| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gggttcct | 8 | ||
| VMR_0568 | ohv2-miR-17-24 | 1 | ........ | 8 | 100 |
| VMR_1229 | tumv-miR-s48 | 6 | _......_ | 1 | 75 |
| VMR_1123 | rrv-miR-rr1-5 | 8 | _......_ | 3 | 75 |
| VMR_0924 | rcmv-miR-r43.1-2 | 3 | ......__ | 8 | 75 |
| VMR_0554 | mghv-miR-m1-9* | 3 | _......_ | 8 | 75 |
| VMR_0425 | mcmv-miR-m01-3* | 8 | __...... | 3 | 75 |
