| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | atggttc | 7 | ||
| MIMAT0036838 | oha-miR-218-2-3p | 1 | ....... | 7 | 100 |
| MIMAT0032400 | ssa-miR-15c-2-3p | 8 | ....... | 2 | 100 |
| MIMAT0030673 | prd-miR-7907b-3p | 8 | ....... | 2 | 100 |
| MIMAT0031111 | mdo-miR-218-2-3p | 1 | ....... | 7 | 100 |
| MIMAT0017969 | ssc-miR-218-3p | 1 | ....... | 7 | 100 |
| MIMAT0017724 | aly-miR3445-5p.1 | 8 | ....... | 2 | 100 |
| MIMAT0031080 | mml-miR-218-1-3p | 1 | ....... | 7 | 100 |
| MIMAT0026680 | mdo-miR-218-1-3p | 1 | ....... | 7 | 100 |
| MIMAT0003925 | mdv1-miR-M4-3p | 2 | ....... | 8 | 100 |
| MIMAT0026589 | mml-miR-218-2-3p | 1 | ....... | 7 | 100 |
| MIMAT0015159 | osa-miR396e-3p | 1 | ....... | 7 | 100 |
| MIMAT0026518 | gga-miR-218-3p | 2 | ....... | 8 | 100 |
| MIMAT0004740 | rno-miR-218a-2-3p | 2 | ....... | 8 | 100 |
| MIMAT0005444 | mmu-miR-218-2-3p | 2 | ....... | 8 | 100 |
| MIMAT0004566 | hsa-miR-218-2-3p | 2 | ....... | 8 | 100 |
| MIMAT0004565 | hsa-miR-218-1-3p | 1 | ....... | 7 | 100 |
| MIMAT0036837 | oha-miR-218-1-3p | 1 | ......_ | 6 | 85 |
| MIMAT0036810 | oha-miR-203-5p | 3 | _...... | 8 | 85 |
| MIMAT0036765 | oha-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0036197 | chi-miR-380-5p | 1 | ......_ | 6 | 85 |
| MIMAT0035808 | tae-miR9679-5p | 8 | _...... | 3 | 85 |
| MIMAT0035054 | efu-miR-181a | 6 | ......_ | 1 | 85 |
| MIMAT0034821 | efu-miR-9223g | 1 | _...... | 6 | 85 |
| MIMAT0034587 | eca-miR-9044 | 3 | ......_ | 8 | 85 |
| MIMAT0034478 | eca-miR-8949 | 6 | _...... | 1 | 85 |
| MIMAT0033963 | esi-miR8622c | 2 | _...... | 7 | 85 |
| MIMAT0033959 | esi-miR8622b | 3 | _...... | 8 | 85 |
| MIMAT0033957 | esi-miR8622a | 3 | _...... | 8 | 85 |
| MIMAT0032834 | cel-miR-8208-3p | 2 | _...... | 7 | 85 |
| MIMAT0032525 | ssa-miR-218-3p | 3 | ......_ | 8 | 85 |
| MIMAT0032486 | ssa-miR-203b-5p | 3 | _...... | 8 | 85 |
| MIMAT0032485 | ssa-miR-203a-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0032483 | ssa-miR-203a-5p | 3 | _...... | 8 | 85 |
| MIMAT0032428 | ssa-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0031664 | bbe-miR-29b-5p | 3 | _...... | 8 | 85 |
| MIMAT0030996 | hsa-miR-8069 | 3 | ......_ | 8 | 85 |
| MIMAT0030558 | prd-miR-2-5p | 6 | ......_ | 1 | 85 |
| MIMAT0029458 | ipu-miR-203b | 3 | _...... | 8 | 85 |
| MIMAT0029457 | ipu-miR-203a | 3 | _...... | 8 | 85 |
| MIMAT0028883 | mdo-miR-7392-3p | 8 | ......_ | 3 | 85 |
| MIMAT0028769 | mdo-miR-15c-3p | 8 | ......_ | 3 | 85 |
| MIMAT0028203 | dre-miR-7146-5p | 8 | ......_ | 3 | 85 |
| MIMAT0026261 | ccr-miR-203b-5p | 3 | _...... | 8 | 85 |
| MIMAT0026242 | ccr-miR-182-3p | 2 | _...... | 7 | 85 |
| MIMAT0027997 | mmu-miR-7046-3p | 7 | _...... | 2 | 85 |
| MIMAT0027987 | mmu-miR-7041-3p | 1 | _...... | 6 | 85 |
| MIMAT0027785 | mmu-miR-6942-3p | 3 | ......_ | 8 | 85 |
| MIMAT0027721 | mmu-miR-6910-3p | 3 | ......_ | 8 | 85 |
| MIMAT0025659 | gga-miR-6576-5p | 3 | ......_ | 8 | 85 |
| MIMAT0025442 | pol-miR-203-5p | 3 | _...... | 8 | 85 |
| MIMAT0025439 | pol-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0025124 | mmu-miR-6378 | 1 | _...... | 6 | 85 |
| MIMAT0024127 | ggo-miR-584 | 3 | ......_ | 8 | 85 |
| MIMAT0023653 | bna-miR6033 | 7 | _...... | 2 | 85 |
| MIMAT0021851 | aca-miR-203-5p | 3 | _...... | 8 | 85 |
| MIMAT0021812 | aca-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0021400 | rmi-miR-5327 | 3 | ......_ | 8 | 85 |
| MIMAT0021318 | mtr-miR5279 | 8 | _...... | 3 | 85 |
| MIMAT0027079 | bdi-miR166g-5p | 3 | _...... | 8 | 85 |
| MIMAT0019530 | pma-miR-218a-3p | 1 | ......_ | 6 | 85 |
| MIMAT0019513 | pma-miR-203b-5p | 3 | _...... | 8 | 85 |
| MIMAT0019511 | pma-miR-203a-5p | 3 | _...... | 8 | 85 |
| MIMAT0019253 | oar-miR-380-5p | 1 | ......_ | 6 | 85 |
| MIMAT0018675 | tca-miR-3824-3p | 1 | ......_ | 6 | 85 |
| MIMAT0016698 | cin-miR-4110-5p | 6 | ......_ | 1 | 85 |
| MIMAT0016027 | ppy-miR-584 | 3 | ......_ | 8 | 85 |
| MIMAT0015712 | ssc-miR-299 | 1 | ......_ | 6 | 85 |
| MIMAT0015521 | bmo-miR-3334 | 7 | _...... | 2 | 85 |
| MIMAT0027022 | tgu-miR-203-5p | 3 | _...... | 8 | 85 |
| MIMAT0019140 | bfl-miR-29b-5p | 3 | _...... | 8 | 85 |
| MIMAT0032052 | dvi-miR-263b-3p | 2 | _...... | 7 | 85 |
| MIMAT0015282 | dsi-miR-312-5p | 1 | _...... | 6 | 85 |
| MIMAT0008257 | ptr-miR-584 | 3 | ......_ | 8 | 85 |
| MIMAT0020359 | cel-miR-1820-3p | 6 | ......_ | 1 | 85 |
| MIMAT0026909 | mml-miR-758-5p | 1 | ......_ | 6 | 85 |
| MIMAT0006446 | mml-miR-584-5p | 3 | ......_ | 8 | 85 |
| MIMAT0026866 | mml-miR-380-5p | 1 | ......_ | 6 | 85 |
| MIMAT0015262 | cin-miR-183-3p | 2 | _...... | 7 | 85 |
| MIMAT0005431 | cre-miR1173 | 1 | ......_ | 6 | 85 |
| MIMAT0005308 | rno-miR-380-5p | 1 | ......_ | 6 | 85 |
| MIMAT0004320 | ath-miR869.1 | 3 | _...... | 8 | 85 |
| MIMAT0026672 | mdo-miR-182-3p | 2 | _...... | 7 | 85 |
| MIMAT0003611 | xtr-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0003337 | hsa-miR-659-3p | 3 | _...... | 8 | 85 |
| MIMAT0026619 | hsa-miR-597-3p | 1 | _...... | 6 | 85 |
| MIMAT0003249 | hsa-miR-584-5p | 3 | ......_ | 8 | 85 |
| MIMAT0003094 | tni-miR-182 | 1 | _...... | 6 | 85 |
| MIMAT0003093 | fru-miR-182 | 1 | _...... | 6 | 85 |
| MIMAT0002256 | mne-miR-140 | 3 | _...... | 8 | 85 |
| MIMAT0002189 | kshv-miR-K12-6-3p | 3 | ......_ | 8 | 85 |
| MIMAT0003407 | dre-miR-203b-5p | 3 | _...... | 8 | 85 |
| MIMAT0031923 | dre-miR-203a-5p | 3 | _...... | 8 | 85 |
| MIMAT0001272 | dre-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0017153 | rno-miR-203a-5p | 3 | _...... | 8 | 85 |
| MIMAT0000744 | mmu-miR-380-5p | 1 | ......_ | 6 | 85 |
| MIMAT0000639 | osa-miR166e-3p | 8 | _...... | 3 | 85 |
| MIMAT0020838 | dme-miR-312-5p | 1 | _...... | 6 | 85 |
| MIMAT0020822 | dme-miR-263b-3p | 2 | _...... | 7 | 85 |
| MIMAT0031890 | hsa-miR-203a-5p | 3 | _...... | 8 | 85 |
| MIMAT0000260 | hsa-miR-182-3p | 1 | _...... | 6 | 85 |
| MIMAT0004559 | hsa-miR-181c-3p | 6 | ......_ | 1 | 85 |
| MIMAT0004547 | mmu-miR-203-5p | 3 | _...... | 8 | 85 |
| MIMAT0016995 | mmu-miR-182-3p | 2 | _...... | 7 | 85 |
