BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ebv-miR-bart19-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ata-miR2275a-3p MIMAT0037111 Aegilops tauschii miR2275a-3p 14 20
tae-miR9773 MIMAT0036983 Triticum aestivum miR9773 14 20
gra-miR827b MIMAT0036968 Gossypium raimondii miR827b 14 20
chi-miR-495-3p MIMAT0036256 Capra hircus miR-495-3p 14 20
efu-miR-495 MIMAT0035031 Eptesicus fuscus miR-495 14 20
cfa-miR-8881 MIMAT0034381 Canis familiaris miR-8881 14 20
cbn-miR-355 MIMAT0029771 Caenorhabditis brenneri miR-355 14 20
ggo-miR-495 MIMAT0024104 Gorilla gorilla miR-495 14 20
tca-miR-6010-5p MIMAT0023561 Tribolium castaneum miR-6010-5p 14 20
mmu-miR-5101 MIMAT0020608 Mus musculus miR-5101 14 20
pma-miR-4576 MIMAT0019609 Petromyzon marinus miR-4576 14 20
oar-miR-495-3p MIMAT0019274 Ovis aries miR-495-3p 14 20
cin-miR-4072-5p MIMAT0016632 Ciona intestinalis miR-4072-5p 14 20
ppy-miR-495 MIMAT0015916 Pongo pygmaeus miR-495 14 20
rlcv-miR-rL1-29-3p MIMAT0016953 Rhesus lymphocryptovirus miR-rL1... 14 20
eca-miR-495 MIMAT0013165 Equus caballus miR-495 14 20
zma-miR2275d-3p MIMAT0011774 Zea mays miR2275d-3p 14 20
zma-miR2275a-3p MIMAT0011768 Zea mays miR2275a-3p 14 20
crm-miR-355 MIMAT0011535 Caenorhabditis remanei miR-355 14 20
bta-miR-495 MIMAT0009335 Bos taurus miR-495 14 20
ptr-miR-495 MIMAT0008169 Pan troglodytes miR-495 14 20
cfa-miR-495 MIMAT0006721 Canis familiaris miR-495 14 20
mml-miR-495-3p MIMAT0006357 Macaca mulatta miR-495-3p 14 20
mmu-miR-1192 MIMAT0005850 Mus musculus miR-1192 14 20
rno-miR-495 MIMAT0005320 Rattus norvegicus miR-495 14 20
ebv-miR-BART19-3p MIMAT0003718 Epstein Barr miR-BART19-3p 14 20
mmu-miR-495-3p MIMAT0003456 Mus musculus miR-495-3p 14 20
hsa-miR-495-3p MIMAT0002817 Homo sapiens miR-495-3p 14 20
cbr-miR-355 MIMAT0001319 Caenorhabditis briggsae miR-355 14 20
cel-miR-355-5p MIMAT0000697 Caenorhabditis elegans miR-355-5p 14 20
ata-miR2275b-3p MIMAT0037125 Aegilops tauschii miR2275b-3p 12 80
oha-miR-7-3-3p MIMAT0036948 Ophiophagus hannah miR-7-3-3p 12 80
oha-miR-375-3p MIMAT0036918 Ophiophagus hannah miR-375-3p 12 80
chi-miR-7-3p MIMAT0036289 Capra hircus miR-7-3p 12 80
chi-miR-545-3p MIMAT0036278 Capra hircus miR-545-3p 12 80
chi-miR-1814 MIMAT0036000 Capra hircus miR-1814 12 80
bra-miR9567-5p MIMAT0035693 Brassica rapa miR9567-5p 12 80
dvi-miR-375-3p MIMAT0035569 Drosophila virilis miR-375-3p 12 80
gsa-miR-76b-5p MIMAT0035334 Gyrodactylus salaris miR-76b-5p 12 80
gsa-miR-76a-5p MIMAT0035286 Gyrodactylus salaris miR-76a-5p 12 80
cfa-miR-8843 MIMAT0034336 Canis familiaris miR-8843 12 80
pxy-miR-8490 MIMAT0033698 Plutella xylostella miR-8490 12 80
ppc-miR-8264-5p MIMAT0033012 Pristionchus pacificus miR-8264-5p 12 80
ppc-miR-8240-3p MIMAT0032937 Pristionchus pacificus miR-8240-3p 12 80
ssa-miR-375-3p MIMAT0032626 Salmo salar miR-375-3p 12 80
bbe-miR-375-3p MIMAT0031676 Branchiostoma belcheri miR-375-3p 12 80
stu-miR827-5p MIMAT0031272 Solanum tuberosum miR827-5p 12 80
hsa-miR-8068 MIMAT0030995 Homo sapiens miR-8068 12 80
bdi-miR7735-5p MIMAT0030206 Brachypodium distachyon miR7735-5p 12 80
bdi-miR7723a-5p MIMAT0030172 Brachypodium distachyon miR7723a-5p 12 80
bdi-miR166h-5p MIMAT0030087 Brachypodium distachyon miR166h-5p 12 80
pmi-miR-375-3p MIMAT0032173 Patiria miniata miR-375-3p 12 80
cbn-miR-356 MIMAT0029679 Caenorhabditis brenneri miR-356 12 80
ipu-miR-375 MIMAT0029508 Ictalurus punctatus miR-375 12 80
mmu-miR-7234-5p MIMAT0028436 Mus musculus miR-7234-5p 12 80
mml-miR-7192-3p MIMAT0028343 Macaca mulatta miR-7192-3p 12 80
ssc-miR-7142-3p MIMAT0028160 Sus scrofa miR-7142-3p 12 80
ccr-miR-375 MIMAT0026295 Cyprinus carpio miR-375 12 80
ddi-miR-7104 MIMAT0028107 Dictyostelium discoideum miR-7104 12 80
meu-miR-6313 MIMAT0025021 Macropus eugenii miR-6313 12 80
ggo-miR-375 MIMAT0024189 Gorilla gorilla miR-375 12 80
stu-miR6024-5p MIMAT0031159 Solanum tuberosum miR6024-5p 12 80
osa-miR5827 MIMAT0023301 Oryza sativa miR5827 12 80
mtr-miR5752b MIMAT0023134 Medicago truncatula miR5752b 12 80
mtr-miR5752a MIMAT0023133 Medicago truncatula miR5752a 12 80
tur-miR-210-5p MIMAT0023070 Tetranychus urticae miR-210-5p 12 80
ath-miR833b MIMAT0022419 Arabidopsis thaliana miR833b 12 80
ath-miR5650 MIMAT0022416 Arabidopsis thaliana miR5650 12 80
cel-miR-356b-3p MIMAT0022312 Caenorhabditis elegans miR-356b-3p 12 80
sbi-miR5565e MIMAT0022243 Sorghum bicolor miR5565e 12 80
osa-miR2275d MIMAT0022158 Oryza sativa miR2275d 12 80
aca-miR-375-3p MIMAT0021951 Anolis carolinensis miR-375-3p 12 80
asu-miR-375-3p MIMAT0021526 Ascaris suum miR-375-3p 12 80
pma-miR-375b-3p MIMAT0019545 Petromyzon marinus miR-375b-3p 12 80
pma-miR-375a-3p MIMAT0019543 Petromyzon marinus miR-375a-3p 12 80
ngi-miR-375 MIMAT0018384 Nasonia giraulti miR-375 12 80
tca-miR-375-3p MIMAT0018795 Tribolium castaneum miR-375-3p 12 80
ath-miR4239 MIMAT0017947 Arabidopsis thaliana miR4239 12 80
cin-miR-4203-3p MIMAT0016823 Ciona intestinalis miR-4203-3p 12 80
cin-miR-4164-3p MIMAT0016772 Ciona intestinalis miR-4164-3p 12 80
cin-miR-4154-3p MIMAT0016758 Ciona intestinalis miR-4154-3p 12 80
cin-miR-4084-3p MIMAT0016658 Ciona intestinalis miR-4084-3p 12 80
rno-miR-3065-5p MIMAT0017839 Rattus norvegicus miR-3065-5p 12 80
gso-miR1510a MIMAT0016356 Glycine soja miR1510a 12 80
gso-miR1510b MIMAT0016355 Glycine soja miR1510b 12 80
ppy-miR-375 MIMAT0015863 Pongo pygmaeus miR-375 12 80
nvi-miR-375 MIMAT0015699 Nasonia vitripennis miR-375 12 80
aly-miR837-5p MIMAT0017687 Arabidopsis lyrata miR837-5p 12 80
aly-miR852-5p MIMAT0017639 Arabidopsis lyrata miR852-5p 12 80
aly-miR840-3p MIMAT0017626 Arabidopsis lyrata miR840-3p 12 80
aly-miR827-5p MIMAT0017607 Arabidopsis lyrata miR827-5p 12 80
bmo-miR-3236 MIMAT0015419 Bombyx mori miR-3236 12 80
hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p 12 80
mmu-miR-3065-5p MIMAT0014836 Mus musculus miR-3065-5p 12 80
tgu-miR-375 MIMAT0014572 Taeniopygia guttata miR-375 12 80
cqu-miR-375 MIMAT0014443 Culex quinquefasciatus miR-375 12 80
aae-miR-375 MIMAT0014298 Aedes aegypti miR-375 12 80
osa-miR2920 MIMAT0014051 Oryza sativa miR2920 12 80
zma-miR827-5p MIMAT0015365 Zea mays miR827-5p 12 80
osa-miR2864.2 MIMAT0013811 Oryza sativa miR2864.2 12 80
eca-miR-545 MIMAT0013239 Equus caballus miR-545 12 80
bmo-miR-375-3p MIMAT0013649 Bombyx mori miR-375-3p 12 80
isc-miR-375 MIMAT0012700 Ixodes scapularis miR-375 12 80
dpu-miR-375 MIMAT0012664 Daphnia pulex miR-375 12 80
mtr-miR2676f MIMAT0013503 Medicago truncatula miR2676f 12 80
mtr-miR2676e MIMAT0013502 Medicago truncatula miR2676e 12 80
mtr-miR2676d MIMAT0013501 Medicago truncatula miR2676d 12 80
mtr-miR2676c MIMAT0013500 Medicago truncatula miR2676c 12 80
mtr-miR2676b MIMAT0013499 Medicago truncatula miR2676b 12 80
mtr-miR2676a MIMAT0013498 Medicago truncatula miR2676a 12 80
dsi-miR-375-3p MIMAT0012490 Drosophila simulans miR-375-3p 12 80
dps-miR-2575-5p MIMAT0012420 Drosophila pseudoobscura miR-2575-5p 12 80
dps-miR-375-3p MIMAT0012254 Drosophila pseudoobscura miR-375-3p 12 80
bta-miR-1814c MIMAT0011984 Bos taurus miR-1814c 12 80
bta-miR-2325c MIMAT0011934 Bos taurus miR-2325c 12 80
bta-miR-2325a MIMAT0011854 Bos taurus miR-2325a 12 80
bta-miR-2310 MIMAT0011822 Bos taurus miR-2310 12 80
ppc-miR-2256 MIMAT0011680 Pristionchus pacificus miR-2256 12 80
crm-miR-356 MIMAT0011611 Caenorhabditis remanei miR-356 12 80
gma-miR1510b-3p MIMAT0010082 Glycine max miR1510b-3p 12 80
cfa-miR-375 MIMAT0009871 Canis familiaris miR-375 12 80
sko-miR-375 MIMAT0009683 Saccoglossus kowalevskii miR-375 12 80
lgi-miR-375 MIMAT0009676 Lottia gigantea miR-375 12 80
cte-miR-375 MIMAT0009544 Capitella teleta miR-375 12 80
ptr-miR-375 MIMAT0008125 Pan troglodytes miR-375 12 80
aga-miR-375 MIMAT0007860 Anopheles gambiae miR-375 12 80
mml-miR-375 MIMAT0006302 Macaca mulatta miR-375 12 80
gga-miR-1808 MIMAT0007726 Gallus gallus miR-1808 12 80
gga-miR-1787 MIMAT0007699 Gallus gallus miR-1787 12 80
xtr-miR-375 MIMAT0005565 Xenopus tropicalis miR-375 12 80
rno-miR-375-3p MIMAT0005307 Rattus norvegicus miR-375-3p 12 80
smo-miR1112-5p MIMAT0005269 Selaginella moellendorffii miR1112-5p 12 80
smo-miR1101-3p MIMAT0005258 Selaginella moellendorffii miR1101-3p 12 80
dme-miR-375-3p MIMAT0005472 Drosophila melanogaster miR-375-3p 12 80
ame-miR-375 MIMAT0004431 Apis mellifera miR-375 12 80
ath-miR840-3p MIMAT0032021 Arabidopsis thaliana miR840-3p 12 80
ath-miR833a-5p MIMAT0004252 Arabidopsis thaliana miR833a-5p 12 80
gga-miR-375 MIMAT0003362 Gallus gallus miR-375 12 80
tni-miR-375 MIMAT0003070 Tetraodon nigroviridis miR-375 12 80
fru-miR-375 MIMAT0003069 Fugu rubripes miR-375 12 80
dre-miR-375 MIMAT0001876 Danio rerio miR-375 12 80
zma-miR166j-5p MIMAT0015185 Zea mays miR166j-5p 12 80
osa-miR166k-5p MIMAT0022870 Oryza sativa miR166k-5p 12 80
mmu-miR-375-3p MIMAT0000739 Mus musculus miR-375-3p 12 80
hsa-miR-375 MIMAT0000728 Homo sapiens miR-375 12 80
rno-miR-7a-1-3p MIMAT0000607 Rattus norvegicus miR-7a-1-3p 12 80
>ata-miR2275a-3p MIMAT0037111 Aegilops tauschii miR2275a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>tae-miR9773 MIMAT0036983 Triticum aestivum miR9773
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>gra-miR827b MIMAT0036968 Gossypium raimondii miR827b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>chi-miR-495-3p MIMAT0036256 Capra hircus miR-495-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>efu-miR-495 MIMAT0035031 Eptesicus fuscus miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>cfa-miR-8881 MIMAT0034381 Canis familiaris miR-8881
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>cbn-miR-355 MIMAT0029771 Caenorhabditis brenneri miR-355
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>ggo-miR-495 MIMAT0024104 Gorilla gorilla miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>tca-miR-6010-5p MIMAT0023561 Tribolium castaneum miR-6010-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 2 tttgttt 8
>mmu-miR-5101 MIMAT0020608 Mus musculus miR-5101
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>pma-miR-4576 MIMAT0019609 Petromyzon marinus miR-4576
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>oar-miR-495-3p MIMAT0019274 Ovis aries miR-495-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>cin-miR-4072-5p MIMAT0016632 Ciona intestinalis miR-4072-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>ppy-miR-495 MIMAT0015916 Pongo pygmaeus miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>rlcv-miR-rL1-29-3p MIMAT0016953 Rhesus lymphocryptovirus
miR-rL1-29-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 2 tttgttt 8
>eca-miR-495 MIMAT0013165 Equus caballus miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>zma-miR2275d-3p MIMAT0011774 Zea mays miR2275d-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>zma-miR2275a-3p MIMAT0011768 Zea mays miR2275a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>crm-miR-355 MIMAT0011535 Caenorhabditis remanei miR-355
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>bta-miR-495 MIMAT0009335 Bos taurus miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>ptr-miR-495 MIMAT0008169 Pan troglodytes miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>cfa-miR-495 MIMAT0006721 Canis familiaris miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>mml-miR-495-3p MIMAT0006357 Macaca mulatta miR-495-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>mmu-miR-1192 MIMAT0005850 Mus musculus miR-1192
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>rno-miR-495 MIMAT0005320 Rattus norvegicus miR-495
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>ebv-miR-BART19-3p MIMAT0003718 Epstein Barr miR-BART19-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 2 tttgttt 8
>mmu-miR-495-3p MIMAT0003456 Mus musculus miR-495-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>hsa-miR-495-3p MIMAT0002817 Homo sapiens miR-495-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tttgttt 7
|||||||
Sbjct: 7 tttgttt 1
>cbr-miR-355 MIMAT0001319 Caenorhabditis briggsae miR-355
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>cel-miR-355-5p MIMAT0000697 Caenorhabditis elegans miR-355-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tttgttt 7
|||||||
Sbjct: 1 tttgttt 7
>ata-miR2275b-3p MIMAT0037125 Aegilops tauschii miR2275b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 2 ttgttt 7
>oha-miR-7-3-3p MIMAT0036948 Ophiophagus hannah miR-7-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>oha-miR-375-3p MIMAT0036918 Ophiophagus hannah miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>chi-miR-7-3p MIMAT0036289 Capra hircus miR-7-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 6 tttgtt 1
>chi-miR-545-3p MIMAT0036278 Capra hircus miR-545-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>chi-miR-1814 MIMAT0036000 Capra hircus miR-1814
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>bra-miR9567-5p MIMAT0035693 Brassica rapa miR9567-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 7 ttgttt 2
>dvi-miR-375-3p MIMAT0035569 Drosophila virilis miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>gsa-miR-76b-5p MIMAT0035334 Gyrodactylus salaris miR-76b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>gsa-miR-76a-5p MIMAT0035286 Gyrodactylus salaris miR-76a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 2 ttgttt 7
>cfa-miR-8843 MIMAT0034336 Canis familiaris miR-8843
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>pxy-miR-8490 MIMAT0033698 Plutella xylostella miR-8490
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>ppc-miR-8264-5p MIMAT0033012 Pristionchus pacificus miR-8264-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ppc-miR-8240-3p MIMAT0032937 Pristionchus pacificus miR-8240-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ssa-miR-375-3p MIMAT0032626 Salmo salar miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>bbe-miR-375-3p MIMAT0031676 Branchiostoma belcheri miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>stu-miR827-5p MIMAT0031272 Solanum tuberosum miR827-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>hsa-miR-8068 MIMAT0030995 Homo sapiens miR-8068
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>bdi-miR7735-5p MIMAT0030206 Brachypodium distachyon miR7735-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>bdi-miR7723a-5p MIMAT0030172 Brachypodium distachyon
miR7723a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 8 ttgttt 3
>bdi-miR166h-5p MIMAT0030087 Brachypodium distachyon miR166h-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>pmi-miR-375-3p MIMAT0032173 Patiria miniata miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>cbn-miR-356 MIMAT0029679 Caenorhabditis brenneri miR-356
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ipu-miR-375 MIMAT0029508 Ictalurus punctatus miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>mmu-miR-7234-5p MIMAT0028436 Mus musculus miR-7234-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>mml-miR-7192-3p MIMAT0028343 Macaca mulatta miR-7192-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>ssc-miR-7142-3p MIMAT0028160 Sus scrofa miR-7142-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ccr-miR-375 MIMAT0026295 Cyprinus carpio miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ddi-miR-7104 MIMAT0028107 Dictyostelium discoideum miR-7104
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 6 ttgttt 1
>meu-miR-6313 MIMAT0025021 Macropus eugenii miR-6313
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ggo-miR-375 MIMAT0024189 Gorilla gorilla miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>stu-miR6024-5p MIMAT0031159 Solanum tuberosum miR6024-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 8 ttgttt 3
>osa-miR5827 MIMAT0023301 Oryza sativa miR5827
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>mtr-miR5752b MIMAT0023134 Medicago truncatula miR5752b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>mtr-miR5752a MIMAT0023133 Medicago truncatula miR5752a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>tur-miR-210-5p MIMAT0023070 Tetranychus urticae miR-210-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>ath-miR833b MIMAT0022419 Arabidopsis thaliana miR833b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>ath-miR5650 MIMAT0022416 Arabidopsis thaliana miR5650
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>cel-miR-356b-3p MIMAT0022312 Caenorhabditis elegans miR-356b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>sbi-miR5565e MIMAT0022243 Sorghum bicolor miR5565e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>osa-miR2275d MIMAT0022158 Oryza sativa miR2275d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 2 ttgttt 7
>aca-miR-375-3p MIMAT0021951 Anolis carolinensis miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>asu-miR-375-3p MIMAT0021526 Ascaris suum miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>pma-miR-375b-3p MIMAT0019545 Petromyzon marinus miR-375b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>pma-miR-375a-3p MIMAT0019543 Petromyzon marinus miR-375a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ngi-miR-375 MIMAT0018384 Nasonia giraulti miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>tca-miR-375-3p MIMAT0018795 Tribolium castaneum miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ath-miR4239 MIMAT0017947 Arabidopsis thaliana miR4239
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>cin-miR-4203-3p MIMAT0016823 Ciona intestinalis miR-4203-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 7 ttgttt 2
>cin-miR-4164-3p MIMAT0016772 Ciona intestinalis miR-4164-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>cin-miR-4154-3p MIMAT0016758 Ciona intestinalis miR-4154-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>cin-miR-4084-3p MIMAT0016658 Ciona intestinalis miR-4084-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 6 ttgttt 1
>rno-miR-3065-5p MIMAT0017839 Rattus norvegicus miR-3065-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>gso-miR1510a MIMAT0016356 Glycine soja miR1510a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>gso-miR1510b MIMAT0016355 Glycine soja miR1510b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>ppy-miR-375 MIMAT0015863 Pongo pygmaeus miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>nvi-miR-375 MIMAT0015699 Nasonia vitripennis miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>aly-miR837-5p MIMAT0017687 Arabidopsis lyrata miR837-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>aly-miR852-5p MIMAT0017639 Arabidopsis lyrata miR852-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>aly-miR840-3p MIMAT0017626 Arabidopsis lyrata miR840-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>aly-miR827-5p MIMAT0017607 Arabidopsis lyrata miR827-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>bmo-miR-3236 MIMAT0015419 Bombyx mori miR-3236
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 8 ttgttt 3
>hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>mmu-miR-3065-5p MIMAT0014836 Mus musculus miR-3065-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>tgu-miR-375 MIMAT0014572 Taeniopygia guttata miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>cqu-miR-375 MIMAT0014443 Culex quinquefasciatus miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>aae-miR-375 MIMAT0014298 Aedes aegypti miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>osa-miR2920 MIMAT0014051 Oryza sativa miR2920
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ttgttt 7
||||||
Sbjct: 6 ttgttt 1
>zma-miR827-5p MIMAT0015365 Zea mays miR827-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>osa-miR2864.2 MIMAT0013811 Oryza sativa miR2864.2
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>eca-miR-545 MIMAT0013239 Equus caballus miR-545
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
>bmo-miR-375-3p MIMAT0013649 Bombyx mori miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>isc-miR-375 MIMAT0012700 Ixodes scapularis miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>dpu-miR-375 MIMAT0012664 Daphnia pulex miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>mtr-miR2676f MIMAT0013503 Medicago truncatula miR2676f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>mtr-miR2676e MIMAT0013502 Medicago truncatula miR2676e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>mtr-miR2676d MIMAT0013501 Medicago truncatula miR2676d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>mtr-miR2676c MIMAT0013500 Medicago truncatula miR2676c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>mtr-miR2676b MIMAT0013499 Medicago truncatula miR2676b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>mtr-miR2676a MIMAT0013498 Medicago truncatula miR2676a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>dsi-miR-375-3p MIMAT0012490 Drosophila simulans miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>dps-miR-2575-5p MIMAT0012420 Drosophila pseudoobscura
miR-2575-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>dps-miR-375-3p MIMAT0012254 Drosophila pseudoobscura miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>bta-miR-1814c MIMAT0011984 Bos taurus miR-1814c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>bta-miR-2325c MIMAT0011934 Bos taurus miR-2325c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>bta-miR-2325a MIMAT0011854 Bos taurus miR-2325a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>bta-miR-2310 MIMAT0011822 Bos taurus miR-2310
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>ppc-miR-2256 MIMAT0011680 Pristionchus pacificus miR-2256
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>crm-miR-356 MIMAT0011611 Caenorhabditis remanei miR-356
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>gma-miR1510b-3p MIMAT0010082 Glycine max miR1510b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>cfa-miR-375 MIMAT0009871 Canis familiaris miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>sko-miR-375 MIMAT0009683 Saccoglossus kowalevskii miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>lgi-miR-375 MIMAT0009676 Lottia gigantea miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>cte-miR-375 MIMAT0009544 Capitella teleta miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ptr-miR-375 MIMAT0008125 Pan troglodytes miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>aga-miR-375 MIMAT0007860 Anopheles gambiae miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>mml-miR-375 MIMAT0006302 Macaca mulatta miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>gga-miR-1808 MIMAT0007726 Gallus gallus miR-1808
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>gga-miR-1787 MIMAT0007699 Gallus gallus miR-1787
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 3 ttgttt 8
>xtr-miR-375 MIMAT0005565 Xenopus tropicalis miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>rno-miR-375-3p MIMAT0005307 Rattus norvegicus miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>smo-miR1112-5p MIMAT0005269 Selaginella moellendorffii
miR1112-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>smo-miR1101-3p MIMAT0005258 Selaginella moellendorffii
miR1101-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>dme-miR-375-3p MIMAT0005472 Drosophila melanogaster miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ame-miR-375 MIMAT0004431 Apis mellifera miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>ath-miR840-3p MIMAT0032021 Arabidopsis thaliana miR840-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ttgttt 7
||||||
Sbjct: 1 ttgttt 6
>ath-miR833a-5p MIMAT0004252 Arabidopsis thaliana miR833a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>gga-miR-375 MIMAT0003362 Gallus gallus miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>tni-miR-375 MIMAT0003070 Tetraodon nigroviridis miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>fru-miR-375 MIMAT0003069 Fugu rubripes miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>dre-miR-375 MIMAT0001876 Danio rerio miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>zma-miR166j-5p MIMAT0015185 Zea mays miR166j-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>osa-miR166k-5p MIMAT0022870 Oryza sativa miR166k-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 3 tttgtt 8
>mmu-miR-375-3p MIMAT0000739 Mus musculus miR-375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>hsa-miR-375 MIMAT0000728 Homo sapiens miR-375
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 tttgtt 6
||||||
Sbjct: 1 tttgtt 6
>rno-miR-7a-1-3p MIMAT0000607 Rattus norvegicus miR-7a-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 tttgtt 6
||||||
Sbjct: 8 tttgtt 3
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 207
Number of extensions: 177
Number of successful extensions: 146
Number of sequences better than 100.0: 146
Number of HSP's gapped: 146
Number of HSP's successfully gapped: 146
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
