| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ctgagata | 8 | ||
| VMR_0364 | hvt-miR-h18-3p | 1 | ........ | 8 | 100 |
| VMR_1238 | tumv-miR-s56 | 7 | _....... | 1 | 87 |
| VMR_0534 | mghv-miR-m1-13-3p | 7 | _....... | 1 | 87 |
| VMR_0389 | jcv-miR-j1-5p | 3 | ......__ | 8 | 75 |
| VMR_0039 | bkv-miR-b1-5p | 3 | ......__ | 8 | 75 |
