| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gggtttt | 7 | ||
| VMR_0056 | bmnpv-miR-2 | 2 | ....... | 8 | 100 |
| VMR_1110 | rrv-miR-rr1-3-3p | 2 | ......_ | 7 | 85 |
| VMR_1109 | rrv-miR-rr1-3-3p | 3 | ......_ | 8 | 85 |
| VMR_0270 | hpv6-miR-h1 | 2 | _...... | 7 | 85 |
