| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tggggac | 7 | ||
| VMR_0620 | prv-miR-11-1 | 2 | ....... | 8 | 100 |
| VMR_0611 | prv-miR-11-1 | 2 | ....... | 8 | 100 |
| VMR_0585 | ohv2-miR-61-1 | 2 | ....... | 8 | 100 |
| VMR_1122 | rrv-miR-rr1-4-5p | 1 | ......_ | 6 | 85 |
| VMR_1119 | rrv-miR-rr1-4-5p | 1 | ......_ | 6 | 85 |
| VMR_1113 | rrv-miR-rr1-4 | 1 | ......_ | 6 | 85 |
| VMR_0738 | prv-miR-5-5p | 1 | ......_ | 6 | 85 |
| VMR_0727 | prv-miR-5-5p | 1 | ......_ | 6 | 85 |
| VMR_0723 | prv-miR-5-5p | 1 | ......_ | 6 | 85 |
| VMR_0615 | prv-miR-11-1 | 1 | _...... | 6 | 85 |
