| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | cgcgaacc | 8 | ||
| VMR_0082 | dev-miR-d23-3p | 1 | ........ | 8 | 100 |
| VMR_0542 | mghv-miR-m1-3* | 2 | _....... | 8 | 87 |
| VMR_0913 | rcmv-miR-r111.2-6 | 6 | ......__ | 1 | 75 |
| VMR_0912 | rcmv-miR-r111.2-6 | 6 | ......__ | 1 | 75 |
| VMR_0911 | rcmv-miR-r111.2-6 | 6 | ......__ | 1 | 75 |
