BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= dev-miR-d10-3p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ssc-miR-371-5p MIMAT0037081 Sus scrofa miR-371-5p                      14      20
ocu-miR-290-5p MIMAT0036327 Oryctolagus cuniculus miR-290-5p           14      20
cfa-miR-8812 MIMAT0034302 Canis familiaris miR-8812                    14      20
ppc-miR-8311-3p MIMAT0033153 Pristionchus pacificus miR-8311-3p        14      20
prd-miR-7883c-5p MIMAT0030696 Panagrellus redivivus miR-7883c-5p       14      20
prd-miR-7883b-5p MIMAT0030528 Panagrellus redivivus miR-7883b-5p       14      20
prd-miR-7883a-5p MIMAT0030526 Panagrellus redivivus miR-7883a-5p       14      20
mmu-miR-292b-5p MIMAT0029864 Mus musculus miR-292b-5p                  14      20
mes-miR397 MIMAT0029279 Manihot esculenta miR397                       14      20
ghr-miR7488 MIMAT0029130 Gossypium hirsutum miR7488                    14      20
dev-miR-D10-3p MIMAT0028182 Duck enteritis miR-D10-3p                  14      20
ggo-miR-371b MIMAT0024267 Gorilla gorilla miR-371b                     14      20
ath-miR5645e MIMAT0022446 Arabidopsis thaliana miR5645e                14      20
ath-miR5645f MIMAT0022441 Arabidopsis thaliana miR5645f                14      20
ath-miR5645d MIMAT0022433 Arabidopsis thaliana miR5645d                14      20
ath-miR5645b MIMAT0022409 Arabidopsis thaliana miR5645b                14      20
ath-miR5645a MIMAT0022408 Arabidopsis thaliana miR5645a                14      20
hsa-miR-371b-5p MIMAT0019892 Homo sapiens miR-371b-5p                  14      20
tca-miR-3838-3p MIMAT0018721 Tribolium castaneum miR-3838-3p           14      20
ppy-miR-888 MIMAT0016123 Pongo pygmaeus miR-888                        14      20
ppy-miR-371-5p MIMAT0015858 Pongo pygmaeus miR-371-5p                  14      20
aly-miR3447-3p MIMAT0017730 Arabidopsis lyrata miR3447-3p              14      20
bmo-miR-3296-5p MIMAT0015483 Bombyx mori miR-3296-5p                   14      20
eca-miR-371-5p MIMAT0013013 Equus caballus miR-371-5p                  14      20
rno-miR-295-5p MIMAT0012849 Rattus norvegicus miR-295-5p               14      20
rno-miR-293-5p MIMAT0012847 Rattus norvegicus miR-293-5p               14      20
ptr-miR-373 MIMAT0012802 Pan troglodytes miR-373                       14      20
cfa-miR-371 MIMAT0007747 Canis familiaris miR-371                      14      20
mml-miR-888 MIMAT0006527 Macaca mulatta miR-888                        14      20
mml-miR-371-5p MIMAT0006296 Macaca mulatta miR-371-5p                  14      20
hsa-miR-888-5p MIMAT0004916 Homo sapiens miR-888-5p                    14      20
hsa-miR-616-5p MIMAT0003284 Homo sapiens miR-616-5p                    14      20
rno-miR-292-5p MIMAT0000896 Rattus norvegicus miR-292-5p               14      20
hsa-miR-373-5p MIMAT0000725 Homo sapiens miR-373-5p                    14      20
hsa-miR-371a-5p MIMAT0004687 Homo sapiens miR-371a-5p                  14      20
mmu-miR-295-5p MIMAT0004575 Mus musculus miR-295-5p                    14      20
mmu-miR-294-5p MIMAT0004574 Mus musculus miR-294-5p                    14      20
mmu-miR-293-5p MIMAT0004573 Mus musculus miR-293-5p                    14      20
mmu-miR-292a-5p MIMAT0000369 Mus musculus miR-292a-5p                  14      20
mmu-miR-290a-5p MIMAT0000366 Mus musculus miR-290a-5p                  14      20
tae-miR9653a-3p MIMAT0035760 Triticum aestivum miR9653a-3p             12      80
eca-miR-8945 MIMAT0034474 Equus caballus miR-8945                      12      80
eca-miR-8914 MIMAT0034442 Equus caballus miR-8914                      12      80
pxy-miR-8501 MIMAT0033712 Plutella xylostella miR-8501                 12      80
sma-miR-8429-3p MIMAT0033563 Schistosoma mansoni miR-8429-3p           12      80
str-miR-8388-3p MIMAT0033443 Strongyloides ratti miR-8388-3p           12      80
ppc-miR-8356a-5p MIMAT0033274 Pristionchus pacificus miR-8356a-5p      12      80
ppc-miR-8356b-5p MIMAT0033144 Pristionchus pacificus miR-8356b-5p      12      80
ppc-miR-8307-3p MIMAT0033141 Pristionchus pacificus miR-8307-3p        12      80
bdi-miR7739-3p MIMAT0030215 Brachypodium distachyon miR7739-3p         12      80
bdi-miR5185k-3p MIMAT0030126 Brachypodium distachyon miR5185k-3p       12      80
bdi-miR5185j-3p MIMAT0030124 Brachypodium distachyon miR5185j-3p       12      80
bdi-miR5185i-3p MIMAT0030122 Brachypodium distachyon miR5185i-3p       12      80
bdi-miR5185h-3p MIMAT0030120 Brachypodium distachyon miR5185h-3p       12      80
bdi-miR5185g-3p MIMAT0030118 Brachypodium distachyon miR5185g-3p       12      80
bdi-miR5185f-3p MIMAT0030116 Brachypodium distachyon miR5185f-3p       12      80
bdi-miR5185e-3p MIMAT0030114 Brachypodium distachyon miR5185e-3p       12      80
bdi-miR5185d-3p MIMAT0030112 Brachypodium distachyon miR5185d-3p       12      80
bdi-miR5185c-3p MIMAT0030110 Brachypodium distachyon miR5185c-3p       12      80
lja-miR397 MIMAT0029326 Lotus japonicus miR397                         12      80
gga-miR-7440-5p MIMAT0029034 Gallus gallus miR-7440-5p                 12      80
mmu-miR-7230-3p MIMAT0028429 Mus musculus miR-7230-3p                  12      80
ssc-miR-7140-5p MIMAT0028155 Sus scrofa miR-7140-5p                    12      80
mdm-miR397b MIMAT0025997 Malus domestica miR397b                       12      80
mdm-miR397a MIMAT0025996 Malus domestica miR397a                       12      80
hsa-miR-6715b-3p MIMAT0025843 Homo sapiens miR-6715b-3p                12      80
gga-miR-6569-3p MIMAT0025646 Gallus gallus miR-6569-3p                 12      80
bta-miR-6520 MIMAT0025538 Bos taurus miR-6520                          12      80
ptc-miR6456 MIMAT0025266 Populus trichocarpa miR6456                   12      80
osa-miR6248 MIMAT0024869 Oryza sativa miR6248                          12      80
tca-miR-6009-5p MIMAT0023559 Tribolium castaneum miR-6009-5p           12      80
osa-miR5542 MIMAT0022178 Oryza sativa miR5542                          12      80
osa-miR5518 MIMAT0022152 Oryza sativa miR5518                          12      80
aca-miR-5393 MIMAT0021691 Anolis carolinensis miR-5393                 12      80
sbi-miR5389 MIMAT0021687 Sorghum bicolor miR5389                       12      80
bdi-miR5185b-3p MIMAT0027087 Brachypodium distachyon miR5185b-3p       12      80
bdi-miR5185a-3p MIMAT0027086 Brachypodium distachyon miR5185a-3p       12      80
gma-miR5037a MIMAT0021060 Glycine max miR5037a                         12      80
csi-miR3953 MIMAT0018496 Citrus sinensis miR3953                       12      80
tca-miR-3895-5p MIMAT0018892 Tribolium castaneum miR-3895-5p           12      80
cin-miR-4128-3p MIMAT0016723 Ciona intestinalis miR-4128-3p            12      80
ppy-miR-580 MIMAT0016022 Pongo pygmaeus miR-580                        12      80
rno-miR-294 MIMAT0012848 Rattus norvegicus miR-294                     12      80
bmo-miR-2772a MIMAT0013656 Bombyx mori miR-2772a                       12      80
bmo-miR-2772b MIMAT0013653 Bombyx mori miR-2772b                       12      80
bmo-miR-2744 MIMAT0012623 Bombyx mori miR-2744                         12      80
dme-miR-307b-5p MIMAT0012194 Drosophila melanogaster miR-307b-5p       12      80
dvi-miR-2a-5p MIMAT0032043 Drosophila virilis miR-2a-5p                12      80
mml-miR-580 MIMAT0006441 Macaca mulatta miR-580                        12      80
gga-miR-1707 MIMAT0007599 Gallus gallus miR-1707                       12      80
gma-miR1527 MIMAT0007389 Glycine max miR1527                           12      80
osa-miR1440a MIMAT0005990 Oryza sativa miR1440a                        12      80
hsa-miR-1304-5p MIMAT0005892 Homo sapiens miR-1304-5p                  12      80
smo-miR171c MIMAT0005225 Selaginella moellendorffii miR171c            12      80
dre-miR-732 MIMAT0003762 Danio rerio miR-732                           12      80
dme-miR-2a-1-5p MIMAT0020780 Drosophila melanogaster miR-2a-1-5p       12      80
>ssc-miR-371-5p MIMAT0037081 Sus scrofa miR-371-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>ocu-miR-290-5p MIMAT0036327 Oryctolagus cuniculus miR-290-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>cfa-miR-8812 MIMAT0034302 Canis familiaris miR-8812
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 1 tttgagt 7
>ppc-miR-8311-3p MIMAT0033153 Pristionchus pacificus miR-8311-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>prd-miR-7883c-5p MIMAT0030696 Panagrellus redivivus
         miR-7883c-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>prd-miR-7883b-5p MIMAT0030528 Panagrellus redivivus
         miR-7883b-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>prd-miR-7883a-5p MIMAT0030526 Panagrellus redivivus
         miR-7883a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>mmu-miR-292b-5p MIMAT0029864 Mus musculus miR-292b-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mes-miR397 MIMAT0029279 Manihot esculenta miR397
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 1 tttgagt 7
>ghr-miR7488 MIMAT0029130 Gossypium hirsutum miR7488
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>dev-miR-D10-3p MIMAT0028182 Duck enteritis miR-D10-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>ggo-miR-371b MIMAT0024267 Gorilla gorilla miR-371b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>ath-miR5645e MIMAT0022446 Arabidopsis thaliana miR5645e
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>ath-miR5645f MIMAT0022441 Arabidopsis thaliana miR5645f
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>ath-miR5645d MIMAT0022433 Arabidopsis thaliana miR5645d
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>ath-miR5645b MIMAT0022409 Arabidopsis thaliana miR5645b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>ath-miR5645a MIMAT0022408 Arabidopsis thaliana miR5645a
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>hsa-miR-371b-5p MIMAT0019892 Homo sapiens miR-371b-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>tca-miR-3838-3p MIMAT0018721 Tribolium castaneum miR-3838-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 1 tttgagt 7
>ppy-miR-888 MIMAT0016123 Pongo pygmaeus miR-888
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 8 tttgagt 2
>ppy-miR-371-5p MIMAT0015858 Pongo pygmaeus miR-371-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>aly-miR3447-3p MIMAT0017730 Arabidopsis lyrata miR3447-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 1 tttgagt 7
>bmo-miR-3296-5p MIMAT0015483 Bombyx mori miR-3296-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 2 tttgagt 8
>eca-miR-371-5p MIMAT0013013 Equus caballus miR-371-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>rno-miR-295-5p MIMAT0012849 Rattus norvegicus miR-295-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>rno-miR-293-5p MIMAT0012847 Rattus norvegicus miR-293-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>ptr-miR-373 MIMAT0012802 Pan troglodytes miR-373
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>cfa-miR-371 MIMAT0007747 Canis familiaris miR-371
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mml-miR-888 MIMAT0006527 Macaca mulatta miR-888
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 8 tttgagt 2
>mml-miR-371-5p MIMAT0006296 Macaca mulatta miR-371-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>hsa-miR-888-5p MIMAT0004916 Homo sapiens miR-888-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 8 tttgagt 2
>hsa-miR-616-5p MIMAT0003284 Homo sapiens miR-616-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>rno-miR-292-5p MIMAT0000896 Rattus norvegicus miR-292-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>hsa-miR-373-5p MIMAT0000725 Homo sapiens miR-373-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>hsa-miR-371a-5p MIMAT0004687 Homo sapiens miR-371a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mmu-miR-295-5p MIMAT0004575 Mus musculus miR-295-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mmu-miR-294-5p MIMAT0004574 Mus musculus miR-294-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mmu-miR-293-5p MIMAT0004573 Mus musculus miR-293-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mmu-miR-292a-5p MIMAT0000369 Mus musculus miR-292a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>mmu-miR-290a-5p MIMAT0000366 Mus musculus miR-290a-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgagt 7
         |||||||
Sbjct: 7 tttgagt 1
>tae-miR9653a-3p MIMAT0035760 Triticum aestivum miR9653a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>eca-miR-8945 MIMAT0034474 Equus caballus miR-8945
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 6 tttgag 1
>eca-miR-8914 MIMAT0034442 Equus caballus miR-8914
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>pxy-miR-8501 MIMAT0033712 Plutella xylostella miR-8501
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>sma-miR-8429-3p MIMAT0033563 Schistosoma mansoni miR-8429-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 3 ttgagt 8
>str-miR-8388-3p MIMAT0033443 Strongyloides ratti miR-8388-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>ppc-miR-8356a-5p MIMAT0033274 Pristionchus pacificus
         miR-8356a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 3 tttgag 8
>ppc-miR-8356b-5p MIMAT0033144 Pristionchus pacificus
         miR-8356b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 3 tttgag 8
>ppc-miR-8307-3p MIMAT0033141 Pristionchus pacificus miR-8307-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>bdi-miR7739-3p MIMAT0030215 Brachypodium distachyon miR7739-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>bdi-miR5185k-3p MIMAT0030126 Brachypodium distachyon
         miR5185k-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185j-3p MIMAT0030124 Brachypodium distachyon
         miR5185j-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185i-3p MIMAT0030122 Brachypodium distachyon
         miR5185i-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185h-3p MIMAT0030120 Brachypodium distachyon
         miR5185h-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185g-3p MIMAT0030118 Brachypodium distachyon
         miR5185g-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185f-3p MIMAT0030116 Brachypodium distachyon
         miR5185f-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185e-3p MIMAT0030114 Brachypodium distachyon
         miR5185e-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185d-3p MIMAT0030112 Brachypodium distachyon
         miR5185d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185c-3p MIMAT0030110 Brachypodium distachyon
         miR5185c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>lja-miR397 MIMAT0029326 Lotus japonicus miR397
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 3 ttgagt 8
>gga-miR-7440-5p MIMAT0029034 Gallus gallus miR-7440-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 3 tttgag 8
>mmu-miR-7230-3p MIMAT0028429 Mus musculus miR-7230-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>ssc-miR-7140-5p MIMAT0028155 Sus scrofa miR-7140-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 8 ttgagt 3
>mdm-miR397b MIMAT0025997 Malus domestica miR397b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>mdm-miR397a MIMAT0025996 Malus domestica miR397a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>hsa-miR-6715b-3p MIMAT0025843 Homo sapiens miR-6715b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 6 tttgag 1
>gga-miR-6569-3p MIMAT0025646 Gallus gallus miR-6569-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 2 ttgagt 7
>bta-miR-6520 MIMAT0025538 Bos taurus miR-6520
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>ptc-miR6456 MIMAT0025266 Populus trichocarpa miR6456
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>osa-miR6248 MIMAT0024869 Oryza sativa miR6248
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 3 tttgag 8
>tca-miR-6009-5p MIMAT0023559 Tribolium castaneum miR-6009-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 6 tttgag 1
>osa-miR5542 MIMAT0022178 Oryza sativa miR5542
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>osa-miR5518 MIMAT0022152 Oryza sativa miR5518
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 8 ttgagt 3
>aca-miR-5393 MIMAT0021691 Anolis carolinensis miR-5393
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>sbi-miR5389 MIMAT0021687 Sorghum bicolor miR5389
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 3 ttgagt 8
>bdi-miR5185b-3p MIMAT0027087 Brachypodium distachyon
         miR5185b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>bdi-miR5185a-3p MIMAT0027086 Brachypodium distachyon
         miR5185a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>gma-miR5037a MIMAT0021060 Glycine max miR5037a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 8 tttgag 3
>csi-miR3953 MIMAT0018496 Citrus sinensis miR3953
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>tca-miR-3895-5p MIMAT0018892 Tribolium castaneum miR-3895-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 2 ttgagt 7
>cin-miR-4128-3p MIMAT0016723 Ciona intestinalis miR-4128-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>ppy-miR-580 MIMAT0016022 Pongo pygmaeus miR-580
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>rno-miR-294 MIMAT0012848 Rattus norvegicus miR-294
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 6 tttgag 1
>bmo-miR-2772a MIMAT0013656 Bombyx mori miR-2772a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 3 tttgag 8
>bmo-miR-2772b MIMAT0013653 Bombyx mori miR-2772b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 3 tttgag 8
>bmo-miR-2744 MIMAT0012623 Bombyx mori miR-2744
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>dme-miR-307b-5p MIMAT0012194 Drosophila melanogaster
         miR-307b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 8 ttgagt 3
>dvi-miR-2a-5p MIMAT0032043 Drosophila virilis miR-2a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 8 tttgag 3
>mml-miR-580 MIMAT0006441 Macaca mulatta miR-580
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>gga-miR-1707 MIMAT0007599 Gallus gallus miR-1707
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>gma-miR1527 MIMAT0007389 Glycine max miR1527
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 8 ttgagt 3
>osa-miR1440a MIMAT0005990 Oryza sativa miR1440a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 8 tttgag 3
>hsa-miR-1304-5p MIMAT0005892 Homo sapiens miR-1304-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 1 tttgag 6
>smo-miR171c MIMAT0005225 Selaginella moellendorffii miR171c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgagt 7
         ||||||
Sbjct: 1 ttgagt 6
>dre-miR-732 MIMAT0003762 Danio rerio miR-732
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 6 tttgag 1
>dme-miR-2a-1-5p MIMAT0020780 Drosophila melanogaster
         miR-2a-1-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgag 6
         ||||||
Sbjct: 8 tttgag 3
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 149
Number of extensions: 109
Number of successful extensions: 96
Number of sequences better than 100.0: 96
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 96
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)