| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gcgttgtc | 8 | ||
| VMR_0454 | mdv1-miR-m10-5p | 1 | ........ | 8 | 100 |
| VMR_1286 | wssv-miR201 | 1 | _......_ | 6 | 75 |
| VMR_0910 | rcmv-miR-r111.2-5 | 3 | _......_ | 8 | 75 |
| VMR_0251 | hhv6b-miR-ro6-1* | 2 | ......__ | 7 | 75 |
