| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ggtcgtgg | 8 | ||
| VMR_0448 | mcmv-miR-m95-1-5p | 1 | ........ | 8 | 100 |
| VMR_0996 | rlcv-miR-rl1-22-5p | 1 | __...... | 6 | 75 |
| VMR_0994 | rlcv-miR-rl1-22-5p | 1 | __...... | 6 | 75 |
| VMR_0920 | rcmv-miR-r37-1 | 3 | _......_ | 8 | 75 |
