| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | acagagc | 7 | ||
| VMR_1254 | tumv-miR-s70 | 2 | ....... | 8 | 100 |
| VMR_1234 | tumv-miR-s52 | 6 | _...... | 1 | 85 |
| VMR_0185 | hbv-miR-b3rc-3p | 8 | _...... | 3 | 85 |
| VMR_0147 | hbv-miR-3rc-3p | 8 | _...... | 3 | 85 |
