BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tumv-miR-s77
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

hsa-miR-5688 MIMAT0022479 Homo sapiens miR-5688                        14      20
osa-miR5513 MIMAT0022146 Oryza sativa miR5513                          14      20
ath-miR5017-5p MIMAT0032120 Arabidopsis thaliana miR5017-5p            14      20
dme-miR-4967-3p MIMAT0020193 Drosophila melanogaster miR-4967-3p       14      20
ath-miR4239 MIMAT0017947 Arabidopsis thaliana miR4239                  14      20
bmo-miR-3358 MIMAT0015544 Bombyx mori miR-3358                         14      20
dps-miR-2575-5p MIMAT0012420 Drosophila pseudoobscura miR-2575-5p      14      20
ata-miR2275a-3p MIMAT0037111 Aegilops tauschii miR2275a-3p             12      80
tae-miR9773 MIMAT0036983 Triticum aestivum miR9773                     12      80
gra-miR827b MIMAT0036968 Gossypium raimondii miR827b                   12      80
oha-miR-7-3-3p MIMAT0036948 Ophiophagus hannah miR-7-3-3p              12      80
oha-miR-375-3p MIMAT0036918 Ophiophagus hannah miR-375-3p              12      80
chi-miR-7-3p MIMAT0036289 Capra hircus miR-7-3p                        12      80
chi-miR-545-3p MIMAT0036278 Capra hircus miR-545-3p                    12      80
chi-miR-544-5p MIMAT0036276 Capra hircus miR-544-5p                    12      80
chi-miR-1814 MIMAT0036000 Capra hircus miR-1814                        12      80
dvi-miR-375-3p MIMAT0035569 Drosophila virilis miR-375-3p              12      80
cfa-miR-8881 MIMAT0034381 Canis familiaris miR-8881                    12      80
gra-miR8762d MIMAT0034214 Gossypium raimondii miR8762d                 12      80
gra-miR7502c MIMAT0034014 Gossypium raimondii miR7502c                 12      80
gra-miR7502b MIMAT0034013 Gossypium raimondii miR7502b                 12      80
ppc-miR-8264-5p MIMAT0033012 Pristionchus pacificus miR-8264-5p        12      80
ppc-miR-8240-3p MIMAT0032937 Pristionchus pacificus miR-8240-3p        12      80
ssa-miR-375-3p MIMAT0032626 Salmo salar miR-375-3p                     12      80
bbe-miR-375-3p MIMAT0031676 Branchiostoma belcheri miR-375-3p          12      80
stu-miR827-5p MIMAT0031272 Solanum tuberosum miR827-5p                 12      80
hsa-miR-8068 MIMAT0030995 Homo sapiens miR-8068                        12      80
bdi-miR166h-5p MIMAT0030087 Brachypodium distachyon miR166h-5p         12      80
pmi-miR-375-3p MIMAT0032173 Patiria miniata miR-375-3p                 12      80
sci-miR-7642-5p MIMAT0029783 Sycon ciliatum miR-7642-5p                12      80
cbn-miR-355 MIMAT0029771 Caenorhabditis brenneri miR-355               12      80
cbn-miR-356 MIMAT0029679 Caenorhabditis brenneri miR-356               12      80
ipu-miR-375 MIMAT0029508 Ictalurus punctatus miR-375                   12      80
ssc-miR-7142-3p MIMAT0028160 Sus scrofa miR-7142-3p                    12      80
sbi-miR6230-3p MIMAT0026437 Sorghum bicolor miR6230-3p                 12      80
ccr-miR-459-5p MIMAT0026304 Cyprinus carpio miR-459-5p                 12      80
ccr-miR-375 MIMAT0026295 Cyprinus carpio miR-375                       12      80
meu-miR-6313 MIMAT0025021 Macropus eugenii miR-6313                    12      80
ggo-miR-375 MIMAT0024189 Gorilla gorilla miR-375                       12      80
osa-miR5827 MIMAT0023301 Oryza sativa miR5827                          12      80
ath-miR833b MIMAT0022419 Arabidopsis thaliana miR833b                  12      80
cel-miR-356b-3p MIMAT0022312 Caenorhabditis elegans miR-356b-3p        12      80
aca-miR-375-3p MIMAT0021951 Anolis carolinensis miR-375-3p             12      80
asu-miR-375-3p MIMAT0021526 Ascaris suum miR-375-3p                    12      80
mmu-miR-5101 MIMAT0020608 Mus musculus miR-5101                        12      80
pma-miR-4576 MIMAT0019609 Petromyzon marinus miR-4576                  12      80
pma-miR-375b-3p MIMAT0019545 Petromyzon marinus miR-375b-3p            12      80
pma-miR-375a-3p MIMAT0019543 Petromyzon marinus miR-375a-3p            12      80
oar-miR-544-5p MIMAT0019298 Ovis aries miR-544-5p                      12      80
ngi-miR-375 MIMAT0018384 Nasonia giraulti miR-375                      12      80
gma-miR4409 MIMAT0018328 Glycine max miR4409                           12      80
gma-miR4408 MIMAT0018327 Glycine max miR4408                           12      80
gma-miR4364b MIMAT0018234 Glycine max miR4364b                         12      80
tca-miR-375-3p MIMAT0018795 Tribolium castaneum miR-375-3p             12      80
cin-miR-4164-3p MIMAT0016772 Ciona intestinalis miR-4164-3p            12      80
cin-miR-4154-3p MIMAT0016758 Ciona intestinalis miR-4154-3p            12      80
cin-miR-4072-5p MIMAT0016632 Ciona intestinalis miR-4072-5p            12      80
rno-miR-3065-5p MIMAT0017839 Rattus norvegicus miR-3065-5p             12      80
ppy-miR-375 MIMAT0015863 Pongo pygmaeus miR-375                        12      80
nvi-miR-375 MIMAT0015699 Nasonia vitripennis miR-375                   12      80
aly-miR852-5p MIMAT0017639 Arabidopsis lyrata miR852-5p                12      80
aly-miR827-5p MIMAT0017607 Arabidopsis lyrata miR827-5p                12      80
bmo-miR-2733i-5p MIMAT0015591 Bombyx mori miR-2733i-5p                 12      80
hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p                  12      80
mmu-miR-3065-5p MIMAT0014836 Mus musculus miR-3065-5p                  12      80
tgu-miR-375 MIMAT0014572 Taeniopygia guttata miR-375                   12      80
cqu-miR-375 MIMAT0014443 Culex quinquefasciatus miR-375                12      80
aae-miR-375 MIMAT0014298 Aedes aegypti miR-375                         12      80
zma-miR827-5p MIMAT0015365 Zea mays miR827-5p                          12      80
eca-miR-545 MIMAT0013239 Equus caballus miR-545                        12      80
bmo-miR-375-3p MIMAT0013649 Bombyx mori miR-375-3p                     12      80
isc-miR-375 MIMAT0012700 Ixodes scapularis miR-375                     12      80
dpu-miR-375 MIMAT0012664 Daphnia pulex miR-375                         12      80
dsi-miR-982a MIMAT0012515 Drosophila simulans miR-982a                 12      80
dsi-miR-375-3p MIMAT0012490 Drosophila simulans miR-375-3p             12      80
dps-miR-375-3p MIMAT0012254 Drosophila pseudoobscura miR-375-3p        12      80
bta-miR-1814c MIMAT0011984 Bos taurus miR-1814c                        12      80
bta-miR-2325a MIMAT0011854 Bos taurus miR-2325a                        12      80
bta-miR-2310 MIMAT0011822 Bos taurus miR-2310                          12      80
zma-miR2275d-3p MIMAT0011774 Zea mays miR2275d-3p                      12      80
zma-miR2275a-3p MIMAT0011768 Zea mays miR2275a-3p                      12      80
crm-miR-356 MIMAT0011611 Caenorhabditis remanei miR-356                12      80
crm-miR-355 MIMAT0011535 Caenorhabditis remanei miR-355                12      80
cfa-miR-375 MIMAT0009871 Canis familiaris miR-375                      12      80
sko-miR-375 MIMAT0009683 Saccoglossus kowalevskii miR-375              12      80
lgi-miR-375 MIMAT0009676 Lottia gigantea miR-375                       12      80
cte-miR-375 MIMAT0009544 Capitella teleta miR-375                      12      80
ptr-miR-375 MIMAT0008125 Pan troglodytes miR-375                       12      80
aga-miR-375 MIMAT0007860 Anopheles gambiae miR-375                     12      80
mml-miR-375 MIMAT0006302 Macaca mulatta miR-375                        12      80
gga-miR-1808 MIMAT0007726 Gallus gallus miR-1808                       12      80
cin-miR-126-5p MIMAT0015258 Ciona intestinalis miR-126-5p              12      80
xtr-miR-375 MIMAT0005565 Xenopus tropicalis miR-375                    12      80
rno-miR-375-3p MIMAT0005307 Rattus norvegicus miR-375-3p               12      80
smo-miR1112-5p MIMAT0005269 Selaginella moellendorffii miR1112-5p      12      80
dme-miR-375-3p MIMAT0005472 Drosophila melanogaster miR-375-3p         12      80
ame-miR-375 MIMAT0004431 Apis mellifera miR-375                        12      80
mmu-miR-544-5p MIMAT0017282 Mus musculus miR-544-5p                    12      80
ath-miR833a-5p MIMAT0004252 Arabidopsis thaliana miR833a-5p            12      80
gga-miR-375 MIMAT0003362 Gallus gallus miR-375                         12      80
tni-miR-375 MIMAT0003070 Tetraodon nigroviridis miR-375                12      80
fru-miR-375 MIMAT0003069 Fugu rubripes miR-375                         12      80
dre-miR-375 MIMAT0001876 Danio rerio miR-375                           12      80
zma-miR166j-5p MIMAT0015185 Zea mays miR166j-5p                        12      80
cbr-miR-355 MIMAT0001319 Caenorhabditis briggsae miR-355               12      80
osa-miR166k-5p MIMAT0022870 Oryza sativa miR166k-5p                    12      80
mmu-miR-375-3p MIMAT0000739 Mus musculus miR-375-3p                    12      80
hsa-miR-375 MIMAT0000728 Homo sapiens miR-375                          12      80
cel-miR-355-5p MIMAT0000697 Caenorhabditis elegans miR-355-5p          12      80
rno-miR-7a-1-3p MIMAT0000607 Rattus norvegicus miR-7a-1-3p             12      80
>hsa-miR-5688 MIMAT0022479 Homo sapiens miR-5688
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 7 tttgtta 1
>osa-miR5513 MIMAT0022146 Oryza sativa miR5513
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 7 tttgtta 1
>ath-miR5017-5p MIMAT0032120 Arabidopsis thaliana miR5017-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 2 tttgtta 8
>dme-miR-4967-3p MIMAT0020193 Drosophila melanogaster
         miR-4967-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 7 tttgtta 1
>ath-miR4239 MIMAT0017947 Arabidopsis thaliana miR4239
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 1 tttgtta 7
>bmo-miR-3358 MIMAT0015544 Bombyx mori miR-3358
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 2 tttgtta 8
>dps-miR-2575-5p MIMAT0012420 Drosophila pseudoobscura
         miR-2575-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 tttgtta 7
         |||||||
Sbjct: 1 tttgtta 7
>ata-miR2275a-3p MIMAT0037111 Aegilops tauschii miR2275a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>tae-miR9773 MIMAT0036983 Triticum aestivum miR9773
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>gra-miR827b MIMAT0036968 Gossypium raimondii miR827b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>oha-miR-7-3-3p MIMAT0036948 Ophiophagus hannah miR-7-3-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>oha-miR-375-3p MIMAT0036918 Ophiophagus hannah miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>chi-miR-7-3p MIMAT0036289 Capra hircus miR-7-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 6 tttgtt 1
>chi-miR-545-3p MIMAT0036278 Capra hircus miR-545-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>chi-miR-544-5p MIMAT0036276 Capra hircus miR-544-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 3 ttgtta 8
>chi-miR-1814 MIMAT0036000 Capra hircus miR-1814
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>dvi-miR-375-3p MIMAT0035569 Drosophila virilis miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cfa-miR-8881 MIMAT0034381 Canis familiaris miR-8881
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>gra-miR8762d MIMAT0034214 Gossypium raimondii miR8762d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 1 ttgtta 6
>gra-miR7502c MIMAT0034014 Gossypium raimondii miR7502c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 1 ttgtta 6
>gra-miR7502b MIMAT0034013 Gossypium raimondii miR7502b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 1 ttgtta 6
>ppc-miR-8264-5p MIMAT0033012 Pristionchus pacificus miR-8264-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ppc-miR-8240-3p MIMAT0032937 Pristionchus pacificus miR-8240-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ssa-miR-375-3p MIMAT0032626 Salmo salar miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>bbe-miR-375-3p MIMAT0031676 Branchiostoma belcheri miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>stu-miR827-5p MIMAT0031272 Solanum tuberosum miR827-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>hsa-miR-8068 MIMAT0030995 Homo sapiens miR-8068
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>bdi-miR166h-5p MIMAT0030087 Brachypodium distachyon miR166h-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>pmi-miR-375-3p MIMAT0032173 Patiria miniata miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>sci-miR-7642-5p MIMAT0029783 Sycon ciliatum miR-7642-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 3 ttgtta 8
>cbn-miR-355 MIMAT0029771 Caenorhabditis brenneri miR-355
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cbn-miR-356 MIMAT0029679 Caenorhabditis brenneri miR-356
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ipu-miR-375 MIMAT0029508 Ictalurus punctatus miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ssc-miR-7142-3p MIMAT0028160 Sus scrofa miR-7142-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>sbi-miR6230-3p MIMAT0026437 Sorghum bicolor miR6230-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 6 ttgtta 1
>ccr-miR-459-5p MIMAT0026304 Cyprinus carpio miR-459-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 8 ttgtta 3
>ccr-miR-375 MIMAT0026295 Cyprinus carpio miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>meu-miR-6313 MIMAT0025021 Macropus eugenii miR-6313
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ggo-miR-375 MIMAT0024189 Gorilla gorilla miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>osa-miR5827 MIMAT0023301 Oryza sativa miR5827
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ath-miR833b MIMAT0022419 Arabidopsis thaliana miR833b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>cel-miR-356b-3p MIMAT0022312 Caenorhabditis elegans miR-356b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>aca-miR-375-3p MIMAT0021951 Anolis carolinensis miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>asu-miR-375-3p MIMAT0021526 Ascaris suum miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>mmu-miR-5101 MIMAT0020608 Mus musculus miR-5101
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>pma-miR-4576 MIMAT0019609 Petromyzon marinus miR-4576
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>pma-miR-375b-3p MIMAT0019545 Petromyzon marinus miR-375b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>pma-miR-375a-3p MIMAT0019543 Petromyzon marinus miR-375a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>oar-miR-544-5p MIMAT0019298 Ovis aries miR-544-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 3 ttgtta 8
>ngi-miR-375 MIMAT0018384 Nasonia giraulti miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>gma-miR4409 MIMAT0018328 Glycine max miR4409
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 6 ttgtta 1
>gma-miR4408 MIMAT0018327 Glycine max miR4408
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 6 ttgtta 1
>gma-miR4364b MIMAT0018234 Glycine max miR4364b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 6 ttgtta 1
>tca-miR-375-3p MIMAT0018795 Tribolium castaneum miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cin-miR-4164-3p MIMAT0016772 Ciona intestinalis miR-4164-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>cin-miR-4154-3p MIMAT0016758 Ciona intestinalis miR-4154-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cin-miR-4072-5p MIMAT0016632 Ciona intestinalis miR-4072-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>rno-miR-3065-5p MIMAT0017839 Rattus norvegicus miR-3065-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>ppy-miR-375 MIMAT0015863 Pongo pygmaeus miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>nvi-miR-375 MIMAT0015699 Nasonia vitripennis miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>aly-miR852-5p MIMAT0017639 Arabidopsis lyrata miR852-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>aly-miR827-5p MIMAT0017607 Arabidopsis lyrata miR827-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>bmo-miR-2733i-5p MIMAT0015591 Bombyx mori miR-2733i-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 3 ttgtta 8
>hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>mmu-miR-3065-5p MIMAT0014836 Mus musculus miR-3065-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>tgu-miR-375 MIMAT0014572 Taeniopygia guttata miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cqu-miR-375 MIMAT0014443 Culex quinquefasciatus miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>aae-miR-375 MIMAT0014298 Aedes aegypti miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>zma-miR827-5p MIMAT0015365 Zea mays miR827-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>eca-miR-545 MIMAT0013239 Equus caballus miR-545
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
>bmo-miR-375-3p MIMAT0013649 Bombyx mori miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>isc-miR-375 MIMAT0012700 Ixodes scapularis miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>dpu-miR-375 MIMAT0012664 Daphnia pulex miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>dsi-miR-982a MIMAT0012515 Drosophila simulans miR-982a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 7 ttgtta 2
>dsi-miR-375-3p MIMAT0012490 Drosophila simulans miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>dps-miR-375-3p MIMAT0012254 Drosophila pseudoobscura miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>bta-miR-1814c MIMAT0011984 Bos taurus miR-1814c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>bta-miR-2325a MIMAT0011854 Bos taurus miR-2325a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>bta-miR-2310 MIMAT0011822 Bos taurus miR-2310
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>zma-miR2275d-3p MIMAT0011774 Zea mays miR2275d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>zma-miR2275a-3p MIMAT0011768 Zea mays miR2275a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>crm-miR-356 MIMAT0011611 Caenorhabditis remanei miR-356
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>crm-miR-355 MIMAT0011535 Caenorhabditis remanei miR-355
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cfa-miR-375 MIMAT0009871 Canis familiaris miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>sko-miR-375 MIMAT0009683 Saccoglossus kowalevskii miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>lgi-miR-375 MIMAT0009676 Lottia gigantea miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cte-miR-375 MIMAT0009544 Capitella teleta miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ptr-miR-375 MIMAT0008125 Pan troglodytes miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>aga-miR-375 MIMAT0007860 Anopheles gambiae miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>mml-miR-375 MIMAT0006302 Macaca mulatta miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>gga-miR-1808 MIMAT0007726 Gallus gallus miR-1808
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cin-miR-126-5p MIMAT0015258 Ciona intestinalis miR-126-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 3 ttgtta 8
>xtr-miR-375 MIMAT0005565 Xenopus tropicalis miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>rno-miR-375-3p MIMAT0005307 Rattus norvegicus miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>smo-miR1112-5p MIMAT0005269 Selaginella moellendorffii
         miR1112-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>dme-miR-375-3p MIMAT0005472 Drosophila melanogaster miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>ame-miR-375 MIMAT0004431 Apis mellifera miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>mmu-miR-544-5p MIMAT0017282 Mus musculus miR-544-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ttgtta 7
         ||||||
Sbjct: 3 ttgtta 8
>ath-miR833a-5p MIMAT0004252 Arabidopsis thaliana miR833a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>gga-miR-375 MIMAT0003362 Gallus gallus miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>tni-miR-375 MIMAT0003070 Tetraodon nigroviridis miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>fru-miR-375 MIMAT0003069 Fugu rubripes miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>dre-miR-375 MIMAT0001876 Danio rerio miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>zma-miR166j-5p MIMAT0015185 Zea mays miR166j-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>cbr-miR-355 MIMAT0001319 Caenorhabditis briggsae miR-355
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>osa-miR166k-5p MIMAT0022870 Oryza sativa miR166k-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 3 tttgtt 8
>mmu-miR-375-3p MIMAT0000739 Mus musculus miR-375-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>hsa-miR-375 MIMAT0000728 Homo sapiens miR-375
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>cel-miR-355-5p MIMAT0000697 Caenorhabditis elegans miR-355-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 1 tttgtt 6
>rno-miR-7a-1-3p MIMAT0000607 Rattus norvegicus miR-7a-1-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 tttgtt 6
         ||||||
Sbjct: 8 tttgtt 3
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 163
Number of extensions: 156
Number of successful extensions: 110
Number of sequences better than 100.0: 110
Number of HSP's gapped: 110
Number of HSP's successfully gapped: 110
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)