| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gagttgtt | 8 | ||
| VMR_1292 | wssv-miR36-3p | 1 | ........ | 8 | 100 |
| VMR_1294 | wssv-miR45 | 8 | _......_ | 3 | 75 |
| VMR_1175 | sgiv-miR-5 | 7 | __...... | 2 | 75 |
| VMR_0998 | rlcv-miR-rl1-23-3p | 3 | _......_ | 8 | 75 |
| VMR_0545 | mghv-miR-m1-5 | 2 | ......__ | 7 | 75 |
| VMR_0119 | ebv-miR-bart21-3p | 3 | _......_ | 8 | 75 |
