| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | agtggat | 7 | ||
| VMR_0741 | prv-miR-5-5p | 1 | ....... | 7 | 100 |
| VMR_0735 | prv-miR-5-5p | 1 | ....... | 7 | 100 |
| VMR_0734 | prv-miR-5-5p | 2 | ....... | 8 | 100 |
| VMR_0730 | prv-miR-5-5p | 1 | ....... | 7 | 100 |
| VMR_0726 | prv-miR-5-5p | 2 | ....... | 8 | 100 |
| VMR_0722 | prv-miR-5-5p | 1 | ....... | 7 | 100 |
| VMR_0237 | hcmv-miR-us25-2-3p | 7 | ....... | 1 | 100 |
| VMR_1256 | tumv-miR-s72 | 1 | ......_ | 6 | 85 |
| VMR_0988 | rlcv-miR-rl1-20-3p | 2 | _...... | 7 | 85 |
| VMR_0740 | prv-miR-5-5p | 3 | ......_ | 8 | 85 |
| VMR_0736 | prv-miR-5-5p | 1 | _...... | 6 | 85 |
| VMR_0733 | prv-miR-5-5p | 3 | ......_ | 8 | 85 |
| VMR_0729 | prv-miR-5-5p | 3 | ......_ | 8 | 85 |
| VMR_0725 | prv-miR-5-5p | 3 | ......_ | 8 | 85 |
| VMR_0720 | prv-miR-5-5p | 3 | ......_ | 8 | 85 |
| VMR_0755 | prv-miR-7-3p | 6 | ......_ | 1 | 85 |
| VMR_0714 | prv-miR-5 | 3 | ......_ | 8 | 85 |
| VMR_0058 | bmnpv-miR-4 | 2 | _...... | 7 | 85 |
