-let-7f-3p MIMAT0035891 Capra hircus let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>chi-let-7b-3p MIMAT0035883 Capra hircus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>chi-let-7a-3p MIMAT0035881 Capra hircus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>bra-miR860-3p MIMAT0035861 Brassica rapa miR860-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>nve-miR-9420 MIMAT0035376 Nematostella vectensis miR-9420
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 6 ttgtat 1
>efu-miR-381 MIMAT0035093 Eptesicus fuscus miR-381
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>gra-miR8638 MIMAT0034266 Gossypium raimondii miR8638
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>atr-miR8553b MIMAT0033828 Amborella trichopoda miR8553b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>str-miR-8381-3p MIMAT0033419 Strongyloides ratti miR-8381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>ppc-miR-8353-5p MIMAT0033266 Pristionchus pacificus miR-8353-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 6 ttgtat 1
>ppc-miR-8345-3p MIMAT0033237 Pristionchus pacificus miR-8345-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>ssa-let-7e-3p MIMAT0032706 Salmo salar let-7e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ssa-let-7a-3-3p MIMAT0032690 Salmo salar let-7a-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ssa-let-7h-3p MIMAT0032273 Salmo salar let-7h-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ssa-let-7f-3p MIMAT0032269 Salmo salar let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ppe-miR7122b-5p MIMAT0031529 Prunus persica miR7122b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ppe-miR7122a-5p MIMAT0031527 Prunus persica miR7122a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>prd-miR-7965-3p MIMAT0030831 Panagrellus redivivus miR-7965-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>lva-miR-2002-3p MIMAT0032223 Lytechinus variegatus miR-2002-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>pmi-miR-2002-3p MIMAT0032176 Patiria miniata miR-2002-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>aja-miR-3596 MIMAT0031134 Artibeus jamaicensis miR-3596
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mdo-miR-7371g-5p MIMAT0028786 Monodelphis domestica
miR-7371g-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>mdo-miR-1805-3p MIMAT0028691 Monodelphis domestica miR-1805-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>pol-let-7a-3p MIMAT0025417 Paralichthys olivaceus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>pol-let-7b-3p MIMAT0025415 Paralichthys olivaceus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ppe-miR6297b MIMAT0027336 Prunus persica miR6297b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>nta-miR6152b MIMAT0024752 Nicotiana tabacum miR6152b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>nta-miR6152a MIMAT0024751 Nicotiana tabacum miR6152a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>pgi-miR6136b MIMAT0027255 Panax ginseng miR6136b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ggo-miR-655 MIMAT0024154 Gorilla gorilla miR-655
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>ptr-miR-655 MIMAT0024033 Pan troglodytes miR-655
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>bna-miR860 MIMAT0023645 Brassica napus miR860
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>hco-miR-5897c MIMAT0023380 Haemonchus contortus miR-5897c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>hco-miR-5897b MIMAT0023364 Haemonchus contortus miR-5897b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>hco-miR-5897a MIMAT0023341 Haemonchus contortus miR-5897a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>ola-let-7a-3p MIMAT0022550 Oryzias latipes let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>cel-miR-5592-3p MIMAT0022306 Caenorhabditis elegans miR-5592-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>aca-miR-223-5p MIMAT0021893 Anolis carolinensis miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>aca-miR-1805-3p MIMAT0021808 Anolis carolinensis miR-1805-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>aca-let-7f-2-3p MIMAT0021705 Anolis carolinensis let-7f-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>aca-let-7f-1-3p MIMAT0021704 Anolis carolinensis let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>aca-let-7d-3p MIMAT0021700 Anolis carolinensis let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>aca-let-7b-3p MIMAT0021695 Anolis carolinensis let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>asu-miR-228-3p MIMAT0021504 Ascaris suum miR-228-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>rmi-miR-5318 MIMAT0021390 Rhipicephalus microplus miR-5318
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 1 ttgtat 6
>dme-miR-4910-5p MIMAT0020503 Drosophila melanogaster
miR-4910-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>hsa-miR-4742-3p MIMAT0019873 Homo sapiens miR-4742-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>oar-miR-655-3p MIMAT0019301 Ovis aries miR-655-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>oar-miR-381-3p MIMAT0019293 Ovis aries miR-381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>hsa-miR-374c-5p MIMAT0018443 Homo sapiens miR-374c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>cin-miR-4185-3p MIMAT0016803 Ciona intestinalis miR-4185-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>rno-miR-3596d MIMAT0017823 Rattus norvegicus miR-3596d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>sja-miR-3484-3p MIMAT0016289 Schistosoma japonicum miR-3484-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 6 ttgtat 1
>ppy-miR-655 MIMAT0016089 Pongo pygmaeus miR-655
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>aly-miR857-3p MIMAT0017644 Arabidopsis lyrata miR857-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>bmo-miR-3329 MIMAT0015517 Bombyx mori miR-3329
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>bmo-miR-3203-5p MIMAT0015379 Bombyx mori miR-3203-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>mmu-miR-374c-5p MIMAT0014953 Mus musculus miR-374c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>tgu-let-7d-3p MIMAT0026992 Taeniopygia guttata let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7f-3p MIMAT0026988 Taeniopygia guttata let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7a-1-3p MIMAT0031085 Taeniopygia guttata let-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7e-3p MIMAT0026982 Taeniopygia guttata let-7e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>tgu-let-7b-3p MIMAT0026975 Taeniopygia guttata let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>tgu-miR-1805-3p MIMAT0014453 Taeniopygia guttata miR-1805-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>bhv1-miR-B8-3p MIMAT0013971 Bovine herpesvirus miR-B8-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>eca-miR-655 MIMAT0013171 Equus caballus miR-655
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>dsi-miR-2489 MIMAT0012510 Drosophila simulans miR-2489
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>dps-miR-2539-3p MIMAT0012335 Drosophila pseudoobscura
miR-2539-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 6 tgtatt 1
>dme-miR-2489-3p MIMAT0012196 Drosophila melanogaster
miR-2489-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>sme-miR-2205-3p MIMAT0011409 Schmidtea mediterranea miR-2205-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>spu-miR-2002-3p MIMAT0009743 Strongylocentrotus purpuratus
miR-2002-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>bta-miR-655 MIMAT0009360 Bos taurus miR-655
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>dya-miR-280 MIMAT0009065 Drosophila yakuba miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dwi-miR-280 MIMAT0009028 Drosophila willistoni miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dvi-miR-280 MIMAT0008965 Drosophila virilis miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dse-miR-280 MIMAT0008767 Drosophila sechellia miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dpe-miR-280 MIMAT0008722 Drosophila persimilis miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dmo-miR-280 MIMAT0008663 Drosophila mojavensis miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dgr-miR-280 MIMAT0008616 Drosophila grimshawi miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>der-miR-280 MIMAT0008492 Drosophila erecta miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>dan-miR-280 MIMAT0008438 Drosophila ananassae miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>ptr-miR-643 MIMAT0008297 Pan troglodytes miR-643
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>mml-miR-643 MIMAT0006484 Macaca mulatta miR-643
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>mml-let-7f-3p MIMAT0026793 Macaca mulatta let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mml-let-7b-3p MIMAT0026790 Macaca mulatta let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mml-let-7a-3p MIMAT0026789 Macaca mulatta let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>gga-miR-1805-3p MIMAT0007723 Gallus gallus miR-1805-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>oan-let-7f-1-3p MIMAT0007180 Ornithorhynchus anatinus
let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>oan-let-7d-3p MIMAT0007235 Ornithorhynchus anatinus let-7d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>oan-miR-223-5p MIMAT0007019 Ornithorhynchus anatinus miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>oan-let-7e-3p MIMAT0006985 Ornithorhynchus anatinus let-7e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>bta-let-7a-3p MIMAT0004330 Bos taurus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>ath-miR857 MIMAT0004301 Arabidopsis thaliana miR857
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>mdo-let-7f-1-3p MIMAT0026702 Monodelphis domestica let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mdo-miR-223-5p MIMAT0026682 Monodelphis domestica miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 2 tgtatt 7
>mmu-miR-374b-3p MIMAT0003728 Mus musculus miR-374b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>hsa-miR-655-3p MIMAT0003331 Homo sapiens miR-655-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tgtatt 7
||||||
Sbjct: 8 tgtatt 3
>hsa-miR-643 MIMAT0003313 Homo sapiens miR-643
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>dps-miR-280 MIMAT0001244 Drosophila pseudoobscura miR-280
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>gga-let-7k-3p MIMAT0026543 Gallus gallus let-7k-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>gga-let-7f-3p MIMAT0026528 Gallus gallus let-7f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>gga-let-7a-3p MIMAT0026491 Gallus gallus let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>rno-miR-223-5p MIMAT0017165 Rattus norvegicus miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>rno-miR-98-3p MIMAT0017111 Rattus norvegicus miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>rno-let-7f-1-3p MIMAT0017089 Rattus norvegicus let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>rno-let-7c-2-3p MIMAT0017088 Rattus norvegicus let-7c-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>rno-let-7b-3p MIMAT0004705 Rattus norvegicus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>rno-let-7a-1-3p MIMAT0017085 Rattus norvegicus let-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>cbr-lsy-6 MIMAT0000767 Caenorhabditis briggsae lsy-6
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>cel-lsy-6-3p MIMAT0000749 Caenorhabditis elegans lsy-6-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ttgtat 6
||||||
Sbjct: 3 ttgtat 8
>mmu-miR-223-5p MIMAT0017056 Mus musculus miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>mmu-miR-98-3p MIMAT0017023 Mus musculus miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7f-1-3p MIMAT0004623 Mus musculus let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7c-2-3p MIMAT0005439 Mus musculus let-7c-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7b-3p MIMAT0004621 Mus musculus let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>mmu-let-7a-1-3p MIMAT0004620 Mus musculus let-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>dme-let-7-3p MIMAT0020830 Drosophila melanogaster let-7-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>dme-miR-280-5p MIMAT0000343 Drosophila melanogaster miR-280-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 1 tgtatt 6
>hsa-miR-223-5p MIMAT0004570 Homo sapiens miR-223-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tgtatt 7
||||||
Sbjct: 3 tgtatt 8
>hsa-miR-98-3p MIMAT0022842 Homo sapiens miR-98-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>hsa-let-7f-1-3p MIMAT0004486 Homo sapiens let-7f-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>hsa-let-7b-3p MIMAT0004482 Homo sapiens let-7b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
>hsa-let-7a-3p MIMAT0004481 Homo sapiens let-7a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ttgtat 6
||||||
Sbjct: 8 ttgtat 3
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 189
Number of extensions: 178
Number of successful extensions: 144
Number of sequences better than 100.0: 144
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 144
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
